Infrared and Raman line shapes of dilute HOD in liquid H2O and D2O from 10 to 90 degrees C

A combined electronic structure/molecular dynamics approach was used to calculate infrared and isotropic Raman spectra for the OH or OD stretches of dilute HOD in D2O or H2O, respectively. The quantities needed to compute the infrared and Raman spectra were obtained from density functional theory calculations performed on clusters, generated from liquid-state configurations, containing an HOD molecule along with 4-9 solvent water molecules. The frequency, transition dipole, and isotropic transition polarizability were each empirically related to the electric field due to the solvent along the OH (or OD) bond, calculated on the H (or D) atom of interest. The frequency and transition dipole moment of the OH (or OD) stretch of the HOD molecule were found to be very sensitive to its instantaneous solvent environment, as opposed to the isotropic transition polarizability, which was found to be relatively insensitive to environment. Infrared and isotropic Raman spectra were computed within a molecular dynamics simulation by using the empirical relationships and semiclassical expressions for the line shapes. The line shapes agree well with experiment over a temperature range from 10 to 90 degrees C.     

Polarized infrared and Raman spectra of CsHSeO4 and CsDSeO4 single crystals

The polarized absorption infrared spectra of CsHSeO₄ and CsDSeO₄ single crystals and polarized Raman spectra of the CsHSeO₄ single crystal were measured at room temperature. The polarization features of the internal vibrations of the HSeO⁻₄ ions are predicted on the basis of the X-ray structure assuming strong couping between the vibrations of the two shortest Se---O bonds and an intermediate Se---O bond. The bending methods γOH and δOH of a hydrogen bond appear at 805 cm⁻ and 1258 cm⁻¹, respectively. The νOH absorption has the ABC structure due to Fermi resonance of νOH with the overtones of the δOH and γOH vibrations. A similar shape of the νOH band is observed in the Raman spectra. The νOD absorption has a different shape from that of νOH. Intra-chain coupling was observed for the νOH and νOD vibrations.     

Theoretical study of the changes in the vibrational characteristics arising from the hydrogen bonding between Vitamin C (L-ascorbic acid) and H2O

The vibrational characteristics (vibrational frequencies, infrared intensities and Raman activities) for the hydrogen-bonded system of Vitamin C (L-ascorbic acid) with five water molecules have been predicted using ab initio SCF/6-31G(d,p) calculations and DFT (BLYP) calculations with 6-31G(d,p) and 6-31++G(d,p) basis sets. The changes in the vibrational characteristics from free monomers to a complex have been calculated. The ab initio and BLYP calculations show that the complexation between Vitamin C and five water molecules leads to large red shifts of the stretching vibrations for the monomer bonds involved in the hydrogen bonding and very strong increase in their IR intensity. The predicted frequency shifts for the stretching vibrations from Vitamin C taking part in the hydrogen bonding are up to -508 cm(-1). The magnitude of the wavenumber shifts is indicative of relatively strong OH...H hydrogen-bonded interactions. In the same time the IR intensity and Raman activity of these vibrations increase upon complexation. The IR intensity increases dramatically (up to 12 times) and Raman activity increases up to three times. The ab initio and BLYP calculations show, that the symmetric OH vibrations of water molecules are more sensitive to the complexation. The hydrogen bonding leads to very large red shifts of these vibrations and very strong increase in their IR intensity. The asymmetric OH stretching vibrations of water, free from hydrogen bonding are less sensitive to the complexation than the hydrogen-bonded symmetric OH stretching vibrations. The increases of the IR intensities for these vibrations are lower and red shifts are negligible.     

IR, 1H NMR, mass, XRD and TGA/DTA investigations on the ciprofloxacin/iodine charge-transfer complex

Raman and infrared spectra of two polymorphous minerals with the chemical formula Fe3+(SO4)(OH)·2H2O, monoclinic butlerite and orthorhombic parabutlerite, are studied and the spectra assigned. Observed bands are attributed to the (SO4)2- stretching and bending vibrations, hydrogen bonded water molecules, stretching and bending vibrations of hydroxyl ions, water librational modes, Fe-O and Fe-OH stretching vibrations, Fe-OH bending vibrations and lattice vibrations. The O-H?O hydrogen bond lengths in the structures of both minerals are calculated from the wavenumbers of the stretching vibrations. One symmetrically distinct (SO4)2- unit in the structure of butlerite and two symmetrically distinct (SO4)2- units in the structure of parabutlerite are inferred from the Raman and infrared spectra. This conclusion agrees with the published crystal structures of both mineral phases.     

