Quantum effects in photosynthesis

In photosynthesis light is absorbed by the light-harvesting antenna and within several tens of picoseconds transferred to the photosynthetic reaction center (RC) where an ultrafast charge separation is initiated. Photosynthetic purple bacteria employ a single reaction center. In contrast, in photosynthesis of plants, algae and cyanobacteria, two reaction centers, Photosystem II (PSII) and Photosystem I (PSI), operate in series. PSII uses light to extract electrons from water (to produce oxygen); PSI uses light to reduce NADP + to NADPH. The electron transfer from PSII to PSI is coupled to the build-up of a proton motive force (pmf) that is used to form ATP. NADPH and ATP are required in the Calvin-Benson cycle to produce a reduced sugar. In the following we will discuss photosynthetic charge separation and photosynthetic light-harvesting with an emphasis on the role of quantum mechanics.     

Characterization of low-energy chlorophylls in the PSI-LHCI supercomplex from Chlamydomonas reinhardtii. A site-selective fluorescence study

Almost all photosystem I (PSI) complexes from oxygenic photosynthetic organisms contain chlorophylls that absorb at longer wavelength than that of the primary electron donor P700. We demonstrate here that the low-energy pool of chlorophylls in the PSI-LHCI complex from the green alga Chlamydomonas reinhardtii, containing five to six pigments, is significantly blue-shifted (A(max) at 700 nm at 4 K) compared to that in the PSI core preparations from several species of cyanobacteria and in PSI-LHCI particles from higher plants. This makes them almost isoenergetic with the primary donor. However, they keep the other characteristic features of "red" chlorophylls: clear spectral separation from the bulk chlorophylls, big Stokes shift revealing pronounced electron-phonon coupling, and large homogeneous and inhomogeneous broadening of approximately 170 and approximately 310 cm(-1), respectively.     

Electrochemical approach to the development of a photoelectrode on the basis of photosynthetic reaction centers

Experimental approaches to the coupling of photoinduced charge separation in reaction centers (RCs) of the photosynthetic bacterium Rhodobacter sphaeroides R-26 with electron transfer to an electrode are discussed. Exogenous quinones are used as an electron transfer mediator. With the use of photopolarography it is shown that water-soluble ubiquinone can serve as a diffusionally mobile mediator of electron transfer. Some methods of quinone immobilization at an electrode have been developed to obtain a non-diffusional mediator of electron transfer. Quasi-reversible electrochemical kinetics were observed for aminonaphthoquinone immobilized as a monolayer at a Pt electrode. The ubiquinone-depleted RCs were subjected to affinity immobilization at these chemically modified electrodes probably due to the insertion of the immobilized quinone into the primary quinone Q_A binding site. The quantum efficiency of photocurrent formation was ca. 5% for the photoelectrode obtained. The electrochemical process of the immobilized quinone is shown to be the stage that limits electron transfer from RCs to the electrode.     

Role for bound water and CH-pi aromatic interactions in photosynthetic electron transfer

Photosystem I (PSI) is one of two photosynthetic reaction centers present in plants, algae, and cyanobacteria and catalyzes the reduction of ferredoxin and the oxidation of cytochrome c or plastocyanin. The PSI primary chlorophyll donor, which is oxidized in the primary electron-transfer events, is a heterodimer of chl a and a' called P700. It has been suggested that protein relaxation accompanies light-induced electron transfer in this reaction center (Dashdorj, N.; Xu, W.; Martinsson, P.; Chitnis, P. R.; Savikhin, S. Biophys. J. 2004, 86, 3121. Kim, S.; Sacksteder, C. A.; Bixby, K. A.; Barry, B. A. Biochemistry 2001, 40, 15384). To investigate the details of electron transfer and relaxation events in PSI, we have employed several experimental approaches. First, we report a pH-dependent viscosity effect on P700+ reduction; this result suggests a role for proton transfer in the PSI electron-transfer reactions. Second, we find that changes in hydration alter the rate of P700+ reduction and the interactions of P700 with the protein environment. This result suggests a role for bound water in electron transfer to P700+. Third, we present evidence that deuteration of the tyrosine aromatic side chain perturbs the vibrational spectrum, associated with P700+ reduction. We attribute this result to a linkage between CH-pi interactions and electron transfer to P700+.     

