Computational and spectroscopic characterization of the molecular and electronic structure of the Pb(II)-quercetin complex

The interactions of lead(II) ion with a polyhydroxylated flavonoid, the quercetin molecule, were investigated in methanol solution. The quercetin/metal stoichiometries and equilibrium stability constants for metal binding to quercetin have been determined by UV-vis spectroscopy combined with chemometrics methods. The 2:1, 1:2, and predominant 1:1 species are formed in solution. Among the three potential sites of chelation present in the quercetin structure, the catechol function presents the highest complexation power toward Pb(II), in opposition with previous results found for Al(III) complexation. This result has been confirmed by the good agreement of the experimental and theoretical features for both the electronic and vibrational spectra of the 1:1 complex. DT-DFT calculations show that the bathochromic shift of the long-wavelength band of the UV-vis spectra, that occurs upon complexation, is due to a ligand-to-metal charge transfer. The molecular structure of the ligand is not much modified by the coordination of lead at the level of the catecholate.     

Synthesis, molecular and crystal structure of bis(triethanolamine)manganese(II) saccharinate: a seven-coordinate manganese complex with tri- and tetradentate triethanolamine ligands

The synthesis, molecular and crystal structure of bis(triethanolamine)Mn(II) saccharinate, [Mn(tea)₂](sac)₂ are reported. The configuration of the tea ligands results in an unusual example of coordination number seven for the Mn(II) ion. The two triethanolamine (tea) ligands coordinate to the Mn(II) ion forming a monocapped trigonal prism geometry, in which one of the tea ligands behaves as a tridentate ligand, while the other one acts as a tetradentate donor. The free and coordinated hydroxyl hydrogens of the tea ligands are involved in hydrogen bonding with the amine nitrogen, carbonyl and sulfonyl oxygens of the neighbouring sac ions to form a three-dimensional infinite network. A weak π–π interaction between the phenyl rings of the sac ions also occurs.     

Crystal structure, spectroscopic, magnetic and theoretical studies of [bis(hippurato)bis(benzimidazole)copper(II)] propanol 1/4hydrate

The novel ternary complex [Cu(hipp)₂(bim)₂]·PrOH·0.25H₂O (1) has been prepared and fully characterised by single crystal X-ray structure determination. The central copper(II) is coordinated by two O-donor atoms of the hippurate ions and by two N-atoms of the benzimidazole ligand with a tetrahedrally distorted square-planar geometry. The complex molecules, connected by hydrogen bonds into a 2D network, form a supramolecular structure. A theoretical DFT calculation performed by the UB3LYP method combined with the LanL2DZ basis set shows that all metal-ligand bonds are of the L → M type. The results of the spectroscopic, EPR and NIR–Vis–UV, as well as magnetic study are consistent with the structural data.     

Crystal and molecular structure of bis[tetracarbonyldiphenylphosphidomanganese(0)]

The crystal structure of bis[tetracarbonyldiphenylphosphidomanganese(0)] has been determined by an X-ray diffraction study. The complex crystallizes in the monoclinic space group P2₁/n with four molecules in a unit cell of dimensions, a 15.714(4), b 16.446(5), c 12.016(4) Å, and β 101.25(2)°. The molecule has approximately centrosymmetric bi-octahedral D_2h structure. Each manganese atom is bonded to two phosphorus atoms of μ-diphenylphosphide groups and four carbonyl carbon atoms. The separation of the manganese atoms is 3.690(1) Å.     

