Experimental and computational thermochemical study of barbituric acids: structure-energy relationship in 1,3-dimethylbarbituric acid

This paper reports an experimental and computational thermochemical study on 1,3-dimethylbarbituric acid. The value of the standard (p° = 0.1 MPa) molar enthalpy of formation in the gas phase at T = 298.15 K has been determined. The energy of combustion was measured by static bomb combustion calorimetry, and from the result obtained, the standard molar enthalpy of formation in the crystalline state at T = 298.15 K was calculated as -639.6 ± 1.9 kJ·mol(-1). The enthalpy of sublimation was determined using a transference (transpiration) method in a saturated N(2) stream and a value of the enthalpy of sublimation at T = 298.15 K was derived as 92.3 ± 0.6 kJ·mol(-1). From these results a value of -547.3 ± 2.0 kJ·mol(-1) for the gas-phase enthalpy of formation at T = 298.15 K was determined. Theoretical calculations at the G3 and G4 levels were performed, and a study on molecular and electronic structure of the compound has been carried out. Calculated enthalpies of formation are in very good agreement with the experimental value.     

Experimental and computational thermochemical study of 2- and 3-thiopheneacetic acid methyl esters

Thiophene-based compounds have widespread use in modern drug design, biodiagnostics, electronic and optoelectronic devices, and conductive polymers. The present study reports an experimental and computational thermochemical study on the relative stabilities of 2- and 3-thiopheneacetic acid methyl esters. The enthalpies of combustion and vaporization were measured by a rotating-bomb combustion calorimeter, Calvet microcalorimetry, and correlation gas chromatography, and the gas-phase enthalpies of formation at T=298.15 K were determined. Standard ab initio molecular orbital calculations at the G3 level were performed, and a theoretical study of the molecular and electronic structure of the compounds studied was carried out. Calculated enthalpies of formation, using atomization and isodesmic reactions are in very good agreement with the experimental results.     

Mass-spectrometric study of 2- and 4-thiobarbituric acid derivatives

The mass spectra of 2- and 4-thiobarbituric acids and some of their close analogs at ionizing voltages of 70 and 14 eV are compared. Qualitative and quantitative differences in the behavior of these compounds under the influence of electron impact were established. It is shown that the position of the thione group in the ring and the tautomeric transformations have a substantial effect on the character of the fragmentation of the investigated compounds. The established fragmentation principles make it possible to distinguish the structural isomers in a series of 2- and 4-thiobarbituric acids from their mass spectra.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 4, pp. 529–535, April, 1976.     

Potentiometric and coulometric titration of 2-thiobarbituric acid

A new method for the determination of 2-thiobarbituric acid, using its reaction with iodine in an alkaline medium is presented. In the volumetric titration with potentiometric end-point detection, the determinability range is 10-400 micromol (1.4-58 mg). In coulometric titration using the biamperometric end-point detection, 0.1-20 micromol (1.4 x 10(-2)-2.9 mg) of 2-thiobarbituric acid was successfully determined.     

Monoorganomercury and diorganothallium derivatives of 2-thiobarbituric acid

Compounds of type R_nMH₂Tb (R = Me, Ph; n = 1 (M = Hg), 2 (M = Tl), H₃Tb = 2-thiobarbituric acid) have been prepared, and studied by vibrational (IR and Raman) and NMR (¹H, ¹³C, ¹⁹⁹Hg and ²⁰⁵Tl) spectroscopy. The organomercury derivatives have the metal bound to the deprotonated thiol sulphur atom of the ligand in both the solid state and in DMSO solution. The organothallium compounds, however, while having the metal bound to the sulphur atom and possibly to one of the nitrogen atoms of the ligand pyrimidine ring in the solid state, in DMSO form conducting solutions containing H₂Tb⁻ and R₂Tl⁺ ions.     

