Ditopic Aza-Scorpiand Ligands Interact Selectively with ds-RNA and Modulate the Interaction upon Formation of Zn2+ Complexes

Nucleic acids are essential biomolecules in living systems and represent one of the main targets of chemists, biophysics, biologists, and nanotechnologists. New small molecules are continuously developed to target the duplex (ds) structure of DNA and, most recently, RNA to be used as therapeutics and/or biological tools. Stimuli-triggered systems can promote and hamper the interaction to biomolecules through external stimuli such as light and metal coordination. In this work, we report on the interaction with ds-DNA and ds-RNA of two aza-macrocycles able to coordinate Zn²⁺ metal ions and form binuclear complexes. The interaction of the aza-macrocycles and the Zn²⁺ metal complexes with duplex DNA and RNA was studied using UV thermal and fluorescence indicator displacement assays in combination with theoretical studies. Both ligands show a high affinity for ds-DNA/RNA and selectivity for ds-RNA. The ability to interact with these duplexes is blocked upon Zn²⁺ coordination, which was confirmed by the low variation in the melting temperature and poor displacement of the fluorescent dye from the ds-DNA/RNA. Cell viability assays show a decrease in the cytotoxicity of the metal complexes in comparison with the free ligands, which can be associated with the observed binding to the nucleic acids.     

Sodium Phosphaethynolate as a Building Block for Heterocycles

Phosphorus‐containing heterocycles have evolved from laboratory curiosities to functional components, such as ligands in catalytically active metal complexes or molecular constituents in electronic devices. The straightforward synthesis of functionalized heterocycles on a larger scale remains a challenge. Herein, we report the use of the phosphaethynolate (OCP)^? anion as a building block for various sterically unprotected and functionalized hydroxy substituted phosphorus heterocycles. Because the resulting heterocycles are themselves anions, they are building blocks in their own right and allow further facile functionalization. This property may be of interest in coordination chemistry and material science.     

Phosphorescence imaging of living cells with amino acid-functionalized tris(2-phenylpyridine)iridium(III) complexes

A series of nine luminescent cyclometalated octahedral iridium(III) tris(2-phenylpyridine) complexes has been synthesized, functionalized with three different amino acids (glycine, alanine, and lysine), on one, two, or all three of the phenylpyridine ligands. All starting complexes and final compounds have been fully analyzed by one-dimensional (1D) and two-dimensional (2D) NMR spectroscopy, and photophysical data have been obtained for all the mono-, bis-, and tri- substituted iridium(III) complexes. Cellular uptake and localization have been studied with flow cytometry and confocal microscopy, respectively. Confocal experiments demonstrate that all nine substituted iridium(III) complexes show variable uptake in the tumor cells. The monosubstituted iridium(III) complexes give the highest cellular uptake, and the series substituted with lysines shows the highest toxicity. This systematic study of amino acid-functionalized Ir(ppy)(3) complexes provides guidelines for further functionalization and possible implementation of luminescent iridium complexes, for example, in (automated) peptide synthesis or biomarker specific targeting.     

Syntheses of dibenzo[b,e][1,4]dioxin derivatives via iron complexes, and further functionalizations via directed metallation

Double nucleophilic aromatic substitution reactions between (cyclopentadienyl)(η⁶-1,2-dichlorobenzene)iron(1 + ) salts and substituted 1,2benzenediols have been carried out under mild conditions to prepare [η⁶-dibenzo[b,e][1,4]dioxin]iron(1 + ) complexes functionalized in the 1- or 2-position with an alkyl, aldehyde, carboxylic acid, methoxycarbonyl, carboxamide, or hydroxy group. 3-Methyl- and 4-methyl-(η⁶-1,2-dichlorobenzene)iron complexes were treated with substituted 1,2-benzenediols to effect functionalization of both aromatic rings of the heterocycle. The dibenzodioxin ligands were liberated routinely by irradiation with ultraviolet light. Directed deprotonation of the free functionalized dibenzodioxins with an alkyllithium reagent followed by quenching with a variety of electrophiles yielded further derivatives, including two new isoindolone systems.     