Crystal structure,spectroscopic characterization,DFT computations and molecular docking study of a synthesized Zn(II) complex

The Zn(II) complex, dichloro[N-hydroxy-1,1-di(2-pyridinyl)methanimine]zinc(II), was synthesized from the reaction between ZnCl₂ and di-2-pyridylketone oxime. The structural and spectral characterizations were performed by using single crystal X-ray diffraction, FT-IR, Laser-Raman, NMR and UV–Vis spectroscopic techniques. To support experimental evidences, computational results were obtained with the DFT/B3LYP method using the 6-311++G(d,p)+LanL2DZ mixed basis set. Theoretical analyses of some structural and spectroscopic results of effects of intermolecular Cl···H interactions in the crystal packing of the Zn(II) complex were investigated with the mentioned computational level. The non-bonding interactions in the experimental crystal packing of the complex were examined by Hirshfeld surface analysis. The HOMO and LUMO analyses were used for investigation of electronic transitions obtained with UV–Vis spectroscopy. NBO analyses were used to investigate the hyperconjugation interactions between donor and acceptor groups, coordination environment, electronic configuration and electron numbers of the Zn(II) metal ion and the natural atomic charges of the complex. The nucleophilic and electrophilic reactive sites of the complex were studied by MEP surface analysis. The static polarizabilities (α) and static hyperpolarizabilities (β) were analyzed theoretically to characterize NLO profile of the complex. The interaction with A-DNA (PDB ID: 1ZF6) of the Zn(II) complex was investigated with a molecular docking study.     

Electronic structure of bis(imino)pyridine iron dichloride, monochloride, and neutral ligand complexes: a combined structural, spectroscopic, and computational study

The electronic structure of a family of bis(imino)pyridine iron dihalide, monohalide, and neutral ligand compounds has been investigated by spectroscopic and computational methods. The metrical parameters combined with M?ssbauer spectroscopic and magnetic data for ((i)PrPDI)FeCl(2) ((i)PrPDI = 2,6-(2,6-(i)Pr(2)C(6)H(3)N=CMe)(2)C(5)H(3)N) established a high-spin ferrous center ligated by a neutral bis(imino)pyridine ligand. Comparing these data to those for the single electron reduction product, ((i)PrPDI)FeCl, again demonstrated a high-spin ferrous ion, but in this case the S(Fe) = 2 metal center is antiferromagnetically coupled to a ligand-centered radical (S(L) = (1)/(2)), accounting for the experimentally observed S = (3)/(2) ground state. Continued reduction to ((i)PrPDI)FeL(n) (L = N(2), n = 1,2; CO, n = 2; 4-(N,N-dimethylamino)pyridine, n = 1) resulted in a doubly reduced bis(imino)pyridine diradical, preserving the ferrous ion. Both the computational and the experimental data for the N,N-(dimethylamino)pyridine compound demonstrate nearly isoenergetic singlet (S(L) = 0) and triplet (S(L) = 1) forms of the bis(imino)pyridine dianion. In both spin states, the iron is intermediate spin (S(Fe) = 1) ferrous. Experimentally, the compound has a spin singlet ground state (S = 0) due to antiferromagnetic coupling of iron and the ligand triplet state. Mixing of the singlet diradical excited state with the triplet ground state of the ligand via spin-orbit coupling results in temperature-independent paramagnetism and accounts for the large dispersion in (1)H NMR chemical shifts observed for the in-plane protons on the chelate. Overall, these studies establish that reduction of ((i)PrPDI)FeCl(2) with alkali metal or borohydride reagents results in sequential electron transfers to the conjugated pi-system of the ligand rather than to the metal center.     

Electrochemical synthesis and structural characterization of a novel mixed-valence copper(I)-copper(II) complex: {[bis(ethylenediamine)copper(II)] bis[diiodocuprate(I)]}

A novel, mixed-valent copper(I)-copper(II) complex, {[bis(ethylene-diamine)copper(II)] bis[diiodocuprate(I)]} (1), has been prepared by electrochemical dissolution of a sacrificial copper anode in a solution of ethylenediamine (en), I2 and tetraethylammoniumperchlorate (TEAP) as supporting electrolyte in acetonitrile (AcN)and characterized by single-crystal X-ray structure determination. The crystal structure of the complex 1 shows that it consists of a CuI2 polymer formed from I- ligands bridging Cu(I) ions, with a nearly square planar geometry of bivalent Cu(II) atoms chelated by two ethylenediamine ligands. The results also show that direct electrosynthesis of the complex had high current efficiency, purity and electrolysis yield.     