Efficient energy transfer from the long-wavelength antenna chlorophylls to P700 in photosystem I complexes from Spirulina platensis

To study the role of the long-wavelength chlorophylls (Chl) in photosystem I (PSI), the action spectra of P700 photooxidation at 293 and 77 K have been measured for PSI trimeric and monomeric complexes isolated from Spirulina platensis. The long-wavelength Chls which absorb in the region 710dash740 nm transfer excitation energy to the reduced P700 with the same efficiency as bulk antenna Chls, causing the oxidation of P700. The relative quantum yield of P700 photooxidation is about unity (293-77 K) even under the direct excitation of Chl absorbing at 735 nm (Chl735). At 77 K Chl735 exhibits a fluorescence band at 760 nm (F760) whose intensity is quenched under illumination of the PSI trimeric complexes from Spirulina. The relative quantum yield of F760 quenching is not dependent on the wavelength of excitation in the region 620–750 nm. Since the value of the overlap integral between the band of F760 and the absorption band of the cation radical of P700 (P700⁺) is higher than that of the P700 band, it is suggested that Chl735 transfers energy to P700⁺ more efficiently than to reduced P700; energy transfer to P700⁺ causes the quenching of F760. A linear relationship between the photooxidation rate of P700 and the fraction of P700⁺ at 293 K indicates that the energy exchange between PSI subunits of the trimer is negligible. Thus, the antenna of PSI trimers of Spirulina is organized in separate photosynthetic units.     

Biohybrid photosynthetic charge accumulation detected by flavin semiquinone formation in ferredoxin-NADP+ reductase

Flavin chemistry is ubiquitous in biological systems with flavoproteins engaged in important redox reactions. In photosynthesis, flavin cofactors are used as electron donors/acceptors to facilitate charge transfer and accumulation for ultimate use in carbon fixation. Following light-induced charge separation in the photosynthetic transmembrane reaction center photosystem I (PSI), an electron is transferred to one of two small soluble shuttle proteins, a ferredoxin (Fd) or a flavodoxin (Fld) (the latter in the condition of Fe-deficiency), followed by electron transfer to the ferredoxin-NADP⁺ reductase (FNR) enzyme. FNR accepts two of these sequential one electron transfers, with its flavin adenine dinucleotide (FAD) cofactor becoming doubly reduced, forming a hydride which is then passed onto the substrate NADP⁺ to form NADPH. The two one-electron potentials (oxidized/semiquinone and semiquinone/hydroquinone) are similar to each other with the FNR protein stabilizing the hydroquinone, making spectroscopic detection of the intermediate semiquinone state difficult. We employed a new biohybrid-based strategy that involved truncating the native three-protein electron transfer cascade PSI → Fd → FNR to a two-protein cascade by replacing PSI with a molecular Ru(ii) photosensitizer (RuPS) which is covalently bound to Fd and Fld to form biohybrid complexes that successfully mimic PSI in light-driven NADPH formation. RuFd → FNR and RuFld → FNR electron transfer experiments revealed a notable distinction in photosynthetic charge accumulation that we attribute to the different protein cofactors [2Fe2S] and flavin. After freeze quenching the two-protein systems under illumination, an intermediate semiquinone state of FNR was readily observed with cw X-band EPR spectroscopy. The increased spectral resolution from selective deuteration allowed EPR detection of inter-flavoprotein electron transfer. This work establishes a biohybrid experimental approach for further studies of photosynthetic light-driven electron transfer chain that culminates at FNR and highlights nature''s mechanisms that couple single electron transfer chemistry to charge accumulation, providing important insight for the development of photon-to-fuel schemes.

One electron at a time, photosynthetic biohybrids enable charge accumulation via the flavin semiquinone of ferredoxin-NADP⁺ reductase.     

