Effects of dipole interaction and solvation on the CO stretching band of N,N-dimethylacetamide in nonpolar solutions: Infrared, isotropic and anisotropic Raman measurements

The concentration dependence of the CO stretching (ν_CO) band of N,N-dimethylacetamide (NdMA) in cyclohexane, n-hexane, and CCl₄ has been investigated by infrared (IR) and polarized Raman spectroscopy. For the neat liquid of NdMA, the noncoincidence of the aniso- and isotropic Raman wavenumbers is evident. In the 0.47 M cyclohexane solution of NdMA, the noncoincidence effect almost disappears and the ν_CO envelopes in both the Raman and IR spectra are asymmetric to the low-wavenumber side. When the concentration of NdMA decreases from 0.33 to 0.023 M, the peak of these bands slightly shifts to a higher wavenumber and the band shape becomes symmetric. The shape of the ν_CO envelope does not show any significant change below 0.023 M. These results suggest that the asymmetric shape of the ν_CO band observed for the 0.33 M cyclohexane solution is associated with the intermolecular interaction among NdMA molecules, which vanishes at around 0.02 M. Spectral changes for the CCl₄ solution of NdMA show a similar tendency. However, the shape and peak wavenumber of the ν_CO band observed in a highly diluted CCl₄ solution (≤0.023 M) indicate that the solvation effect of CCl₄ is more complicated than those of cyclohexane and n-hexane. The analyses of the ν_CO band, which is sensitive to the intermolecular interaction between solutes and between solute and solvent for NdMA dissolved in nonpolar solvents, would serve to clarify the electronic property of the molecule in a solution.     

Conformational influences of the polymorphic forms on the CO and C–H stretching modes of five saturated monoacid triglycerides studied by Raman spectroscopy at various temperatures

A study of the vibrational behavior of five saturated monoacid triacylglycerides is performed by Raman spectroscopy at various temperatures in two separate spectral ranges: 1780–1700 and 3100–2650 cm⁻¹. The samples are studied in polycrystalline phase at room temperature, in isotropic liquid phase, and in polycrystalline phase after cooling from the isotropic liquid phase. The CO stretching mode of these triglycerides changes significantly according to the temperature: we observe three components, or an unresolved doublet, or a resolved doublet. The I(2845)/I(2880) ratios (in the C–H stretching spectral region) of the different saturated monoacid triglycerides vary also according to the temperature. The study of these two indicators (the CO stretching mode and the I(2845)/I(2880) ratio) has permitted us to determine the polymorphic forms of the studied triglycerides.     

H NMR Dynamic study of thermal Z/E isomerization of 5-substituted 2-alkylidene-4-oxothiazolidine derivatives: Barriers to rotation about CC bond

The rotational barriers between the configurational isomers of two structurally related push–pull 4-oxothiazolidines, differing in the number of exocyclic CC bonds, have been determined by dynamic ¹H NMR spectroscopy. The equilibrium mixture of (5-ethoxycarbonylmethyl-4-oxothiazolidin-2-ylidene)-1-phenylethanone (1a) in CDCl₃ at room temperature to 333 K consists of the E- and Z-isomers which are separated by an energy barrier ΔG^# 98.5 kJ/mol (at 298 K). The variable-temperature ¹H NMR data for the isomerization of ethyl (5-ethoxycarbonylmethylidene-4-oxothiazolidin-2-ylidene)ethanoate (2b) in DMSO-d₆, possessing the two exocyclic CC bonds at the C(2)- and C(5)-positions, indicate that the rotational barrier ΔG^# separating the (2E,5Z)-2b and (2Z,5Z)-2b isomers is 100.2 kJ/mol (at 298 K). In a polar solvent-dependent equilibrium the major (2Z,5Z)-form (>90%) is stabilized by the intermolecular resonance-assisted hydrogen bonding and strong 1,5-type S · · · O interactions within the SCCCO entity. The ¹³C NMR Δδ_C(2)C(2′) values, ranging from 58 to 69 ppm in 1a–d and 49-58 ppm in 2a–d, correlate with the degree of the push-pull character of the exocyclic C(2)C(2′) bond, which increases with the electron withdrawing ability of the substituents at the vinylic C(2′) position in the following order: COPh COEt > CONHPh > CONHCH₂CH₂Ph. The decrease of the Δδ_C(2)C(2′) values in 2a–d has been discussed for the first time in terms of an estimation of the electron donor capacity of the S fragment on the polarization of the CC bonds.     