Oxidation of an o-iminobenzosemiquinone radical ligand by molecular bromine: structural, spectroscopic, and reactivity studies of a copper(II) o-iminobenzoquinone complex

The bis(o-iminobenzosemiquinonato)copper(II) complex 1, containing the radical form [L(*)SQ](1-) arising from the aerial oxidation of the noninnocent ligand 2-anilino-4,6-di- tert-butylphenol, H2L, is readily oxidized by molecular bromine to a bis(o-iminobenzoquinone)copper(II) complex, 2. Thus, a ligand-based oxidative addition is reported for complex 1 containing an electron-rich Cu(II) d(9) metal ion. The crystal structure of the synthesized hexacoordinated complex [Cu(II)(LBQ)2Br2] (2) has been determined by X-ray crystallography at 100 K. Variable-temperature (2-290 K) magnetic susceptibility measurements and an X-band electron paramagnetic resonance spectrum establish the spin state to be St = 1/2 because of localized spin moments mainly in the (d(x(2)-y(2)))(1) orbital of a Cu(II) d(9) ion, indicating clearly the presence of a neutral iminobenzoquinone form, [LBQ](0), of the ligand in 2, as is found also in the X-ray structure. Electrochemical measurements (cyclic voltammograms and coulometry) indicate two successive one-electron reductions of the ligand. The reactivity of complex 2 as an oxidizing agent toward ethanol and triethylamine has been investigated.     

The manganese(III) complex with chelating Schiff base ligand: X-ray structure,spectroscopic and computational studies

A new Mn(III) complex, [MnCl(H₂O)(L)]·H₂O·C₂H₅OH, where L = 2,2′-{1,2-phenylenebis[nitrilomethylylidene]}bis(6-methoxyphenolate), has been synthesized and characterized by single-crystal X-ray diffraction. There is a good agreement between calculated and experimental structural data. The complex is crystallized in orthorhombic with space group Pbca. The Mn1 atom is coordinated with one Schiff base ligand, one water molecule and one chloride anion, forming a six-coordination number. The electronic and fluorescence spectra of the complex were also studied.     

Synthesis,spectroscopic properties and crystal structure of the eight-coordinated lead complex bis[thiocyanato]-1,4,7,10,13-pentaoxacyclopentadecano lead(II)

The complex [Pbc[15]crown-5](SCN)₂ was synthesized and characterized spectroscopically (IR and FIR range) and the crystal structure was determined by X-ray diffraction on a single crystal (orthorhombic space group Pmc2₁). The structure was solved by Patterson synthesis with least-square refinement. The final R-value is 0.0328. Two Pb-atoms and two unidentical halves of the ligand were found in the asymmetric unit. For each complexed lead cation and each half of the crown ether there exists a plane of reflexion, whereby C18 and C28 are disordered. There is, however, no centre of inversion between these unidentical halves. The elementary cell comprises four units and two different types of two centrally coordinated Pb cations. Both lead cations are eight-coordinated. In the case of Pb1 the eight donor centres are the five O-atoms of the ligand and three N-atoms of the thiocyanates. For Pb2 these are five oxygens of the ligand, one nitrogen and two sulphurs of the three thiocyanates. In this complex the thiocyanate ligands occur in both ionic and covalent states. The complexation of the crown ether and the two different species of thiocyanate anions are indicated too by typical shifted absorption bands in the IR spectra. The vibrations in the FIR region can be assigned to the interactions between lead and the donor groups.     