Synthesis and vibrational spectroscopic characterisation of synthetic hydrozincite and smithsonite

Hydrozincite and smithsonite were synthesised by controlling the partial pressure of CO₂. Previous crystallographic studies concluded that the structure of hydrozincite was a simple one. However both Raman and infrared spectroscopy show that this conclusion is questionable. Multiple bands are observed in both the Raman and infrared spectra in the (CO₃)²⁻ antisymmetric stretching and bending regions of hydrozincite showing that the symmetry of the carbonate anion is reduced and in all probability the carbonate anions are not equivalent in the hydrozincite structure. Multiple OH stretching vibrations centred in both the Raman and infrared spectra show that the OH units in the hydrozincite structure are non-equivalent. The Raman spectrum of synthetic smithsonite is a simple spectrum characteristic of carbonate with Raman bands observed at 1408, 1092 and 730 cm⁻¹.     

Theoretical study of the polarized infrared spectra of the hydrogen bond in 2‐furoic acid crystal dimer

This work presents a theoretical simulation of ν_{O? H} and ν_{O? D} band shapes in the polarized infrared spectra of 2‐furoic acid dimer crystals measured at liquid‐nitrogen temperature. The line shapes are studied theoretically within the framework of the anharmonic couplings between low‐frequency hydrogen‐bond vibrations and degenerate excited states of high‐frequency hydrogen vibrations in hydrogen‐bonded dimers and the anharmonic coupling between the first excited state of the fast mode and the harmonics or band combinations of some low‐frequency bending modes, which lead to Fermi resonances.This approach takes into account the adiabatic approximation, the intrinsic anharmonicity of the low‐frequency mode through a Morse potential, Davydov coupling triggered by resonance exchange between the excited states of the fast modes of the two hydrogen bonds involved in the cyclic dimer, and the direct and indirect damping of the fast‐stretching modes of the hydrogen bonds and of the bending modes. The infrared spectral density was calculated within the linear response theory by Fourier transform of the autocorrelation function of the transition dipole moment operator of the fast mode. Numerical results show that mixing of all these effects allows satisfactory reproduction of the main features of the experimental IR line shapes of crystalline H‐ and D‐bonded 2‐furoic acid at liquid‐nitrogen temperature and for different polarizations. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2012     

Raman, infrared and XPS study of bamboo phytoliths after chemical digestion

Many phosphate containing minerals are found in the Jenolan Caves. Such minerals are formed by the reaction of bat guano and clays from the caves. Among these cave minerals is the mineral taranakite (K,NH(4))Al(3)(PO(4))(3)(OH)·9(H(2)O) which has been identified by X-ray diffraction. Jenolan Caves taranakite has been characterised by Raman spectroscopy. Raman and infrared bands are assigned to H(2)PO(4), OH and NH stretching vibrations. By using a combination of XRD and Raman spectroscopy, the existence of taranakite in the caves has been proven.     

Dynamical and structural aspects of water in potassium ferrocyanide trihydrate

The present work reviews a systematic spectroscopic investigation of water in the single crystal K₄Fe(CN)₆ · 3H₂O (KFCT) and its isotopic solid solutions. On the basis of precise polarization measurements of Raman spectra and infrared studies, the positions of the OH(OD) oscillators in the ordered crystal state (T < 150 K) are determined. Overtones and combinations of water vibrations in the near infrared region are studied that allow for the evalution of the coupling and anharmonicity constants of the modes. The isotopic dilution technique is used in order to investigate the influence of intra- and intermolecular interactions on the OH(OD) vibrations. Information about the distortion of the water molecules, as well as many correlations between spectral parameters of OH(OD) stretchings and structural characteristics of H bonds in KFCT, are derived. As a result, a complete picture of the vibrational dynamics and the structure of the crystallization water in KFCT is obtained.     

