Structure of tecophilin,a tri-caffeoylanthocyanin from the blue petals of Tecophilaea cyanocrocus, and the mechanism of blue color development

The pigment, tecophilin, in blue flowers of Tecophilaea cyanocrocus was isolated and the structure was determined to be 3-O-(6-O-α-l-rhamnopyranosyl-β-d-glucopyranosyl)-7-O-(6-O-(4-O-(2-O-(4-O-β-d-glucopyranosyl-(E)-caffeoyl)-6-O-(4-O-β-d-glucopyranosyl-(E)-caffeoyl)-β-d-glucopyranosyl)-(E)-caffeoyl)-β-d-glucopyranosyl)delphinidin. The reproduction experiment of the same color as petals according to the results of chemical analysis and measurement of vacuolar pH of blue cells clarified that the blue color solely develops by tecophilin without interaction of metal ions nor co-pigments. ¹H NMR analysis and CD spectrum indicate the co-existence of clockwise intermolecular self-association of the delphinidin nuclei and intramolecular π–π stacking between the chromophore and caffeoyl residues to derive bathochromic shift of the absorption spectrum and stabilize the color by preventing hydration reaction.     

Analysis and purification of O-decanoyl sucrose regio-isomers by reversed phase high pressure liquid chromatography with evaporative light scattering detection

Purification of seven regio-isomers of O-decanoyl sucrose, 2-O-, 3-O-, 4-O-, 6-O-, 3′-O-, 4′-O- and 6′-O-decanoyl sucrose, were performed by LC followed by preparative RP-HPLC with ELSD. Using an optimized gradient of acetonitrile in water 2-O-, 3-O-, 6-O- and 3′-O-decanoyl sucrose were purified in yields (w/w) of 52.5%, 34.7%, 45.0% and 36.9%, respectively. In the purified preparations of the 2-O- and 3′-O-decanoyl sucrose respectively, acyl migration was observed as a result of the drying process. Lyophilization resulted in the highest purities (w/w) of 96% and 100% for the 2-O- and the 3′-O-decanoyl sucrose, respectively.     

Synthesis of the first per(3-deoxy)-cyclooligosaccharide: hepta(manno-3-deoxy-6-O-t-butyldimethylsilyl)-β-cyclodextrin

Reduction of hepta(manno-2,3-anhydro-6-O-t-butyldimethylsilyl)-β-cyclodextrin with lithium triethylborohydride gives hepta(manno-3-deoxy-6-O-t-butyldimethylsilyl)-β-cyclodextrin. This compound plus the hepta(2-O-methyl)- and hepta(2-O-benzyl)-derivatives all have the ⁴C₁ conformation. Capillary GC columns manufactured with hepta(manno-2,3-anhydro-, hepta(manno-3-deoxy-2-O-methyl- and hepta(manno-2-O-benzyl-6-O-t-butyldimethylsilyl)-β-cyclodextrin stationary phases were evaluated for enantio-discrimination with 39 non-polar racemic analytes. The GC column coated with the benzyl derivative showed enantioselectivity comparable to, and in some cases superior to, a commercial per(methyl)-β-cyclodextrin column. The other columns showed little or no enantio-discrimination. A thermodynamics study established a linear enthalpy–entropy compensation effect for two series of analytes on the commercial permethyl-β-cyclodextrin column, but not for the column coated with the benzyl derivative.     

Synthese des substances de groupe sanguin—IX: Une synthese du 2-o-(α-l-fucopyranosyl)-3-o-(α-d-galactopyranosyl)-d-galactose,le determinant antigenique du groupe sanguin b

The trisaccharide 2-O-(α-L-fucopyranosyl)-3-O-(α-D-galactopyranosyl)-D-galactose has been synthesised stereospecifically using the imidate procedure. Allyl 3-O-benzoyl-4,6-O-benzylidene-β-D-galactopyranoside was first α-L-fucosylated by 1-O-(N-methyl)-acetimidyl-2,3,4-tri-O-benzyl-β-L-fucopyranose then, after O-debenzoylation, α-D-galactosylated by 1-O-(N-methyl)-acetimidyl 2,3,4,6-tetra-O-benzyl-β-D-galactopyranose. The resulting tri-saccharide has also been obtained from allyl 2-O-benzoyl-4,6-O-benzylidene-β-D-galactopyranoside after α-D-galactosylation, O-debenzoylation and α-L-fucosylation. The glycosylations were performed at room temperature in nitromethane in the presence of p-toluenesulfonic acid. Deallylation followed by catalytic hydrogenolysis gave the B blood-group antigenic determinant. The allyl group was also selectively transformed into hydroxyethyl group.     