Specific crystal structure of poly(3-hydroxybutyrate) thin films studied by infrared reflection–absorption spectroscopy

Infrared reflection–absorption (IR-RAS) and transmission spectra were measured for poly(3-hydroxybutyrate) (PHB) thin films to explore its specific crystal structure in the surface region. As IR-RAS is sensitive to the vibration mode of perpendicular orientation of the surface, differences between IR-RAS and transmission spectra indicate an orientation of the lamella structure in the surface of PHB thin films. The relative intensity of the crystalline CO stretching band in the IR-RAS spectrum is significantly weaker than that in the transmission spectrum. It may be concluded that the transient dipole moment of the CO stretching mode of the crystalline state is not oriented perpendicular but nearly parallel to the substrate surface. On the other hand, the relative intensity of the band at 3009 cm⁻¹ due to the C–H stretching mode of the C–HOC hydrogen bonding is similar between the IR-RAS and transmission spectra, suggesting that the C–H bond is oriented neither perpendicular nor parallel to the substrate surface but in an intermediate direction. Since the CO group of the C–HOC hydrogen bonding is oriented nearly parallel to the surface and its C–H group is in the intermediate direction, it is very likely that the C–HOC hydrogen bonding has a somewhat bent structure. These results are in good agreement with our previous conclusion that the C–HOC hydrogen bonding of PHB exists along the a-axis (not the b-axis) between the CH₃ group of one helix and the CO group of another helix.     

Bonding trends in MCH2 systems: Simple orbital interpretation and evidence for double bonds

MCH₂ systems, where M is a metal from 4th up to 7th period, are studied at DFT level using B3LYP functional and small-core quasirelativistic pseudopotential or fully relativistic four-component methodology. We obtained structural data for 44 elements, M, and our results can be used to infer double-bond lengths for these elements. Our results also suggest that the bonding of these MCH₂ systems can be understood by a simple pictorial approach, even when spin–orbit effects are present.     

Atmospheric chemistry of CF3CFCH2: Products and mechanisms of Cl atom and OH radical initiated oxidation

The products of Cl atom and OH radical initiated oxidation of CF₃CFCH₂ were studied in 700 Torr of N₂/O₂ diluent at 296 ± 1 K. The reactions of Cl atoms and OH radicals with CF₃CFCH₂ proceed via electrophilic addition to the double bond. The reaction with chlorine atoms proceeds 56 ± 5% via addition to the central carbon. The chlorine atom initiated oxidation of CF₃CFCH₂ gives CF₃C(O)F in a molar yield which is indistinguishable from 100% and independent of [O₂], and HC(O)Cl in a molar yield which increased from 30% to 59% as [O₂] was increased from 3 to 700 Torr. The OH radical initiated oxidation of CF₃CFCH₂ gives CF₃C(O)F as major product in a yield of 91 ± 6%. The results are discussed with respect to the atmospheric chemistry and environmental impact of CF₃CFCH₂.     

Copper-catalyzed oxidative cleavage of carbon-carbon double bond of enol ethers with molecular oxygen

A novel CC bond cleavage reaction of aromatic enol ethers (1) to give ketones (2) using molecular oxygen as oxidant is described. Among the examined catalysts (Cu(II), Pd(II), Ru(II), and H⁺), CuCl₂ exhibited the highest activity. The reaction proceeded smoothly with several kinds of substrates.     

