Equilibrium Structure of Beryllium Dibromide from Combined Gas Electron Diffraction and Vibrational Spectroscopy Analysis

The molecular structure of BeBr₂ has been investigated by gas-phase electron diffraction at the temperature 800(10) K. The conventional analysis yielded the following values: r _g(Be–Br) = 1.944(6)Å, l(Be–Br) = 0.068(4)Å, r _g(Br–Br) = 3.848(8)Å, l(Br–Br) = 0.109(3)Å, k(Be–Br) = 1.1(1.1) × 10^–5 ų, (Br–Br) = 2.1(1.0) × 10^–5 ų. Three models of nuclear dynamics were used to simulate the conventional analysis values—infinitesimal vibrations and two models, which take into account the kinematic and dynamic anharmonicity of the bending vibration. All models give similar values of bond angle, amplitudes, and shrinkage, excluding the harmonic model, which yields too low value l(Br–Br). The equilibrium bond distance r _e(Be–Br) = 1.932(11) Å was estimated, taking into account the anharmonicity corrections for stretching and bending vibrations and centrifugal distortion.     

1–D Framework l-arginine zinc(II) units bridged by oxalate: synthesis,structure, properties,and theoretical studies

We synthesized a l-arginine containing Zn²⁺ complex and oxalate ions. {[Zn₂(l-Arg)₂(ox)₂]·8H₂O}_n (1) (l-Arg =l-arginine, ox = oxalate) crystallize in the monoclinic space group P2₁ with a = 8.979(2), b = 9.840(2) (Å), c = 18.509(3) (Å), β = 95.58(3) (Å), V = 1627.6(6) ų, and Z = 2. The zinc centers are six-coordinate via one l-arginine zwitterion and two bridging oxalates. The binuclear [Zn₂(l-Arg)₂(ox)₂] units are linked via oxalate and form 1-D “stair-like” linear chains. The complex was characterized using FT-IR, FT-Raman, UV–vis spectroscopy, and thermal analysis techniques, as well as DFT methods. Electronic bands above 31,000 cm^?1 originate in ^1,3A_u (n→π*) transitions within oxalate ions. Theoretical studies were performed for the model compound {[Zn(l-Arg)(Hox)₂]·4H₂O} using the fragment of the crystallographic structure of 1. The interaction energy (ΔE) values for l-arginine and two oxalate ions are comparable at -145 kcal mol^?1. Natural bond orbital (NBO) analysis of the electronic structure and bonding is also discussed.     

A new flavonol glycoside and other flavonoids from the aerial parts of Taverniera aegyptiaca

Isolation of flavonoids from the aerial parts of Taverniera aegyptiaca Bioss. (Fabaceae) led to identification of one new flavonol glycoside, isorhamnetin-3-O-α-l-rhamnopyranosyl-(1→2)-α-l-arabinopyranoside (1), along with eleven compounds, which previously have not been isolated from this plant quercetin-3-O-α-l-rhamnopyranosyl-(1→2)-[α-l-rhamnopyranosyl-(1→6)-β-d-galactopyranoside] (2), isorhamnetin-3-O-α-l-arabinopyranoside (3), quercetin-3-O-α-l-rhamnopyranosyl-(1→6)-β-d-glucopyranoside (4), isorhamnetin-3-O-α-l-rhamnopyranosyl-(1→6)-β-d-glucopyranoside (7), isorhamnetin 3-O-α-l-rhamnopyranosyl-(1→2)-[α-l-rhamnopyranosyl-(1→6)-β-d-galactopyranoside] (8), isorhamnetin 3-O-α-l-rhamnopyranosyl-(1→2)-[α-l-rhamnopyranosyl-(1→6)-β-d-glucopyranoside] (9), kaempferol 3-O-α-l-rhamnopyranosyl-(1→2)-[α-l-rhamnopyranosyl-(1→6)-β-d-galactopyranoside] (10), isorhamnetin (11), 4,4′-dihydroxy-2′-methoxychalcone (12), formononetin (13) and calycosin (15)] and some compounds already known from this plant [quercetin-3-O-robinobioside (5), isorhamnetin-3-O-robinobioside (6), afrormosin (14) and odoratin (16)].     