Quantitative Analysis of Caffeoylquinic Acids and Styrylpyrones in Sweetia panamensis Bark by UPLC

Six secondary metabolites from the methanolic extract of Sweetia panamensis (Fabaceae) bark were isolated and characterised. Along with the pyrones desmethylangonine β-d-O-glucopyranoside and desmethylangonine β-d-O-glucopyranosyl-(1→6)-O-β-d-glucopyranoside, already reported in this species, 5-O-caffeoylquinic acid (chlorogenic acid), 4-O-caffeoylquinic acid, 3-O-caffeoylquinic acid and the isoflavonoid 5-O-methylgenistein 7-O-β-d-glucopyranoside were isolated for the first time from S. panamensis. Additionally, an LC-ESI-MS qualitative analysis was performed and an ultra performance liquid chromatography (UPLC) method was developed and validated for the determination of these compounds. The UPLC method was applied to the quantitative analysis of plant samples. Pyrones and caffeoylquinic acids resulted to be the main compounds in the extract; in particular desmethylangonine β-d-O-glucopyranosyl-(1→6)-O-β-d-glucopyranoside was the most abundant compound.     

Two novel carbonic acid esters conjugated with oligophenyl glucosides from Rhamnus nakaharai

Two novel carbonic acid esters conjugated with oligomeric phenyl glycosides have been isolated and characterized from the wood of Rhamnus nakaharai. The structures are characterized as 5,7-dihydroxyphthalide 5-O-β-[6-O-{3″-methoxy-4″-O-β-[6?-O-(4?-O-carboxy-3?,5?-dimethoxy)phenyl]glucopyranosyl}phenyl]glucopyranoside (1) and 6-O-{3′-methoxy-4′-O-β-[6″-O-(3?-mercapto-5?-methoxy-4?-O-methylcarboxy)phenyl]glucopyranosyl}phenyl β-glucopyranose (2), namely, rhamnakoside A (1) and B (2), all by NMR and other spectral methods, respectively. They could be a novel case of phase II detoxification products and biogenetic diversity in plant kingdom.     

First synthesis of 5,6-branched galacto-hexasaccharide,the dimer of the trisaccharide repeating unit of the cell-wall galactans of Bifidobacterium catenulatum YIT 4016

α-d-Galactopyranosyl-(1→6)-[β-d-galactofuranosyl-(1→5)]-β-d-galactofuranosyl-(1→6)-β-d-galactofuranosyl-(1→5)-[α-d-galactopyranosyl-(1→6)]-β-d-galactofuranose, the dimer of the trisaccharide repeating unit of the cell-wall galactans of Bifidobacterium catenulatum YIT 4016, has been synthesized as its dodecyl glycoside 2 by coupling of 2,3,4,6-tetra-O-benzyl-α-d-galactopyranosyl-(1→6)-[6-O-acetyl-2,3,5-tri-O-benzoyl-β-d-galactofuranosyl-(1→5)]-2-O-acetyl-3-O-benzyl-β-d-galactofuranosyl trichloroacetimidate 14 with dodecyl 2,3,4,6-tetra-O-benzyl-α-d-galactopyranosyl-(1→6)-[2,3,5-tri-O-benzoyl-β-d-galactofuranosyl-(1→5)]-2-O-acetyl-3-O-benzyl-β-d-galactofuranoside 16. The trisaccharide trichloroacetimidate donor 14 and trisaccharide acceptor 16 were regiospecifically prepared by employing 3-O-benzyl-1,2-O-isopropylidene-α-d-galactofuranose 4 as the glycosyl acceptor, and isopropyl 2,3,4,6-tetra-O-benzyl-1-thio-β-d-galactopyranoside 5 and 6-O-acetyl-2,3,5-tri-O-benzoyl-β-d-galactofuranosyl trichloroacetimidate 9 as glycosyl donors.     