Vibrational spectroscopic study of the antimonate mineral bindheimite Pb2Sb2O6(O,OH)

Raman spectroscopy complimented with infrared spectroscopy has been used to characterise the antimonate mineral bindheimite Pb₂Sb₂O₆(O,OH). The mineral is characterised by an intense Raman band at 656 cm⁻¹ assigned to SbO stretching vibrations. Other lower intensity bands at 664, 749 and 814 cm⁻¹ are also assigned to stretching vibrations. This observation suggests the non-equivalence of SbO units in the structure. Low intensity Raman bands at 293, 312 and 328 cm⁻¹ are assigned to the OSbO bending vibrations. Infrared bands at 979, 1008, 1037 and 1058 cm⁻¹ may be assigned to δOH deformation modes of SbOH units. Infrared bands at 1603 and 1640 cm⁻¹ are assigned to water bending vibrations, suggesting that water is involved in the bindheimite structure. Broad infrared bands centred upon 3250 cm⁻¹ supports this concept. Thus the true formula of bindheimite is questioned and probably should be written as Pb₂Sb₂O₆(O,OH,H₂O).     

Vibrational spectroscopy of the sorosilicate mineral hemimorphite Zn4(OH)2Si2O7 · H2O

Raman spectroscopy complimented by infrared spectroscopy has been used to study the mineral hemimorphite from different origins. The Raman spectra show consistently similar spectra with only one sample showing additional bands due to the presence of smithsonite. Raman bands observed at 3510–3565 and 3436–3455 cm⁻¹ are assigned to OH stretching vibrations. Using a Libowitzky type formula, these OH bands provide hydrogen bond distances of 0.2910, 0.2825, 0.2762 and 0.2716 pm. Water bending modes are observed in the Raman spectrum at 1633 cm⁻¹. An intense Raman band at 930 cm⁻¹ is attributed to SiO symmetric stretching vibration of the Si₂O₇ units. Raman bands observed at 451 and 400 cm⁻¹are attributed to out-of-plane bending vibrations of the Si₂O₇ units. Raman bands at 330, 280, 168 and 132 cm⁻¹ are assigned to ZnO and OZnO vibrations.     

Vibrational spectroscopic study of hydrated uranyl oxide: Curite

Raman and infrared spectra of the uranyl oxyhydroxide hydrate: curite is reported. Observed bands are attributed to the (UO₂)²⁺ stretching and bending vibrations, U–OH bending vibrations, H₂O and (OH)⁻ stretching, bending and librational modes. U–O bond lengths in uranyls and O–H…O bond lengths are calculated from the wavenumbers assigned to the stretching vibrations. These bond lengths are close to the values inferred and/or predicted from the X-ray single crystal structure. The complex hydrogen-bonding network arrangement was proved in the structures of the curite minerals. This hydrogen bonding contributes to the stability of these uranyl minerals.     

Combined electronic structure/molecular dynamics approach for ultrafast infrared spectroscopy of dilute HOD in liquid H2O and D2O

We present a new approach that combines electronic structure methods and molecular dynamics simulations to investigate the infrared spectroscopy of condensed phase systems. This approach is applied to the OH stretch band of dilute HOD in liquid D2O and the OD stretch band of dilute HOD in liquid H2O for two commonly employed models of water, TIP4P and SPC/E. Ab initio OH and OD anharmonic transition frequencies are calculated for 100 HOD x (D2O)n and HOD x(H2O)n (n = 4-9) clusters randomly selected from liquid water simulations. A linear empirical relationship between the ab initio frequencies and the component of the electric field from the solvent along the bond of interest is developed. This relationship is used in a molecular dynamics simulation to compute frequency fluctuation time-correlation functions and infrared absorption line shapes. The normalized frequency fluctuation time-correlation functions are in good agreement with the results of previous theoretical approaches. Their long-time decay times are 0.5 ps for the TIP4P model and 0.9 ps for the SPC/E model, both of which appear to be somewhat too fast compared to recent experiments. The calculated line shapes are in good agreement with experiment, and improve upon the results of previous theoretical approaches. The methods presented are simple, and transferable to more complicated systems.     