Short range photoinduced electron transfer in proteins: QM-MM simulations of tryptophan and flavin fluorescence quenching in proteins

Hybrid quantum mechanical-molecular mechanics (dynamics) were performed on flavin reductase (Fre) and flavodoxin reductase (Fdr), both from Escherichia coli. Each was complexed with riboflavin (Rbf) or flavin mononucleotide (FMN). During 50 ps trajectories, the relative energies of the fluorescing state (S₁) of the isoalloxazine ring and the lowest charge transfer state (CT) were assessed to aid prediction of fluorescence lifetimes that are shortened due to quenching by electron transfer from tyrosine. The simulations for the four cases display a wide range in CT–S₁ energy gap caused by the presence of phosphate, other charged and polar residues, water, and by intermolecular separation between donor and acceptor. This suggests that the Gibbs energy change (ΔG₀) and reorganization energy (λ) for the electron transfer may differ in different flavoproteins.     

FREE ENERGY DEPENDENCE OF THE QUENCHING OF CHLOROPHYLL a FLUORESCENCE BY SUBSTITUTED QUINONES*

The quenching of chlorophyll a (Chl a) fluorescence hy a series of substituted benzoquinones. naphthoquinones and anthraquinones has been examined employing ethanol and acetonitrile as solvents. All quinones are good quenchers of fluorescence. There is an excellent linear relation between the Stern-Volmer quenching constants, K, and the polarographic half wave potentials (E₁₂) of the quinones, with more oxidizing quinones being better quenchers. The quenching data are consistent with the excited state half wave potential of ?1.31 eV predicted theoretically, demonstrating that the kinetically estimated value of the Chl a excited state reduction potential agrees with that expected on spectroscopic grounds. The results of quenching are not in agreement with the conventional Marcus theory of electron-transfer reactions, as there is no evidence of quenching constant. K_q. decrease vsΔG⁰ even for free energy changes nearly twice that expected for the onset of the Marcus inverted region. However, the kinetically estimated K_q values are in good agreement with the ones calculated by using the Rehm and Weller equation for fluorescence quenching by electron transfer. Our experimental results support the electron transfer mechanism of quenching proposed by Seely.     

Cyclic Tetramers of Zinc Chlorophylls as a Coupled Light‐Harvesting Antenna–Charge‐Separation System

A coupled light‐harvesting antenna–charge‐separation system, consisting of self‐assembled zinc chlorophyll derivatives that incorporate an electron‐accepting unit, is reported. The cyclic tetramers that incorporated an electron acceptor were constructed by the co‐assembly of a pyridine‐appended zinc chlorophyll derivative, ZnPy , and a zinc chlorophyll derivative further decorated with a fullerene unit, ZnPyC₆₀ . Comprehensive steady‐state and time‐resolved spectroscopic studies were conducted for the individual tetramers of ZnPy and ZnPyC₆₀ as well as their co‐tetramers. Intra‐assembly singlet energy transfer was confirmed by singlet–singlet annihilation in the ZnPy tetramer. Electron transfer from the singlet chlorin unit to the fullerene unit was clearly demonstrated by the transient absorption of the fullerene radical anion in the ZnPyC₆₀ tetramer. Finally, with the co‐tetramer, a coupled light‐harvesting and charge‐separation system with practically 100 % quantum efficiency was demonstrated.     

Structure of the P700(+ )A1(-) radical pair intermediate in photosystem I by high time resolution multifrequency electron paramagnetic resonance: analysis of quantum beat oscillations.