Synthesis of mono-, di- and trisulfated Lewis x trisaccharides

3′-Sulfated and 3′,6′-disulfated Lewis x trisaccharides have been prepared through selective sulfation of methyl 2-acetamido-6-O-benzyl-2-deoxy-4-O-β-D-galactopyranosyl-3-O-(2,3,4-tri-O-benzyl-α-L-fucopyranosyl)-β-D-glucopyranoside, followed by catalytic hydrogenolysis. In a similar manner, 3′,6-disulfated and 3′,6,6′-trisulfated Lewis x trisaccharides have been selectively obtained from methyl 2-acetamido-2-deoxy-4-O-β-D-galactopyranosyl-3-O-(2,3,4-tri-O-benzyl-α-L-fucopyranosyl)-β-D-glucopyranoside.     

A nitro sugar mediated synthesis of 6-amino-1,5,6-trideoxy-1,5-imino-d-glucitol (6-amino-1,6-dideoxynojirimycin)

6-Benzoylamino-3-O-benzyl-1,5,6-trideoxy-N-(1,1-diphenylmethyl)-1,5-imino-d-glucitol 12a and its epimer 6-benzoylamino-3-O-benzyl-1,5,6-trideoxy-N-(1,1-diphenylmethyl)-1,5-imino-l-iditol 12b, the protected forms of 6-amino-1,6-dideoxynojirimycin 4 and its C-5 epimer 5, respectively, were easily prepared from diacetone-d-glucose via 6-O-benzoyl-3-O-benzyl-1,2-O-isopropylidene-5-C-nitromethyl-α-d-glucofuranose 7a or 6-O-benzoyl-3-O-benzyl-1,2-O-isopropylidene-5-C-nitromethyl-β-l-idofuranose 7b. 6-Amino-1,6-dideoxynojirimycin 4 (an important precursor of a wide range of glycosidase inhibitors) was easily prepared from 1,5-imino-d-glucitol 12a.     

Synthese des substances de groupe sanguin—IV : Synthese du 2-acetamido-2-desoxy-4-O-[2-O-(α-l-fucopyranosyl)-β-d-galactopyranosyl]-d-glucopyranose,porteur de la specificite H

The synthesis of a H blood group specific trisaccharide was performed by using benzyl ethers as temporary blocking groups for hydroxylic functions. Benzyl 2-acetamido-3,6-di-O-benzyl-2-deoxy-α-d- glucopyranoside was glycosylated by 3,4,6-tri-O-benzyl-1,2-O-benzyl-1,2-O-(tert-butoxyethylidene)-α-d-galactopyranose; after O-deacetylation, glycosylation by 2,3,4-tri-O-benzyl-α-l-fucopyranosyl bromide, and hydrogenolysis, 2-acetamido-2-deoxy-4-O-[2-O-(α-l-fucopyranosyl)-β-d-galactopyranosyl]-d-glucopyranose is obtained.     

Total synthesis of macrocyclic glycosides, clemochinenosides A and B, and berchemolide, by fluorous mixture synthesis

The total synthesis of clemochinenoside A and the first total syntheses of clemochinenoside B and berchemolide were achieved simultaneously via macrocyclization of 4-O-(4-O-^F13benzyl-β-d-glucopyranosyl)syringic acid with 4-O-(4-O-^F17benzyl-β-d-glucopyranosyl)vanillic acid by a fluorous mixture synthetic method. The spectroscopic data of the synthetic products were identical with those of the natural products, although the optical rotation of clemochinenoside A differed from the published values in sign and magnitude.     

Synthesis of novel 5-O-(6′-O-modified)-desosamine 14-membered ketolides

A new and facile procedure was developed to synthesize novel 5-0- (6′-O-modified)-desosamine 14-membered ketolides by adopting different protective strategies and comparing various glycosylation conditions. Two trichloroacetimidate donors, with Lev or Ac substituent groups at the C-6 position, were synthesized to couple with the erythronolide. Several novel 5-0- (6′-O-modified)-desosamine 14-membered ketolides were obtained to verify the utility of the method.     

Determination of the configurations of tertiary alcoholic centers in branched-chain carbohydrate derivatives : PMR spectroscopy with a lanthanide shift-reagent