Raman spectroscopic study of the hydrotalcite desautelsite Mg6Mn2CO3(OH)16 x 4H2O

The structure of the hydrotalcite desautelsite Mg6Mn2CO3(OH)16.4H2O has been studied by a combination of Raman and infrared spectroscopy. Three intense Raman bands are observed at 1086, 1062 and 1055 cm(-1). A model based upon the observation of three CO3 stretching vibrations is presented. The CO3 anion may be (a) non-hydrogen bonded, (b) hydrogen bonded to the interlayer water and (c) hydrogen bonded to the brucite-like hydroxyl surface. Two intense bands at 3646 and 3608 cm(-1) are attributed to MgOH and MnOH stretching vibrations. Infrared bands at 3476, 3333, 3165 and 2991 cm(-1) are assigned to water stretching bands. Raman spectroscopy has proven a powerful tool for the study of hydrotalcite minerals.     

Polarized infrared and Raman spectra of a CsHSO4 single crystal

The polarized absorption infrared (IR) and polarized Raman spectra of a CsHSO₄ single crystal at room temperature are presented and discussed in relation to the X-ray crystal structure. Breakdown of the selection rules for the X-ray determined C_2h factor group is observed. The vibrational factor group appears to be C₂. This implies C₁ site symmetry for the SO²⁻₄ ions. The polarization features of the HSO⁻₄ ion vibrations are predicted assuming that the longest S---OH bond vibrates independently of the SO₃ group vibrations. The ABC structure of the IR and Raman band arising from the νOH stretching vibration is explained on the basis of Fermi resonance.     

Raman spectroscopy of stercorite H(NH4)Na(PO4)·4H2O--a cave mineral from Petrogale Cave, Madura, Eucla, Western Australia

Raman spectroscopy complimented with infrared spectroscopy has been used to characterise the mineral stercorite H(NH4)Na(PO4)·4H2O. The mineral stercorite originated from the Petrogale Cave, Madura, Eucla, Western Australia. This cave is one of many caves in the Nullarbor Plain in the South of Western Australia. These caves have been in existence for eons of time and have been dated at more than 550 million years old. The mineral is formed by the reaction of bat guano chemicals on calcite substrates. A single Raman band at 920 cm(-1) defines the presence of phosphate in the mineral. Antisymmetric stretching bands are observed in the infrared spectrum at 1052, 1097, 1135 and 1173 cm(-1). Raman spectroscopy shows the mineral is based upon the phosphate anion and not the hydrogen phosphate anion. Raman and infrared bands are found and assigned to PO4(3-), H2O, OH and NH stretching vibrations. The detection of stercorite by Raman spectroscopy shows that the mineral can be readily determined; as such the application of a portable Raman spectrometer in a 'cave' situation enables the detection of minerals, some of which may remain to be identified.     

An infrared and Raman spectroscopic study of natural zinc phosphates

Zinc phosphates are important in the study of the phosphatisation of metals. Raman spectroscopy in combination with infrared spectroscopy has been used to characterise the zinc phosphate minerals. The minerals may be characterised by the patterns of the hydroxyl stretching vibrations in both the Raman and infrared spectra. Spencerite is characterised by a sharp Raman band at 3516 cm(-1) and tarbuttite by a single band at 3446 cm(-1). The patterns of the Raman spectra of the hydroxyl stretching region of hopeite and parahopeite are different in line with their differing crystal structures. The Raman spectrum of the PO4 stretching region shows better band separated peaks than the infrared spectra which consist of a complex set of overlapping bands. The position of the PO4 symmetric stretching mode can be used to identify the zinc phosphate mineral. It is apparent that Raman spectroscopy lends itself to the fundamental study of the evolution of zinc phosphate films.     