Study on synthesis of lanthanide chelates of (l)-α-trifluoromethyl-polyfluoroalkyl-β-diketone and their application as chiral shift reagents

The lanthanide chelates of (l)-2, 2-dimethyl-6-trifluoromethyl-7-oxa-6, 8, 8, 9, 9, 10, 10, 10-octafluoro-3, 5-decanedione, Ln [(l)-CF₃CF₂CF₂OCF (CF₃) COCHCOC (CH₃)₃]₃ (l-3a, Ln=Eu; 3b, Ln=Pr), are useful as ¹H NMR shift reagents for direct determination of enantiomeric composition of enantiomorphous alcohols, ketones and amines. With these substrates, l-3a induces shift difference similar to that induced by Eu(facam)₃ and Eu(hfbc)₃. However, due to the higher solubility of the chelates l-3a and l-3b in nonpolar organic solvent such as CHCl₃, CCl₄ and only one ¹H signal from l-3a and l-3b is observed, their application as the new chiral shift reagents seems promising. The spectral nonequivalence is also observed for dimethylsulfoxide in the presence of l-3a.     

Flexibility transitions and looped adsorption of wormlike chains

When deposited from a solution onto a surface, superpolymeric chains display revealing transitions in their apparent stiffness. With simulated chains in adsorption, we varied the backbone rigidity and measured the chain persistence length (l_Pads). As the three‐dimensional persistence length (l_P3) increases toward the contour length, a transition can be seen from l_Pads = l_P2 (i.e., the two‐dimensional persistence length) to l_Pads = l_P3. Looped conformations decrease in frequency with a distinct nonlinear dependence. Finally, comparisons with experiments on polymeric worm micelles and purified neurofilaments demonstrate a simple new method for assessing the flexibility of these novel superpolymers. © 2004 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 43: 280–286, 2005     

On the Sanibel coefficients in the expansion of spin-projected slater determinants

Every Slater determinant D may be uniquely analyzed in terms of spin components D_l = O_lD which are pure spin eigenfunctions, so that S²D_l = l(l+1)D. Every component D_l = O_lD may in turn be written as a sum of symmetric combinations of Slater determinants, T_k = [α^μ?kβ^k‖α^kβ^ν?k], and the coefficients c in the expansion O_lD = ∑_k c T_k are known as the “Sanibel coefficients.” By using the relation S²D_l = l(l+1)D, a recursion formula for the coefficients c is derived, which is then explicitly solved in the special case when S_z has the pure quantum number m = 0.     

Synthesis,Characterization and Crystal Structure of a Ternary Cu(II) Complex with 1,10-Phenanthroline and l-Leucinate

The complex [Cu(l-Leu)(phen)(H₂O)]NO₃ has been synthesized and characterized by elemental analysis, molar conductivity, spectroscopic and X-ray diffraction methods, where phen = 1,10-phenanthroline and l-Leu = l-leucinate. The complex crystallizes in the triclinic space group Pī with two molecules in a unit cell of dimensions a = 7.288(4) Å, b = 11.588(7) Å, c = 12.349(3) Å, α = 86.388(10)^o, β = 76.175(11)°, γ = 72.132(3)°, V = 963.8(10) ų, Z = 2, D _c = 1.564 g/cm³, μ = 1.177 mm^?1, F(000) = 470, R ₁ = 0.0611, and wR ₂ = 0.0711. The copper(II) is ligated in a distorted square-pyramidal geometry by the two nitrogen atoms of phen and the amino nitrogen atom and one carboxylate oxygen atom from each independent l-Leu moiety in the basal plane, and one water oxygen at the apical position. A supramolecular configuration is formed from strong phen-phen stacking interactions between neighboring [Cu(l-leu)(phen)(H₂O)]⁺cations in the crystal.     

Study of geometrical parameters in N-H...N type of hydrogen bonds

Geometrical parameters associated with N-H ... N types of hydrogen bonds have been analysed using crystal structure data on nucleic acids, amino acids and related compounds. Histograms depicting the frequency distribution of N-H ... N length (l) and H-N ... N angle (θ) have been drawn and conclusions on the favoured geometry of such bonds have been arrived at. The distribution ofl shows a pronounced maximum in the range between 2.9? and 3.0? with an overall average of 2.98 ?. The θ distribution shows a pronounced maximum for the hydrogen bond angle in the range 0°-10°, with a rapid fall-off in frequency for nonlinear hydrogen bonds. The frequency shows a cos⁶θ dependence as compared to cos²θ dependence term used earlier to predict the angular dependence of hydrogen bond potential energy in proteins and polypeptides.     