Cu(II)-catalyzed olefin migration and Prins cyclization: highly diastereoselective synthesis of substituted tetrahydropyrans

Metal-ligand complexes of Cu(OTf)(2) with an appropriate bisphosphine ligand have been shown to effectively catalyze the formation of substituted tetrahydropyrans via a sequential olefin migration and Prins-type cyclization. This methodology provides convenient access to a variety of functionalized tetrahydropyrans in excellent diastereoselectivities and good to excellent yields.     

Quantum chemical investigation on structures of pyrrolic amides functionalized (5,5) single-walled carbon nanotube and their binding with halide ions

The structures of mono- and di-podal pyrrolic amides functionalized (5,5) single-walled carbon nanotubes (SWCNTs) and their complexes with fluoride, chloride, and bromide ions were obtained using the two-layered ONIOM(MO:MO) and density functional theory (DFT) methods. The binding energies between halide ions and all the receptors and their charge transfers were obtained using DFT method. The computational results indicate that the pyrrolic amide functionalized on the SWCNT affects to the density of state and energy gap of SWCNT. All the free receptors, mono-, di-podal pyrrolic amides and the functionalized SWCNT forming the strongest complexes were found.     

Synthesis of Analogs of Hoechst 33258 Designed for Altered Base and Sequence Recognition

The syntheses of various analogs of the minor groove binding agent Hoechst 33258 I are described to explore their potential of selective helicase blockade and anticancer activity. The target compounds II a,b,c and III a,b,c were obtained by condensation of the appropriate functionalized ortho-diamines and substituted benzimidazole carboxaldehydes in nitrobenzene.     

Synthesis of Functionalized Indoles with a Trifluoromethyl‐Substituted Stereogenic Tertiary Carbon Atom Through an Enantioselective Friedel–Crafts Alkylation with β‐Trifluoromethyl‐α,β‐enones

Chiral complexes of BINOL‐based ligands with zirconium tert‐butoxide catalyze the Friedel–Crafts alkylation reaction of indoles with β‐trifluoromethyl‐α,β‐unsaturated ketones to give functionalized indoles with an asymmetric tertiary carbon center attached to a trifluoromethyl group. The reaction can be applied to a large number of substituted α‐trifluoromethyl enones and substituted indoles. The expected products were obtained with good yields and ees of up to 99 %.     

Synthesis of unsaturated tertiary amines and α-allyl substituted ketones from azomethines using metal complex catalysts

A method has been developed for the regioselective synthesis of unsaturated tertiary amines via the reaction of magnesium amides, derived from Schiff bases, with allylic electrophiles in the presence of Pd and Cu complexes. The reaction of ketimines which have been metallated using magnesium amide with functionalized allylic compounds is catalyzed by Pd complexes and leads to the formation of -allyl substituted ketones with high regioselectivity.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 1, pp. 155–160, January, 1990.     

Relaxivity and Transmetallation Stability of New Benzyl‐Substituted Derivatives of Gadolinium?DTPA Complexes

In our efforts of finding new specific contrast agents of higher relaxivity and selectivity, we have prepared the two new benzyl‐functionalized DTPA (‘diethylenetriamine pentaacetate’) gadolinium complexes (S)‐ 3 and (R,S)‐ 4 , and compared their properties with those of the known regioisomers (S)‐ 2 and (S)‐ 1 . The theoretical fitting of the reduced transverse relaxation rates of the ¹⁷O‐nucleus of H₂O gave values for the water‐residence time (τ_M) of 86–143 ns at 310 K, values that are not limiting the proton relaxivity at body temperature. ¹H‐NMRD (nuclear magnetic‐relaxation dispersion) Profiles showed that the relaxivity of 1 – 4 (r₁=4.3–5.1 s^?1 mM ^?1 at 20 MHz and 310 K) is higher than for the Gd? DTPA parent compound 5 . Transmetallation assessment demonstrated that all substituted compounds, except for (S)‐ 2 , are more stable than 5 . The highest stability towards Zn²⁺‐induced transmetallation was achieved with complexes 3, 1 , and 4 (in decreasing order). Apparently, the steric hindrance of the benzyl substituents in positions 5, 4, and 2, respectively, favorably reduces the accessibility of Zn ions. From a synthetic point of view, 4‐substituted DTPA complexes of type 1 are more readily accessible than 5‐substituted compounds of type 3 . Therefore, the former seem to be superior for linking substituted DTPA complexes to macromolecules or specific vectors.     