Vibrational analysis of sodium α-, β- and γ-hydroxybutyrates. Inter- and intramolecular hydrogen bonds

The infrared and Raman spectra of sodium α-, β- and γ-hydroxybutyrates and their deuterated analogues are examined in the 4000-100 cm⁻¹ range and an assignment of the fundamental vibrations is given. Based on the localization of the asymmetric stretching vibrations ν_asOH and the out-of-plane vibration γOH, inter- and/or intramolecularly hydrogen-bonded forms are proposed: the low frequencies of ν_asOH (<3200 cm⁻¹) and high frequencies of γOH (≈800 cm⁻¹) argue in favour of the existence of intramolecular hydrogen bonding. Sodium α-hydroxybutyrate exhibits as a chelate ring with an intramolecular hydrogen bond between hydroxyl and carboxyl groups, whereas sodium, β-hydroxybutyrate has the two association forms with inter- and intramolecular hydrogen bonds. Sodium γ-hydroxybutyrate exists as a hydrogen-bonded polymer, with an intermolecular hydrogen bond between the hydroxyl groups and between the hydroxyl and carbonyl groups. At a crystallization temperature above 50°C, only the α- salt showed a structural change indicating the existence of intra- and intermolecular hydrogen bonds. This result is confirmed by differential scanning analysis.     

Near-infrared spectroscopy of natural alunites

Near-infrared spectroscopy (NIR) has been used to analyse alunites of formula K(Al3+)6(SO4)4(OH)12. Whilst the spectra of the alunites shows a common pattern differences in the spectra are observed which enable the minerals to be distinguished. These differences are attributed to subtle variations in alunite composition. The NIR bands in the 6300-7000 cm(-1) region are attributed to the first fundamental overtone of both the infrared and Raman hydroxyl stretching vibrations. A set of bands are observed in the 4700-5500 cm(-1) region which are assigned to combination bands of the hydroxyl stretching and deformation vibrations. NIR spectroscopy has the ability to distinguish between the alunite minerals even when the formula of the minerals is closely related. The NIR spectroscopic technique has great potential as a mineral exploratory tool on planets and in particular Mars.     

Raman spectroscopic study of the uranyl minerals vanmeersscheite U(OH)4[(UO2)3(PO4)2(OH)2].4H2O and arsenouranylite Ca(UO2)[(UO2)3(AsO4)2(OH)2].(OH)2.6H2O

Raman and infrared spectra of secondary uranyl phosphate vanmeersscheite and Raman spectrum of secondary uranyl arsenate arsenuranylite were recorded and interpreted, and the spectra related to the structure of the minerals. Observed bands were attributed to the stretching and bending vibrations of uranyl, phosphate and/or arsenate units and OH (H(2)O and OH(-)) units. Phosphuranylite sheet topology is characteristic for both minerals. U-O bond lengths in uranyl were calculated from the spectra and compared with those inferred for vanmeersscheite from the X-ray single crystal structure analysis. O-H...O hydrogen bonds in both minerals were also inferred using the Libowitzky empirical relation.     

NIR spectroscopy of jarosites

Near-infrared (NIR) spectroscopy has been used to analyse a suite of synthesised jarosites of formula Mn(Fe3+)6(SO4)4(OH)12 where M is K, Na, Ag, Pb, NH4+ and H3O+. Whilst the spectra of the jarosites show a common pattern, differences in the spectra are observed which enable the minerals to be distinguished. The NIR bands in the 6300-7000 cm-1 region are attributed to the first fundamental overtone of the infrared and Raman hydroxyl stretching vibrations. The NIR spectrum of the ammonium-jarosite shows additional bands at 6460 and 6143 cm-1, attributed to the first fundamental overtones of NH stretching vibrations. A set of bands are observed in the 4700-5500 cm-1 region which are assigned to combination bands of the hydroxyl stretching and deformation vibrations. The ammonium-jarosite shows additional bands at 4730 and 4621 cm-1, attributed to the combination of NH stretching and bending vibrations. NIR spectroscopy has the ability to distinguish between the jarosite minerals even when the formula of the minerals is closely related. The NIR spectroscopic technique has great potential as a mineral exploratory tool on planets and in particular Mars.