Conformation of comb‐like liquid crystal polymers in isotropic solution probed by small‐angle neutron scattering

The conformational characteristics of a comb‐like side‐chain liquid crystal polysiloxane (SCLCP), dissolved in deuterated chloroform, were evaluated by small‐angle neutron scattering (SANS) measurements over a wide q range. SANS studies were carried out on specimens with constant backbone length (DP = 198) and variable spacer length (n = 3, 5, and 11), and with constant spacer length (n = 5) and variable DP (45, 72, 127, and 198). The form factor P(q) at high q was analyzed using the wormlike chain model with finite cross‐sectional thickness (R_c) and taking into account the molecular weight polydispersity. The analysis generated values of persistence length in the range l_p = 28–32 Å, considerably larger than that of the unsubstituted polysiloxane chain (l_p = 5.8 Å), with contour lengths per monomer comparable to the fully‐extended polysiloxane backbone (l_m = 2.9 Å). This indicates a relatively rigid SCLCP chain due to the influence of the densely attached mesogenic groups. The SCLCP with n = 11 is more flexible (l_p = 28 Å) than those with n = 3 and n = 5 (l_p = 32 Å). The cross‐sectional thickness increases with spacer length, R_c ～ n^0.21±0.02 (3 ≤ n ≤ 11), and the contour length per monomer decreases with increasing spacer length, l_m ～ n^?0.35±0.01. © 2006 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 44: 2412–2424, 2006     

Radical copolymerization of optically active l-menthyl vinyl ether with maleic anhydride,dimethyl maleate,and dimethyl fumarate

The copolymerizations of l-menthyl vinyl ether (l-MVE) with the monomers, that is, maleic anhydride (MAn), dimethyl maleate (DMM), and dimethyl fumarate (DMFu), were undertaken to obtain optically active copolymers. The optically active l-menthyl group in the side chain of copolymers was removed by the ether cleavage reaction with dry-hydrogen bromide gas. The ethercloven copolymers were still optically active. Hence it was concluded that asymmetric carbon atoms were introduced into the copolymer main chain, the reason given being that l-MVE and comonomers (MAn, DMM, and DMFu) made the stereoselective charge-transfer complex one another and copolymerized stereospecifically. From the results of the measurements of optical rotatory dispersion (ORD) and circular dichroism (CD) for copolymers before and after the ether cleavage reaction, the mode of bond opening for α,β-substituted monomers (MAn, DMM, and DMFu) was discussed and the microstructures of copolymers were prepared.     

Intercalation of basic amino acids into layered zirconium proline-<Emphasis Type="Italic">N</Emphasis>-methylphosphonate phosphate

Intercalation of basic amino acids into layered zirconium proline-N-methylphosphonate phosphate (α-ZPMP) was investigated at room temperature. Three kinds of host-guest compounds were prepared and characterised by elemental analysis, inductively coupled plasma analysis (ICP), Fourier transform infrared spectrum (FT-IR), Raman spectrum, X-ray powder diffraction (XRD) and thermoanalysis. The interaction of amino acid guests with P-OH of α-ZPMP host was documented by FT-IR and Raman spectra. In addition, the XRD patterns indicated that l-arginine or l-lysine were intercalated into the interlayer galleries of α-ZPMP host; the interlayer distances of the Larginine and l-lysine intercalation compounds were expanded from 1.520 nm to 2.218 nm and 2.207 nm, respectively. l-arginine and l-lysine would be arranged as a mono-molecule layer in different orientations. The interlayer distance of l-histidine (d = 1.522 nm) was similar to that of α-ZPMP host (d = 1.520 nm), l-histidine might be adsorbed on the outer surface of the α-ZPMP host. Thermoanalysis showed that the intercalated l-arginine and l-lysine were removed at 110–305°C or 150–250°C, respectively, the adsorbed l-histidine was released at a temperature of up to 320°C.     