The geometry of the secondary radical pair P700(+)A1(-), in photosystem I (PSI) from the deuterated and 15N-substituted cyanobacterium Synechococcus lividus, has been determined by high time resolution electron paramagnetic resonance (EPR), performed at three different microwave frequencies. Structural information is extracted from light-induced quantum beats observed in the transverse magnetization of P700(+)A1(-) at early times after laser excitation. A computer analysis of the two-dimensional Q-band experiment provides the orientation of the various magnetic tensors of with respect to a magnetic reference frame. The orientation of the cofactors of the primary donor in the g-tensor system of is then evaluated by analyzing time-dependent X-band EPR spectra, extracted from a two-dimensional data set. Finally, the cofactor arrangement of P700(+)A1(-) in the photosynthetic membrane is deduced from angular-dependent W-band spectra, observed for a magnetically aligned sample. Thus, the orientation of the g-tensor of P700(+) with respect to a chlorophyll based reference system could be determined. The angle between the g1(z) axis and the chlorophyll plane normal is found to be 29 +/- 7 degrees, while the g1(y) axis lies in the chlorophyll plane. In addition, a complete structural model for the reduced quinone acceptor, A1(-), is evaluated. In this model, the quinone plane of is found to be inclined by 68 +/- 7 degrees relative to the membrane plane, while the P700(+)-A1(-) axis makes an angle of 35 +/- 6 degrees with the membrane normal. All of these values refer to the charge separated state, observed at low temperatures, where forward electron transfer to the iron-sulfur centers is partially blocked. Preliminary room temperature studies of P700(+)A1(-), employing X-band quantum beat oscillations, indicate a different orientation of A1(-) in its binding pocket. A comparison with crystallographic data provides information on the electron-transfer pathway in PSI. It appears that quantum beats represent excellent structural probes for the short-lived intermediates in the primary energy conversion steps of photosynthesis.     

Destabilization of the Oxygen Evolving Complex of Photosystem II by Al3+

The inhibitory effect of Al³⁺ on photosynthetic electron transport was investigated in isolated thylakoid membranes of spinach. A combination of oxygen evolution, chlorophyll fluorescence induction (FI) and decay and thermoluminescence measurements have been used to characterize photosystem II (PSII) electron transport in the presence of this toxic metal cation. Our results show that below 3 mm , Al³⁺ already caused a destabilization of the Mn₄O₅Ca cluster of the oxygen evolving complex (OEC). At these concentrations, an increase in the relative amplitude of the first phase (OJ) of FI curve and retardation of the fluorescence decay kinetics following excitation with a single turnover flash were also observed. A transmembrane structural modification of PSII polypeptides due to the interaction of Al³⁺ at the OEC is proposed to retard electron transfer between the quinones Q_A and Q_B. Above 3 mm , Al³⁺ strongly retarded fluorescence induction and significantly reduced F_v/F_m together with the maximal amplitude of chlorophyll fluorescence induced by a single turnover flash. This chlorophyll fluorescence quenching was attributed to the formation of P680⁺ due to inhibition of electron transfer between tyrosine 161 of D1 subunit and P680.     

The origin of unidirectional charge separation in photosynthetic reaction centers: nonadiabatic quantum dynamics of exciton and charge in pigment–protein complexes

Exciton charge separation in photosynthetic reaction centers from purple bacteria (PbRC) and photosystem II (PSII) occurs exclusively along one of the two pseudo-symmetric branches (active branch) of pigment–protein complexes. The microscopic origin of unidirectional charge separation in photosynthesis remains controversial. Here we elucidate the essential factors leading to unidirectional charge separation in PbRC and PSII, using nonadiabatic quantum dynamics calculations in conjunction with time-dependent density functional theory (TDDFT) with the quantum mechanics/molecular mechanics/polarizable continuum model (QM/MM/PCM) method. This approach accounts for energetics, electronic coupling, and vibronic coupling of the pigment excited states under electrostatic interactions and polarization of whole protein environments. The calculated time constants of charge separation along the active branches of PbRC and PSII are similar to those observed in time-resolved spectroscopic experiments. In PbRC, Tyr-M210 near the accessary bacteriochlorophyll reduces the energy of the intermediate state and drastically accelerates charge separation overcoming the electron–hole interaction. Remarkably, even though both the active and inactive branches in PSII can accept excitons from light-harvesting complexes, charge separation in the inactive branch is prevented by a weak electronic coupling due to symmetry-breaking of the chlorophyll configurations. The exciton in the inactive branch in PSII can be transferred to the active branch via direct and indirect pathways. Subsequently, the ultrafast electron transfer to pheophytin in the active branch prevents exciton back transfer to the inactive branch, thereby achieving unidirectional charge separation.

Essential factors leading to unidirectional charge separation in photosynthetic reaction centers are clarified via nonadiabatic quantum dynamics calculations.     