Synthesis of N,N-bis(trifluoromethyl)amino difluoromethylene trifluorovinyl ether

The first N-containing trifluorovinyl ether monomer (CF₃)₂NCF₂OCFCF₂ was synthesized. The starting perfluoroalkyl imine CF₃–NCF₂ was converted to the perfluoroalkyl amine (CF₃)₂NH by HF. The amine was converted into the carbamoyl fluoride (CF₃)₂NC(O)F via reaction with carbonyl fluoride COF₂ in the presence of NaF. The carbamoyl fluoride was subjected to catalytic fluorination with molecular F₂ in the presence of CsF to afford the hypofluorite (CF₃)₂NCF₂(OF). The hypofluorite was added to CFClCFCl to provide a saturated halocarbon ether. Dechlorination of the ether with zinc in DMSO resulted in the title monomer. The new vinyl ether monomer readily copolymerizes with TFE.     

DFT study on the unsaturated germylenoid H2CGeNaF

The unsaturated germylenoid H₂CGeNaF was studied by using the DFT B3LYP method in conjunction with the 6-311+G(d, p) basis set. Geometry optimization calculations indicate that H₂CGeNaF has three equilibrium configurations, in which the p-complex is the lowest in energy and is the most stable structure. Two transition states for isomerization reactions of H₂CGeNaF are located and the energy barriers are calculated. For the most stable one, vibrational frequencies and infrared intensities have been predicted.     

Ruthenium carbene complexes containing bidentate and tridentate PO ligands

Treatment of [Ru(CHR)Cl₂(PCy₃)₂] (Cy = cyclohexyl) with Tl[N(Pr₂ⁱPO)₂] and AgL_OEt (L_OEt⁻ = [CpCo{P(O)(OEt)₂}₃]⁻) afforded the Ru carbene complexes [Ru(CHPh)(PCy₃)Cl{N(Pr₂ⁱPO)₂}] (1) and [L_OEtRu(CHR)(PCy₃)Cl] (2), respectively. Chloride abstraction of complex 2 with TlPF₆ in MeCN afforded [L_OEtRu(CHPh)(PCy₃)(MeCN)][PF₆] (3). Complexes 1 and 2 are capable of catalyzing ring-closing metathesis of diethyl 1,2-diallylmalonate. The crystal structure of complex 2 has been determined.     

Clay-anchored non-heme iron-salen complex catalyzed cleavage of CC bond in aqueous medium

Clay-anchored iron[N,N′-ethylenebis(salicylideneaminato)] complex, synthesized by direct exchange, oxidizes various olefins and chalcones in aqueous acetonitrile using hydrogen peroxide as terminal oxidant. Aldehyde and its derivatives are obtained as oxidation products by the cleavage of CC double bond. In comparison with the catalysis by iron-salen complex in solution, the clay catalyzed pathway not only increases the rate of reaction significantly, but also provides selective oxidation toward the aldehyde. Some chalcones also give very good yield in water, compared to the solution and clay catalyzed pathways.     

Weak hydrogen-, halogen- and stacking ππ bonding in crystalline 5-chloro-1-indanone. An analysis by using X-ray diffraction, vibrational spectroscopy and theoretical methods

Intermolecular forces of C–HO, C–Hπ, COCl and ππ types are present in the stable triclinic crystal structure of 5-chloro-1-indanone. They are analysed from a geometrical point of view supported in some extent by the analysis of the vibrational spectrum of the titled compound. Moreover, the molecular structure of the isolated species is calculated by using ab initio as well as density functional theory (DFT) methods together an assortment of basis sets. In order to obtain some information about the influence of intermolecular forces on the molecular structure, the calculated geometries of a free molecule were compared with the experimental solid phase geometry determined by X-ray crystallography.An analysis and assignment of the vibrational spectrum of the 5-chloro-1-indanone is accomplished by using IR and Raman experimental data along with Pulay et al.’s scaled quantum mechanical force field (SQM) methodology starting from the theoretical B3LYP/6-31G(d) and BLYP/6-31G(d) force fields under C_s symmetry.     