Density functional study of the l-proline-catalyzed α-aminoxylation of aldehydes reaction: The reaction mechanism and selectivity

The reaction mechanism of the l-proline-catalyzed α-aminoxylation reaction between aldehyde and nitrosobenzene has been investigated using density functional theory (DFT) calculation. Our calculation results reveal following conclusions [1]. The first step that corresponds to the formation of C–O bond, is the stereocontrolling and rate-determining step [2]. Among four reaction channels, the syn-attack reaction channel is more favorable than that of the anti one, and the TS-ss channel dominates among the four channels for this reaction in the step of C–O bond formation [3]. The intermolecular hydrogen bond between the acidic hydrogen of l-proline and the N atom of the nitrosobenzene in an early stage of the process catalyzes very effectively the C–O bond formation by a large stabilization of the negative charge that is developing at the O atom along the electrophilic attack [4]. The effect of solvent decreases the activation energy, and also, the calculated energy barriers are decrease with the enhancement of dielectric constants for C–O bond formation step. These results are in good agreement with experiment, and allow us to explain the origin of the catalysis and stereoselectivity for l-proline-catalyzed α-aminoxylation of aldehyde reaction. The addition of H₂O to substituted imine proline, intermolecular proton-transfer steps, and the l-proline elimination process were also studied in this paper.     

Coordination complexes of l-azetidine-2-carboxylic acid with platinum(II) and palladium(II)

Summary The complexes K[Pt(l-aze)Cl₂, [Pt(l-aze)₂] and [Pd(l-aze)₂] (l-aze = l-azetidine-2-carboxylate) were prepared. X-ray structures show that [Pt(l-aze)₂] and [Pd(l-aze)₂] are isomorphous, having a planar tetragonal geometry with a trans configuration around the Pt and Pd atoms. Slight puckerings of the MN(1)N(11)O(11) chelate ring (M = Pt or Pd) and the azetidine ring were observed. The circular dichroism (c.d.) spectra of the complexes in aqueous solution agree with the structures found in the solid state as far as the hexadecant rule is concerned, giving, for the trans configuration of [M(l-ia)₂] (where ia = imino acid), the profile of the c.d. signs for the three predominant d-d transitions as: +,-,-. I.r., conductivity and n.m.r. measurements are also reported and are in accord with the proposed structures.     

Electrostatic rigidity of polyelectrolytes from reparametrization invariance

The persistence length l_p of a polyelectrolyte chain can be represented as l_p = l_O + l_e where l_O is the bare persistence and I_e is the electrostatic contribution coming from the effects of electrostatic chain self-interactions. Using a reparametrization-invariant path integral model of semiflexible polymers we find that I_e depends on the ionic strength I as I_e ∼ I^−1/2. This result accords with experimental observations and recent Monte Carlo simulations. Reparametrization-invariance is apparently an essential constrainet in selecting acceptable models of semiflexible polymers.     

Angular dependence of Gaussian-Lobe orbitals. II. Set of axial Gaussian-Lobe orbitals

The topological properties of real spherical harmonic representations on the unit sphere have been found to provide a convenient tool to infer the lobe edifices which mimic these orbitals. The prohibitive number of lobes required in such an approach for l > 2, can be avoided in using only axial Gaussian-lobe orbitals (AGLO ). It is proved that 2l + 1 independent Y_lo-like functions correctly span the relevant Y_lm (m = ?l,l) subspace. The multipolar component analysis of any spatial arrangement of lobes is derived, and allows the optimization of the angular dependence of AGLO S. The cases of d- and f-orbitals are studied in detail and accurate optimized functions are proposed. This method can be easily extended to obtain the atomic orbitals of any azimuthal quantum number l-subspace.     

Interpretation of the Electronic Spectra of Ruthenium Nitrosyl Complexes with Nitrogen-containing Heterocyclic Ligands

The electronic absorption spectra of ruthenium nitrosyl complexes with nitrogen-containing heterocyclic ligands were analyzed on the basis of ab initio and CINDO/CI semiempirical calculations of free ligands L and complexes trans-[Ru(NO)(NH₃)₄(L)]^{3 +} (L = pyridine, pyrazine, nicotinamide, isonicotinamide, l-histidine, imidazole). Spectral manifestations of a strong covalent Ru-NO bond were observed to conclude that the oxidation states of Ru and NO in the RuNO^{3 +} group are expedient to represent as Ru(III) and NO⁰. Introduction of a nitrosyl group into the inner coordination sphere of Ru(II) complexes with nitrogen-containing heterocyclic ligands much affects the entire spectral patterns and denudes these ligands of the capacity to exhibit chromophoric properties.     