Synthesis,crystal, molecular,and electronic structure of [ReOCl3(bpzm)] complex

The [ReOCl₃(OAsPh₃)(AsPh₃)] and [ReOCl₃(PPh₃)₂] complexes react with bis(pyrazol-1-yl)methane (bpzm) to give [ReOCl₃(bpzm)]. The compound has been studied by IR, UV–Vis spectroscopy, and X-ray crystallography. The molecular orbital diagram of the oxocomplex has been calculated with the density functional theory (DFT) method. The spin-allowed singlet–singlet electronic transitions of [ReOCl₃(bpzm)] have been calculated with the time-dependent DFT method, and the UV–Vis spectrum of the title compound has been discussed on this basis.     

Synthesis,crystal structure and electronic properties of bis(N-2-bromophenyl-salicydenaminato)copper(II) complex

A new series of complexes of the type bis(N-substituted-salicydenaminato)copper(II) (1–9), have been synthesized and characterized by IR, UV–Vis and elemental analysis methods. The molecular structure of bis(N-2-bromophenyl-salicydenaminato)copper(II) (6), was determined using X-ray crystallography. There are two independent molecules in the structure. Each shows a neutral, mononuclear, four-coordinate, square-planar trans-Cu[N₂O₂] geometry and, in each, the Cu atom and the ligating atoms are coplanar. The chelating N–Cu–O angle is 91.39(11)° for molecule one and 91.20(11)° for molecule two, whereas the non-chelating N–Cu–O angles are 88.61(11) and 88.80(11)°, respectively. The trans-N–Cu–N and trans-O–Cu–O bond angles are 180°. The electronic absorption spectra of copper(II) complexes (1–9), indicate that the d–d band energy is dependent on the nature and position of substituent on phenyl ring of the salicyldenimine ligand. The UV–Vis spectra in various solvents were measured and a relationship between absorption spectra and dielectric constant of the solvents is reported.     

Synthesis,structure determination,and magnetic properties of pentakis[ bis (hexafluoroacetylacetonato)1,2,4-triazinecopper(II)]

Reaction of bis(hexafluoroacetylacetonato)copper(II) hydrate with 1,2,4-triazine (tz) in dichloromethane yields pentakis[bis(hexafluoroacetylacetonato)triazinecopper(II)] [Cu(hfac)₂(tz)]₅ (hfac = hexafluoroacetylacetonate) (1). The complex crystallizes in the triclinic space group P-1, with cell parameters a = 11.4124(5), b = 13.3405(5), c = 16.1794(7) Å, α = 93.360(2)°, β = 108.700(2)°, γ = 100.293(2)° at 120(1) K. In the complex, the copper(II) ions show three types of coordination polyhedra: square planar, square pyramidal, and octahedral (4 + 2). The tz ligand also shows different coordination modes (bridging and monodentate). In addition, disorder is observed in the triazine molecule, either through non-crystallographic two-fold rotation about the longitudinal N,N-axis, or with respect to a crystallographic center of symmetry. The crystal structure of 1 consists of alternating trimers and dimers. The weak coordination of the tz molecules results in negligible magnetic exchange through the ring.     

双[N-(R)-α-甲苄基水杨醛亚氨基]铜(II)配合物的晶体结构和分子结构

报道标题Schiff碱铜(II)配合物的制备和晶体结构的测定.该晶体属正交晶系,空间群为p2~12~12~1,晶胞参数为α=0.8844(2),b=1.6286(4),c=1.7751(5)nm,V=2.5568(2)nm[3],Z=4,Dx=1.33g.cm[-3],F(000)=1068e,μ=9.2cm[-1](MoKα).用Patterson法和Fourier合成法解出结构,经最小二乘法修正,最终偏离因子R值为5.8%.结构分析结果表明,分子中Cu(II)呈畸变的四面体配位.两个配位平面CuN(1)O(1)禁CuN(2)O(2)之间夹角为39.3度.两个水杨醛亚氨基N上的α-甲苄基彼此相互垂直并在CuN(1)O(1)N(2)O(2)的近似平面的同一侧.它们又与各自的水杨醛亚氨基平面几乎垂直.