Examination of the PMR spectral changes (expressed as shift gradients of individual protons) wrought by graduated addition of the paramagnetic lanthanide complex tris [1,1,1,2,2,3,3-heptafluoro- 7,7-dimethyloctane-4,6-dionato]europium(III) [Eu(fod)₃] permitted assignment of the configuration at tertiary alcoholic centers of certain sugar derivatives. The configurations of the tertiary position of 3- C-(1,3-dithian-2-yl)-1,2:5,6-di-O-isopropylidene-α-d-allofuranose (1), lethyl of 4,6-O-benzylidene-2- deoxy-3-C-(dithian-2-yl)-α-d-ribo-hexopyranoside (2) and the corresponding 3-C-butyl compound (2a), and methyl 2-C-(1,3-dithian-2-yl)-3,4-O-isopropylidene-δ-d-ribopyranoside (3) were assigned by comparison with reference spectra. The proton shift-gradients for 5-C-benzoyloxymethyl-2,3-O- cyclohexylidene-1-O-p-tolylsulfonyl-1(R),2(S),3(S),5(R)-cyclohexanetetrol (4), taken in conjunction with the spin-spin coupling values, permit direct assignment of relative stereochemistry in the latter compound.     

Synthesis of novel chiral phosphines from α,α-trehalose

New disaccharide chiral phosphines, such as 4,6-O-benzylidene-2-(diphenylphosphino)-2-deoxy-α-d-altropyranosyl-(1,1)-4,6-O-benzylidene-2-(diphenylphosphino)-2-deoxy-α-d-altropyranoside 1 and 2-(diphenylphosphino)-2-deoxy-4,6-O-isopropylidene-α-d-altropyranosyl-(1,1)-2-(diphenylphosphino)-2-deoxy-4,6-O-isopropylidene-α-d-altropyranoside 9, were prepared from α,α-trehalose. We also succeeded in the synthesis of polyhydroxy chiral diphosphine 2-(diphenylphosphino)-2-deoxy-α-d-altropyranosyl-(1,1)-2-(diphenylphosphino)-2-deoxy-α-d-altropyranoside 5 by deprotection of isopropylidene groups.     

Stereoselective synthesis of 1-O-β-feruloyl and 1-O-β-sinapoyl glucopyranoses

1-O-β-Feruloyl and 1-O-β-sinapoyl glucopyranoses are two common substrates for serine carboxypeptidase-like acyltransferases and serve as acyl donors in the biosynthesis of numerous secondary metabolites. In addition, they are involved in plant cell wall cross-linking and are also ideal substrates for studying the kinetics of lignification involving hydroxycinnamates. We report the first chemical (and multi-gram scale) synthesis of 1-O-β-feruloyl and 1-O-β-sinapoyl glucopyranoses.     

Design of 2′-phenylethynylpyrene excimer forming DNA/RNA probes for homogeneous SNP detection: The attachment manner matters

1-Phenylethynylpyrene fluorophore (1-PEPy) has long-wavelength shifted emission and higher photostability compared to pyrene, retaining, however, pyrene's ability to form excimers. Here we report the synthesis of 2′-O-[3(and 4)-(pyren-1-ylethynyl)benzyl]-uridines and their tandem incorporation into deoxyribo- and 2′-O-Me-ribo-oligonucleotide probes. Excimer forming probes of type NN … NNXXNN … NN (X = 2′-O-[meta(or para)-(pyren-1-ylethynyl)-benzyl]uridine) containing two adjacent fluorescent nucleosides within an oligonucleotide are available in four types (meta-meta; para-meta; meta-para; para-para). Both DNA (N = deoxyribonucleotides) and 2′-O-Me-RNA (N = 2′-O-Me-ribo-nucleotides) probes were synthesized and their hybridization with complementary and singly mismatched DNA and RNA was studied. Several probes show a dramatic response of their excimer-to-monomer intensity ratio upon hybridization. Remarkably, most spectacular fluorescence changes were demonstrated for probes with para-meta and meta-para combination within 2′-O-Me-ribo-oligonucleotides. Using excimer forming probes, three natural SNP in Helicobacter pylori 23S RNA gene (A2144G, A2143G, A2143C) and the wild type gene can be distinguished.     

Characterisation and properties of new ionic liquids with the difluoromono[1,2-oxalato(2-)-O,O′]borate anion

Three ionic liquids with borate anions of low symmetry, tetraethylammonium difluoromono[1,2-oxalato(2-)-O,O′]borate, 1-ethyl-3-methylimidazolium difluoromono[1,2-oxalato(2-)-O,O′]borate, and 1-butyl-3-methylimidazolium difluoromono[1,2-oxalato(2-)-O,O′]borate were synthesised and characterised by physicochemical and electrochemical measurements including thermogravimetric analysis (TGA), differential scanning calorimetry (DSC), cyclic voltammetry (CV), viscosity and conductivity measurements.     