Intrinsic Photoprotective Mechanisms in Chlorophylls

Photosynthetic energy conversion competes with the formation of chlorophyll triplet states and the generation of reactive oxygen species. These may, especially under high light stress, damage the photosynthetic apparatus. Many sophisticated photoprotective mechanisms have evolved to secure a harmless flow of excitation energy through the photosynthetic complexes. Time‐resolved laser‐induced optoacoustic spectroscopy was used to compare the properties of the T₁ states of pheophytin a and its metallocomplexes. The lowest quantum yield of the T₁ state is always observed in the Mg complex, which also shows the least efficient energy transfer to O₂. Axial coordination to the central Mg further lowers the yield of both T₁ and singlet oxygen. These results reveal the existence of intrinsic photoprotective mechanisms in chlorophylls, embedded in their molecular design, which substantially suppress the formation of triplet states and the efficiency of energy transfer to O₂, each by 20–25 %. Such intrinsic photoprotective effects must have created a large evolutionary advantage for the Mg complexes during their evolution as the principal photoactive cofactors of photosynthetic proteins.     

Self-aggregates of natural chlorophylls and their synthetic analogues in aqueous media for making light-harvesting systems

Chlorophyll molecules are well organized for efficient energy or electron transfer in a light-harvesting antenna or a reaction center of photosynthetic organisms. In order to make effective photosynthetic mimics, self-aggregates of natural chlorophylls and their synthetic analogues have been prepared with the specific intermolecular interactions. Many studies have been carried out to prepare aqueous chlorophyll aggregates by use of surfactants or chemical modifications of the natural pigments, because chlorophylls basically are poorly soluble in water. This review article focuses on the preparation and function of aqueous chlorophyll aggregates used in making artificial photosynthetic systems.     

Dynamics of Photoinduced Electron‐Transfer Processes in Fullerene‐Based Dyads: Effects of Varying the Donor Strength

Two classes of fullerene‐based donor–bridge–acceptor (D–B–A) systems containing donors of varying oxidation potentials have been synthesized. These systems include fullerenes linked to heteroaromatic donor groups (phenothiazine/phenoxazine) as well as substituted anilines (p‐anisidine/p‐toluidine). In contrast to the model compound, an efficient intramolecular electron transfer is observed from the fullerene singlet excited state in polar solvents. An increase in the rate constant and quantum yield of charge separation (k_cs and Φ_cs) has been observed for both classes of dyads, with decrease in the oxidation potentials of the donor groups. This observation indicates that the rates of the forward electron transfer fall in the normal region of the Marcus curve. The long‐lived charge separation enabled the characterization of electron transfer products, namely, the radical cation of the donor and radical anion of the pyrrolidinofullerene, by using nanosecond transient absorption spectroscopy. The small reorganization energy (λ) of C₆₀ coupled with large negative free energy changes (‐ΔG°) for the back electron transfer places the back electron process in the inverted region of Marcus curve, thereby stabilizing the electron transfer products.     

A T-DNA insertion mutant of AtHMA1 gene encoding a Cu transporting ATPase in Arabidopsis thaliana has a defect in the water–water cycle of photosynthesis

The water–water cycle is the electron flow through scavenging enzymes for the reactive species of oxygen in chloroplasts, and is proposed to play a role in alternative electron sink in photosynthesis. Here we showed that the water–water cycle is impaired in the T-DNA insertion mutant of AtHMA1 gene encoding a Cu transporting ATPase in chloroplasts. Chlorophyll fluorescence under steady state was not affected in hma1, indicating that photosynthetic electron transport under normal condition was not impaired. Under electron acceptor limited conditions, however, hma1 showed distinguished phenotype in chlorophyll fluorescence characteristics. The most severe phenotype of hma1 could be observed in high (0.1%) CO₂ concentrations, indicating that hma1 has the defect other than photorespiration. The transient increase of chlorophyll fluorescence upon the cessation of the actinic light as well as the NPQ induction of chlorophyll fluorescence revealed that the two pathways of cyclic electron flow around PSI, NDH-pathway and FQR-pathway, are both intact in hma1. Based on the NPQ induction under 0% oxygen condition, we conclude that the water–water cycle is impaired in hma1, presumably due to the decreased level of Cu/Zn SOD in the mutant. Under high CO₂ condition, hma1 exhibited slightly higher NPQ induction than wild type plants, while this increase of NPQ in hma1 was suppressed when hma1 was crossed with crr2 having a defect in NDH-mediated PSI cyclic electron flow. We propose that the water–water cycle and NDH-mediated pathways might be regulated compensationally with each other especially when photorespiration is suppressed.     