The unique properties observed for the unsymmetrical macrocyclic compounds with the highly distorted structure

A new class of aza-macrocycles with the highly distorted structure was found to exhibit unique properties. These macrocycles react with various lithium salts to form lithium complexes and their lithium complexation reactions depend on a substituent on the macrocyclic ring; slower rates and larger equilibrium constants were observed for the macrocycle with a bulkier substituent. The irradiation of these macrocycles by UV light was found to lead to the isomerization, and the photoisomerization rate of macrocycle with the bulky substituent was much faster. The highly distorted structure of these macrocycles makes it much easier to change the conformation of macrocyclic skeleton and these macrocycles have a variety of conformations. The factors to govern this conformational change were therefore explored. The solvent effect was examined by ¹H NMR spectroscopy, because these macrocycles have a strong intramolecular hydrogen bond in the ring. As a result, the solvent was found to have a big effect on the ¹H NMR spectra of macrocycles that could be explained in terms of the conformational change of macrocycle. This finding suggests the solvent to be an important way of controlling the conformation.     

Ab Initio Study of the Adsorption of CO2 on Functionalized Benzenes

The interaction of carbon dioxide with a series of functionalized aromatic molecules was studied by using quantum mechanical methods (MP2), to examine the effect of the substituent on the adsorption of CO₂. Several different initial configurations of CO₂ were taken into account for each functionalized benzene to locate the energetically most favorable configuration. To get a better estimation of the binding energies, we applied an extrapolation scheme to approach the complete basis set. CH₂N₃‐, COOH‐, and SO₃H‐functionalized benzenes were found to have the strongest interaction with CO₂, and the corresponding binding energies were calculated to be ?3.62, ?3.65, and ?4.3 kcal mol^?1, respectively. Electrostatic potential maps of the functionalized benzenes and electron redistribution density plots of the complexes were also created to get a better insight into the nature of the interaction of CO₂ with the functionalized benzenes. The functional groups that were examined can be potentially incorporated in organic bridging molecules that connect the inorganic corners in MOF.     

Substituent effects on exchange coupling: 5-Aryl-substituted semiquinones and their complexes with MnII and CuII

A series of functionalized radical anion semiquinone (SQ-Ar) ligands and their MnII- and CuIIhydro-tris(3-cumenyl-5-methylpyrazolyl)borate (TpCum,MeMII) complexes were prepared and characterized. The semiquinone ligands have substituted phenyl rings (Ar = -C6H5NO2, -C6H5OMe, -C6H5-tert-Bu, etc.) attached to the SQ 5-position. Despite the "remoteness" of the phenyl ring substituents, the MII-SQ exchange parameters, J, were found to vary nearly 3-fold. Attempts to quantify the substituent effects on J are complicated by the fact that not all complexes could be structurally characterized. As such, substituent effects and phenyl-ring torsion angles could conspire to produce the observed variation in J values. Although there is no clear trend in the J values as a function of SQ substituent for the MnII complexes, for the CuII complexes, electron-withdrawing substituents on the phenyl ring have greater ferromagnetic J values than the CuII complexes of SQ ligands with electron-donating substituents. This trend suggests a FM contribution from MLCT excited states in the copper complexes.     

Synthesis of porphyrazine-octaamine, hexamine and diamine derivatives

The syntheses of a variety of substituted diaminomaleonitriles, with variable nitrogen substituents, were undertaken. Linstead macrocyclization of the resulting diaminomaleonitriles gave access to a wide range of functionalized porphyrazine-octaamines and hexamines and norphthalocyaninediamines. Conversion of these macrocycles into metallic derivatives and studies of their electronic absorption, solubility and electrochemistry are described. These flexible tetraazaporphyrins show potential in a range of applications including biomedical agents, novel charge-transfer complexes, chemical sensors, novel electronic materials and non-linear optics.     