Argon matrix effect on the geometry and infrared spectrum of H2CMH2 (M = Ti, Zr, Hf): A theoretical study

Within the framework of polarizable continuum model with integral equation formalism (IEF-PCM), an argon matrix effect on the geometry and infrared frequencies of the agostic H₂CMH₂ (M = Ti, Zr, Hf) methylidene complexes was investigated at B3LYP level of theory with the 6-311++G(3df,3pd) basis set for C, H, and Ti atoms and Stuttgart/Dresden ECPs MWB28 and MWB60 for the Zr and Hf atoms. At the B3LYP/IEF-PCM level of theory, H₂CTiH₂ was optimized to an energy minimum having a pyramidal structure. The calculated dipole moment of this structure is 3.06 D. The B3LYP/IEF-PCM simulations gave the three complexes’ agostic angle ∠HCM (°), distance r(H?M) (Å), and CM bond length r(CM) (Å) as follows: ∠HCTi = 87.4, r(H?Ti) = 2.079, r(CTi) = 1.803; ∠HCZr = 89.3, r(H?Zr) = 2.243, r(CZr) = 1.956; ∠HCHf = 94.7, r(H?Hf) = 2.343, r(CHf) = 1.972. As a comparison, the B3LYP simulations gave the values as follows: ∠HCTi = 91.5, r(H?Ti) = 2.150, r(CTi) = 1.811; ∠HCZr = 92.9, r(H?Zr) = 2.299, r(CZr) = 1.955; ∠HCHf = 95.6, r(H?Hf) = 2.352, r(CHf) = 1.967. As far as the MH₂ symmetric and asymmetric stretching and CH₂ wagging frequencies are concerned, the IEF-PCM calculated values are in better agreement with the experimental argon matrix ones than those calculated based on a gas phase model.     

Homogeneous and supported copper(II) acetate as catalyst for CO coupling reactions

The reactivity of copper(II) acetate as catalyst in a standard CO coupling reaction has been systematically evaluated. Optimization of the reaction conditions resulted in a protocol involving stoichiometric amounts of reagents, a substoichiometric amount of base and 20 mol% catalyst, at 50 °C in 1,2-dichloroethane and under 1 atm O₂. Next, the reactivity of polymer-supported copper(II) acetate was evaluated. Although it is found that, in contrast to previous results obtained in related CN coupling reactions, the polymer-supported catalyst is in this case less efficient than the corresponding homogeneous one, the catalyst turns out to be conveniently recovered from the reaction mixture by simple filtration.     

Wavelength dependence of matrix-assisted laser desorption and ionization using a tunable mid-infrared laser

Matrix-assisted laser desorption and ionization by infrared laser (IR-MALDI) is expected to be an effective methods for soft-ionization of high-molecular weight proteins and intracellular proteins. IR-MALDI is not widely used because its low sensitivity, complexity, high cost, and as it does not work well on commercial MALDI time-of-flight mass spectrometers (TOFMSs). We employed a tunable mid-infrared (MIR) laser as a light source for MALDI to investigate the IR-MALDI. The laser wavelength can be tuned within a range from 5.5 to 10.0 μm, and included several biomaterial group vibration modes. We evaluated the wavelength dependence of ionization in IR-MALDI for four matrices: succinic acid, urea, 3,5-dimethoxy-4-hydroxycinnamic acid (sinapic acid) and 2,5-dihydroxybenzoic acid (DHB). These matrices contained various groups of vibration modes, and absorbed an infrared (IR) energy at a specific wavelength. The mass spectra of angiotensin II was obtained at a specific wavelength corresponding to the CO stretching and benzene ring vibration mode. In IR-MALDI, we considered the strong molecular bond attracting an electron from a neighboring hydrogen atom, possibly protonating the hydrogen atom.     