Isolation,Characterization and In Silico Studies of Secondary Metabolites from the Whole Plant of Polygala inexpectata Peşmen & Erik

Polygala species are frequently used worldwide in the treatment of various diseases, such as inflammatory and autoimmune disorders as well as metabolic and neurodegenerative diseases, due to the large number of secondary metabolites they contain. The present study was performed on Polygala inexpectata, which is a narrow endemic species for the flora of Turkey, and resulted in the isolation of nine known compounds, 6,3′-disinapoyl-sucrose (1), 6-O-sinapoyl,3′-O-trimethoxy-cinnamoyl-sucrose (tenuifoliside C) (2), 3′-O-(O-methyl-feruloyl)-sucrose (3), 3′-O-(sinapoyl)-sucrose (4), 3′-O-trimethoxy-cinnamoyl-sucrose (glomeratose) (5), 3′-O-feruloyl-sucrose (sibiricose A5) (6), sinapyl alcohol 4-O-glucoside (syringin or eleutheroside B) (7), liriodendrin (8), and 7,4′-di-O-methylquercetin-3-O-β-rutinoside (ombuin 3-O-rutinoside or ombuoside) (9). The structures of the compounds were determined by the spectroscopic methods including 1D-NMR (¹H NMR, ¹³C NMR, DEPT-135), 2D-NMR (COSY, NOESY, HSQC, HMBC), and HRMS. The isolated compounds were shown in an in silico setting to be accommodated well within the inhibitor-binding pockets of myeloperoxidase and inducible nitric oxide synthase and anchored mainly through hydrogen-bonding interactions and π-effects. It is therefore plausible to suggest that the previously established anti-inflammatory properties of some Polygala-derived phytochemicals may be due, in part, to the modulation of pro-inflammatory enzyme activities.     

Enantiomerically pure phosphonate analogues of cis- and trans-4-hydroxyprolines

All the enantiomers of O,O-diethyl 4-hydroxypyrrolidinyl-2-phosphonates, phosphonate analogues of cis- and trans-4-hydroxyprolines, have been obtained for the first time. The synthetic strategy involved 1,3-dipolar cycloaddition of (R)- and (S)-N-(1-phenylethyl)-C-(diethoxyphosphoryl)nitrones to allyl alcohol and separation of the corresponding O,O-diethyl 5-(hydroxymethyl)-2-(1-phenylethyl)isoxazolidinyl-3-phosphonates, which were subsequently mesylated and hydrogenated to undergo intramolecular cyclisation. Absolute configurations of the enantiomeric proline phosphonates were established after N- and O-derivatization with (S)-O-methylmandelic acid employing the Trost model.     

Triterpenoid Saponins from the Cultivar “Green Elf” of Pittosporum tenuifolium

Four oleanane-type glycosides were isolated from a horticultural cultivar “Green Elf” of the endemic Pittosporum tenuifolium (Pittosporaceae) from New Zealand: three acylated barringtogenol C glycosides from the leaves, with two previously undescribed 3-O-β-d-glucopyranosyl-(1→2)-[α-l-arabinopyranosyl-(1→3)]-β-d-glucuronopyranosyl-21-O-angeloyl-28-O-acetylbarringtogenol C, 3-O-β-d-galactopyranosyl-(1→2)-[α-l-arabinopyranosyl-(1→3)]-β-d-glucuronopyranosyl-21-O-angeloyl-28-O-acetylbarringtogenol C, and the known 3-O-β-d-glucopyranosyl-(1→2)-[α-l-arabinopyranosyl-(1→3)]-β-d-glucuronopyranosyl-21-O-angeloyl-28-O-acetylbarringtogenol C (Eryngioside L). From the roots, the known 3-O-β-d-glucopyranosyl-(1→2)-β-d-galactopyranosyl-(1→2)-β-d-glucuronopyranosyloleanolic acid (Sandrosaponin X) was identified. Their structures were elucidated by spectroscopic methods including 1D- and 2D-NMR experiments and mass spectrometry (ESI-MS). According to their structural similarities with gymnemic acids, the inhibitory activities on the sweet taste TAS1R2/TAS1R3 receptor of an aqueous ethanolic extract of the leaves and roots, a crude saponin mixture, 3-O-β-d-glucopyranosyl-(1→2)-[α-l-arabinopyranosyl-(1→3)]-β-d-glucuronopyranosyl-21-O-angeloyl-28-O-acetylbarringtogenol C, and Eryngioside L were evaluated.