Capillary Zone Electrophoresis of Iridium(III) and Ruthenium(II) Polypyridyl Complexes in Non‐aqueous Solvents

Abstract

A method of non‐aqueous capillary zone electrophoresis has been optimized for the characterization of five functionalized mixed‐ligand iridium(III) polypyridyl complexes and four functionalized ruthenium(II) bis‐terpyridine complexes. Their mobilities, the relation to their molar mass, and the capillary lifetime (measured in number of injections) have been determined.     

Bridge functionalized bis-N-heterocyclic carbene rhodium(I) complexes and their application in catalytic hydrosilylation

A series of chelating bridge functionalized bis-N-heterocyclic carbenes (NHC) complexes of rhodium (I) were prepared by reacting the corresponding imidazolium salts with [Rh(COD)Cl]₂ in an in-situ reaction. For the N-methyl substituted complex with a PF₆-anion an X-ray crystal structure was exemplary obtained. All complexes were spectroscopically characterized and tested for the hydrosilylation of acetophenone.     

Sulfonamide carbazole receptors for anion recognition

Carbazole-based receptors functionalized with two sulfonamide groups have been synthesized and their properties as anion receptors have been evaluated. The receptor with bis(trifluoromethyl)aniline groups has shown a very high affinity for halide ions, especially remarkable as only two hydrogen bonds are formed in the complexes. (1)H NMR and fluorescence titrations have been carried out and binding constants up to 7.9 × 10(6) M(-1) have been reached. X-ray structures have been obtained and a modelling study has shown the possible reasons for the large affinity of these compounds for halide anions.     

Noncovalent anchoring of homogeneous catalysts to silica supports with well-defined binding sites

The efficient reversible functionalization of silica with catalytic sites using noncovalent interactions is described. We prepared silica materials with well-defined binding sites that selectively bind guest molecules that are equipped with the complementary binding motif, with the interaction between the two components being based on either hydrogen bonds or metal-ligand interactions. Several phosphine ligands functionalized with glycine-urea groups, required for hydrogen bond formation to the complementary host on the silica, have been prepared. The resulting noncovalently immobilized complexes have been used as a ligand system in the Pd-catalyzed allylic substitution and Rh-catalyzed hydroformylation of 1-octene. The supramolecular interaction between the transition-metal catalyst and the binding site located at the support is sufficiently strong to enable efficient catalyst recycling. In addition, the nature of the support facilitates the de- and refunctionalization of support, allowing the recycling of both homogeneous catalysts and the functionalized support. A rhodium catalyst based on a functionalized xantphos ligand was used in the hydroformylation of 1-octene in 11 consecutive reactions without showing catalyst deterioration or metal leaching.     

Manganese‐Catalyzed Dehydrogenative Alkylation or α‐Olefination of Alkyl‐Substituted N‐Heteroarenes with Alcohols

Catalysis with earth‐abundant transition metals is an option to help save our rare noble‐metal resources and is especially interesting when novel reactivity or selectivity patterns are observed. We report here on a novel reaction, namely the dehydrogenative alkylation or α‐olefination of alkyl‐substituted N‐heteroarenes with alcohols. Manganese complexes developed in our laboratory catalyze the reaction with high efficiency whereas iron and cobalt complexes stabilized by the same ligands are essentially inactive. Hydrogen is liberated during the reaction, and bromine and iodine functional groups as well as olefins are tolerated. A variety of alkyl‐substituted N‐heteroarenes can be functionalized, and benzylic and aliphatic alcohols undergo the reaction.     

Direct Synthesis of Pyrroles by Dehydrogenative Coupling of Diols and Amines Catalyzed by Cobalt Pincer Complexes

Herein, the first example of base‐metal‐catalyzed dehydrogenative coupling of diols and amines to selectively form functionalized 1,2,5‐substituted pyrroles liberating water and hydrogen gas as the sole by‐products is presented. The reaction is catalyzed by pincer complexes of earth‐abundant cobalt.