Intermolecular hydrogen bonding in the binary mixture [(C2H5)2CO + CH3OH] probed by polarized Raman measurements and DFT calculations

The Raman spectra of neat (C₂H₅)₂CO (pentanone) and its binary mixtures with hydrogen donor solvent (CH₃OH), [(C₂H₅)₂CO + CH₃OH] having different mole fractions of the reference system, (C₂H₅)₂CO in the range 0.1-0.9 at a regular interval of 0.1 were recorded in the CO stretching region. In neat liquid, the Raman peak appears asymmetric. The asymmetric nature of the peak has been attributed to the CO stretching mode of the two conformers of (C₂H₅)₂CO having C₂ and C_2v point groups and the corresponding bands at ∼1711 and ∼1718 cm⁻¹, respectively. A careful analysis of the I_iso (isotropic component of the Raman scattered intensity) at different concentrations reveals that upon dilution with methanol, at mole fraction C = 0.6, an additional peak in the CO stretching region is observed at ∼1703 cm⁻¹ which is attributed to the hydrogen bonding with methanol. A peculiar feature in this study is that upon dilution, the peak at ∼1718 cm⁻¹ shows a minimum at C = 0.6, but on further dilution it shows a blue shift. However, the other peak at ∼1711 cm⁻¹ shows a continuous red shift with dilution as well as a maximum at C = 0.7 in the linewidth vs. concentration plot, which is essentially due to competition between motional narrowing and diffusion phenomena. A significant amount of narrowing in the Raman band at ∼1718 cm⁻¹ can be understood in terms of caging effect of the reference molecule by the solvent molecules at high dilution. A density functional theoretic (DFT) calculation on optimized geometries and vibrational frequencies of two conformers of neat (C₂H₅)₂CO in C₂ ad C_2v forms and the complexes with one and two CH₃OH molecules with both the conformers was performed. The experimental results and theoretical calculations together indicate a co-existence of two conformers as well as hydrogen bonded complex with methanol in the binary mixture, [(C₂H₅)₂CO + CH₃OH] at intermediate concentrations.     

DFT study on second-order nonlinear optical properties of the derivatives of 7-vertex cobalt–carborane metallocenyl

Density functional theory (DFT) B3LYP method was employed to calculate electron properties and the second-order nonlinear optical (NLO) responses of the derivatives which were formed by (C₅H₅)Co(C₂B₄H₆) and CHCHC₆H₄NO₂, CHCHC₆H₄NH₂. The results show: when H atom of (C₅H₅)Co(C₂B₄H₆) is substituted by CHCHC₆H₄NO₂, the β_tot values of isomers are all slightly smaller than that of ferrocene (Fc) derivative (FcCHCHC₆H₄NO₂). However, when H atom of (C₅H₅)Co(C₂B₄H₆) is substituted by CHCHC₆H₄NH₂, the β_tot values of isomers are close to that of ferrocene (Fc) derivative (FcCHCHC₆H₄NH₂). It indicates that (C₅H₅)Co(C₂B₄H₆) can be either a donator or an acceptor.     

Effects of dipole interaction and solvation on the CO stretching band of N,N-dimethylacetamide in nonpolar solutions: Infrared, isotropic and anisotropic Raman measurements

The concentration dependence of the CO stretching (ν_CO) band of N,N-dimethylacetamide (NdMA) in cyclohexane, n-hexane, and CCl₄ has been investigated by infrared (IR) and polarized Raman spectroscopy. For the neat liquid of NdMA, the noncoincidence of the aniso- and isotropic Raman wavenumbers is evident. In the 0.47 M cyclohexane solution of NdMA, the noncoincidence effect almost disappears and the ν_CO envelopes in both the Raman and IR spectra are asymmetric to the low-wavenumber side. When the concentration of NdMA decreases from 0.33 to 0.023 M, the peak of these bands slightly shifts to a higher wavenumber and the band shape becomes symmetric. The shape of the ν_CO envelope does not show any significant change below 0.023 M. These results suggest that the asymmetric shape of the ν_CO band observed for the 0.33 M cyclohexane solution is associated with the intermolecular interaction among NdMA molecules, which vanishes at around 0.02 M. Spectral changes for the CCl₄ solution of NdMA show a similar tendency. However, the shape and peak wavenumber of the ν_CO band observed in a highly diluted CCl₄ solution (≤0.023 M) indicate that the solvation effect of CCl₄ is more complicated than those of cyclohexane and n-hexane. The analyses of the ν_CO band, which is sensitive to the intermolecular interaction between solutes and between solute and solvent for NdMA dissolved in nonpolar solvents, would serve to clarify the electronic property of the molecule in a solution.