Multiplication theorems for orthogonal polynomials

In this paper, a general method is presented that allows the derivation of the expansion coefficients of the product of two orthogonal functions provided the generating function is known. For the three classical orthogonal polynomials, the Laguerre, the Hermite, and the Legendre polynomials, the coefficients b_lmn with ?_m?_n = ∑_lb_lmn?_l are derived. © 1993 John Wiley & Sons, Inc.     

Structure and conformation of 1,3-dithlane: an electron diffraction study

A gas-phase electron diffraction study of 1,3-dithiane, carried out at 100° C, has found no statistically significant evidence for the presence of any conformer in the vapor other than the chair, within an estimated uncertainty of 10%. An index of the degree of ring puckering in 1,3-dithiane is the average torsional angle which was found to be 61.3°, appreciably greater than that in cyclohexane, but somewhat less than that in 1,4-dithiane and 1,3,5-trithianc. The C-C-C, C-C-S and S-C-S valency angles, 113.6(33)°, 114.9(4)° and 115.0(3)° respectively, were all larger than the C-C-C valency angles in cyclohexane. The C-S-C valency angle, 98.1(7)°, was slightly smaller than that of dimethyl sulfide. Observed bond lengths were r_g(C-H) = 1.116(10) Å, r_g(C-H) = 1.533(5)Å, and r_g(C-S) = 1. 812(3)Å and mean amplitudes of vibration were l_g(C-H) = 0.081(12)Å, l_g(C-C) = 0.052(6)Å and l_g(C-S) = 0.052(4) Å (parenthesized quantities correspond to 3σ). Curiously, nonbonded distances between the axial hydrogen atoms in 1,3-dithiane are virtually identical to those in cyclohexane, even though these molecules have greatly different bond lengths, valency angles, and torsional angles.     

The molecular structure of selenonyl fluoride,SeO2F2, and sulfuryl fluoride,SO2F2, as determined by gas-phase electron diffraction

The molecular structure of selenonyl fluoride (SeO₂F₂) and sulfuryl fluoride (SO₂F₂) has been studied by gas-phase electron diffraction. The geometries of both molecules are consistent with predictions of VSEPR (valence-shell electron-pair repulsion) theory. The results for the more important distance (r_a), bond angle, and r.m.s. amplitude (l) parameters with estimated uncertainties estimated at 2σ are for SeO₂F₂r(Se = 0) = 1.575 Å (0.002), r(Se-F) = 1.685 Å (0.002), ∠OSeO = 126.2° (0.5), ∠FSeF = 94.1° (0.5), l(Se = 0) = 0.0440 Å (0.0046), l(Se-F) = 0.0472 Å (0.0042), and for SO₂F₂r(S = 0) = 1.397 Å (0.002), r(S-F) = 1.530 Å (0.002), ∠OSO = 122.6° (1.2), ∠FSF = 96.7° (1.1), l(S = 0) = 0.0331 Å (0.0015), l(S-F) = 0.0393 Å (0.0018).     

Determination of the Inductive Constant of the Succinimide Group from the Reaction Series of Thermolysis of Nitro Esters

The inductive constant σ* of the succinimide group was determined using the previously obtained equation correlating the rate constant k _l ofliquid-phase homolysis of the O-NO₂ bond in nitro esters with the σ* constants of electronegative substituents. The kinetics of thermolysis of N-nitroxymethyl- and N-(2-nitroxyethyl)succinimide in the melt and solutions was studied manometrically. Adequate data for k _l were obtained. The σ* constant of the succinimide group was determined to be 4.5. The σ* constants for the phthalimide group and some other imide substituents were determined by a similar procedure.__________Translated from Zhurnal Obshchei Khimii, Vol. 75, No. 6, 2005, pp. 954–957.Original Russian Text Copyright © 2005 by Goncharov, Dubikhin, Nazin, Fedorov, Shastin.