Calorimetric and computational thermochemical study of 3,3-tetramethyleneglutaric acid, 3,3-tetramethyleneglutaric anhydride, and 3,3-tetramethyleneglutarimide

The standard (p(o) = 0.1 MPa) molar energies of combustion in oxygen, at T = 298.15 K, of solid 3,3-tetramethyleneglutaric acid and the related 3,3-tetramethyleneglutaric anhydride and 3,3-tetramethyleneglutarimide were measured by static bomb combustion calorimetry. The values of the standard molar enthalpies of sublimation, at T = 298.15 K, were obtained by Calvet microcalorimetry, allowing the calculation of the standard molar enthalpies of formation of the compounds, in the gaseous state, at T = 298.15 K. The geometries of the experimentally studied compounds were fully optimized using density functional theory with the B3LYP functional and extended basis sets. More accurate energies were also obtained from single-point calculations at the most stable B3LYP/6-311G** geometries, using the cc-pVTZ basis set. From these calculations the standard molar enthalpies of formation of 3,3-tetramethyleneglutaric acid, 3,3-tetramethyleneglutaric anhydride, and 3,3-tetramethyleneglutarimide were estimated using isodesmic reactions involving glutaric acid, glutaric anhydride, and glutarimide, respectively. Experimental and computational results were used in the discussion of the interrelation of energetics and structure in these compounds and compared with other structurally related compounds.     

Experimental and computational thermochemical studies of 9-R-xanthene derivatives (ROH,COOH, CONH2)

In the present work, the standard (p° = 0.1 MPa) molar enthalpies of formation of xanthydrol, 9-xanthenecarboxylic acid and 9-xanthenecarboxamide, in the gaseous state, at T = 298.15 K, were determined by experimental and computational studies. The experimental techniques used were the static-bomb combustion calorimetry, which enabled the determination of the standard molar enthalpy of formation, in the crystalline state, and the vacuum drop microcalorimetric and the Knudsen effusion techniques used to derive the enthalpy of sublimation. For comparison purposes, we performed standard ab initio molecular orbital calculations, using the G3(MP2)//B3LYP composite procedure, of the enthalpies of several homodesmotic reactions, allowing to extract the standard molar enthalpies of formation, in the gaseous state, of the three xanthene derivatives considered in this work. The calculated results are in good agreement with the experimental data.     

Experimental and computational study of the pKa of coumaric acid derivatives

The dissociation constant (pK_a) of a drug is a key parameter in drug discovery and pharmaceutical formulation. The hydroxy substituent has a significant effect on the acidity of hydroxycinnamic acid. In this work, the acidic constants of coumaric acids are obtained experimentally by spectrophotometry using the chemometric method and calculated theoretically using ab initio quantum mechanical method at the HF/6‐31G* level of theory in combination with the SMD continuum solvation method. Rank annihilation factor analysis (RAFA) is an efficient chemometric technique based on the elimination of the contribution of one of the chemical components from the data matrix. RAFA cannot be performed because the pure spectrum of HA^? is not available. So, two‐rank annihilation factor analysis (TRAFA) is proposed for the determination of the pK_a OF H₂A. A comparison between the pK_a values obtained previously by TRAFA for the molecules o‐coumaric acid (4.13, 9.58), m‐coumaric acid (4.48, 10.35), and p‐coumaric acid (4.65, 9.92) makes it clear that there is good agreement between the results obtained by TRAFA and ab initio quantum mechanical method.     

Structure-energy relationship in barbituric acid: a calorimetric, computational, and crystallographic study

This paper reports the value of the standard (p(o) = 0.1 MPa) molar enthalpy of formation in the gas phase at T = 298.15 K for barbituric acid. The enthalpies of combustion and sublimation were measured by static bomb combustion calorimetry and transference (transpiration) method in a saturated N2 stream and a gas-phase enthalpy of formation value of -(534.3 +/- 1.7) kJ x mol(-1) was determined at T = 298.15 K. G3-calculated enthalpies of formation are in very good agreement with the experimental value. The behavior of the sample as a function of the temperature was studied by differential scanning calorimetry, and a new polymorph of barbituric acid at high temperature was found. In the solid state, two anhydrous forms are known displaying two out of the six hydrogen-bonding patterns observed in the alkyl/alkenyl derivatives retrieved from the Cambridge Crystallographic Database. The stability of these motifs has been analyzed by theoretical calculations. X-ray powder diffraction technique was used to establish to which polymorphic form corresponds to the commercial sample used in this study and to characterize the new form at high temperature.