Electrochemically Gated Long‐Distance Charge Transport in Photosystem I

The transport of electrons along photosynthetic and respiratory chains involves a series of enzymatic reactions that are coupled through redox mediators, including proteins and small molecules. The use of native and synthetic redox probes is key to understanding charge transport mechanisms and to the design of bioelectronic sensors and solar energy conversion devices. However, redox probes have limited tunability to exchange charge at the desired electrochemical potentials (energy levels) and at different protein sites. Herein, we take advantage of electrochemical scanning tunneling microscopy (ECSTM) to control the Fermi level and nanometric position of the ECSTM probe in order to study electron transport in individual photosystem I (PSI) complexes. Current–distance measurements at different potentiostatic conditions indicate that PSI supports long‐distance transport that is electrochemically gated near the redox potential of P700, with current extending farther under hole injection conditions.     

Ionic solvation in water + co-solvent mixtures. Part 8. Total free energies of transfer and free energies of transfer with the “neutral” component removed of single ions from water into water + acetone

The acid dissociation constants of a wide range of acids in water+acetone mixtures have been combined with values for the free energy of transfer of the proton. ΔG⁰_t(H⁺ to calculate values for the free energy of transfer of ions which derive only from the charge on the ion. ΔG⁰_t(i)_c. As the values of ΔG⁰_t(H⁺) have been revised, revised values for the total free energies of transfer of cations and anions, ΔG⁰_t(M⁺) and ΔG^o_t(X^-), are given. New data for ΔG^o_t(MX_n) is also split into values for ΔG⁰_t(Mⁿ⁺) (where n=1 and 2) and ΔG⁰_t(X^?). These free energies of transfer, both total and those deriving from the charge alone, are compared with similar free energies in other mixtures water+co-solvent. Values for ΔG^o_t(i)_c do not conform to a Born-type relationship and show the importance of structural effects in the solvent even when only the transfer of the charge is involved.     

Suppression of Charge Recombination by Auxiliary Atoms in Photoinduced Charge Separation Dynamics with Mn Oxides: A Theoretical Study

Charge separation is one of the most crucial processes in photochemical dynamics of energy conversion, widely observed ranging from water splitting in photosystem II (PSII) of plants to photoinduced oxidation reduction processes. Several basic principles, with respect to charge separation, are known, each of which suffers inherent charge recombination channels that suppress the separation efficiency. We found a charge separation mechanism in the photoinduced excited-state proton transfer dynamics from Mn oxides to organic acceptors. This mechanism is referred to as coupled proton and electron wave-packet transfer (CPEWT), which is essentially a synchronous transfer of electron wave-packets and protons through mutually different spatial channels to separated destinations passing through nonadiabatic regions, such as conical intersections, and avoided crossings. CPEWT also applies to collision-induced ground-state water splitting dynamics catalyzed by Mn₄CaO₅ cluster. For the present photoinduced charge separation dynamics by Mn oxides, we identified a dynamical mechanism of charge recombination. It takes place by passing across nonadiabatic regions, which are different from those for charge separations and lead to the excited states of the initial state before photoabsorption. This article is an overview of our work on photoinduced charge separation and associated charge recombination with an additional study. After reviewing the basic mechanisms of charge separation and recombination, we herein studied substituent effects on the suppression of such charge recombination by doping auxiliary atoms. Our illustrative systems are X–Mn(OH)₂ tied to N-methylformamidine, with X=OH, Be(OH)₃, Mg(OH)₃, Ca(OH)₃, Sr(OH)₃ along with Al(OH)₄ and Zn(OH)₃. We found that the competence of suppression of charge recombination depends significantly on the substituents. The present study should serve as a useful guiding principle in designing the relevant photocatalysts.