Toxicity （-lgEC50） Measurement of the Fluorobenzene Derivants against Vibrio Qinghaiensis （Q67） and Their 2D,3D-QSAR Study

Toxicities (-lgEC50) of 16 fluorobenzene derivants against vibrio qinghaiensis (Q67) were measured systematically,and their quantum chemistry parameters were calculated at the B3LYP/6-311G** level. Based on the experimental toxicity data and quantum chemistry parameters,2D-QSAR model was proposed,which was validated by variance inflation factors (VIF),t-value and cross-validation method. At the mean time,comparative molecular force field (CoMFA) based on molecular simulation was used to investigate the toxicity of fluorobenzene derivants. Furthermore,the intoxicating mechanism of fluorobenzene derivants was discussed. To our interest,2D-QSAR and CoMFA models exhibit good prediction ability,with which the toxicity of similar compounds can be predicted. Finally,toxicities (-lgEC50) of 12 fluorobenzene derivants against vibrio qinghaiensis (Q67) were predicted with these models.     

Study on the Three-dimensional Quantitative Structure-activity Relationship of Pyridazinonyl-substituted 1,3,4-Thiadiazoles

The three-dimensional quantitative structure-activity relationships of a series of 5-[ 1-aryl-1,4-dihydro-6-methylpyridazin-4-one-3-yl]-2-arylamino-1,3,4-thiadiazoles, related to the fungicidal activity, were studied using the comparative molecular field analysis （CoMFA）. The results show that the contributions of steric and electrostatic fields to the activity are 0.505 and 0.495, respectively. The cross-validated q^2 and the correlation coefficient r^2 for the model established by the study are 0.769 and 0.938, respectively, with the F value of 60.996, and the standard deviation s of 0.074. These values indicate that the model is significant and has good predictability. The analysis results are in good agreement well with the study of 2D-QSAR, and offered important structural insights into designing highly active compounds prior to synthesis.     

Quantum Study on the Hydrogen Bonding Interaction of Luteolin-（CH_3OH）_n

The optimized geometries and vibration frequencies of luteolin,methanol and luteolin-(CH3OH)n complexes have been investigated by density functional theory using B3LYP method.Four stable luteolin-CH3OH complexes,six stable luteolin-(CH3OH)2 complexes and four stable luteolin-(CH3OH)3 complexes have been obtained.The theories of atoms in molecules(AIM) and natural bond orbital(NBO) have been used to analyze the hydrogen bonds of these compounds,and their interaction energies corrected by basis set superposition error are between-8.046 and-76.124 kJ/mol.The calculation results indicate strong hydrogen bonding interactions in the luteolin-(CH3OH)n complexes.Then the nuclear magnetic resonance(NMR) and electronic absorption spectrum of luteolin have been calculated,and the results are in agreement with the experimental data.     

Quantum-chemical Study on the Structures and Properties of Uracil-BX3 （X = F, Cl） Complexes

1 INTRODUCTION The intermolecular interaction of bases in DNA or RNA is of immense interest and significance to che- mists and biologists alike. The interactions of these bases with metal cations, solvent molecules and other small molecules or ions would affect the struc- ture and biological properties or recognition process,which has been investigated widely[1～8]. Boron contained compounds are electron deficient com- pounds and have been extensively used as catalysts in chemical react…     

Theoretical Studies on the Stabilities and Hydrogen Bond Actions of （H2O）n Clusters

1 INTRODUCTION In the latest ten years, the structure and function of water clusters have captured the interest of chemists. One of the most important study objects in water cluster is to describe the behavior of water so- lution quantitatively at molecule level, which will pave the way for the solving of some environmental and other scientific problems, such as the formation of acid rain and nucleation mechanism of little water drop. Besides, weak interaction in water clusters could be al…     

DFT Study on the （S）-Proline-catalyzed Direct Aldol Reaction between Acetone and 4-Nitrobenzaldehyde

1 INTRODUCTION Aldol reaction, one of the most important C–C bond-formation reactions, is widely utilized in orga- nic synthesis[1]. Extensive efforts have been donated to the development of catalytic stereo-selective va- riants of this reaction[2]. However, the direct aldol reaction between unmodified carbonyles would be the most attractive synthetic alternative. Proline-catalyzed intermolecular direct aldol reac- tion between acetone and 4-nitrobenzaldehyde was first reported by List…     

Quantum Chemical Study of CnAl2^± （n=1～10） Clusters： Structure and Stability

Geometries, electronic structures and vibrational frequencies of CnAl2± clusters have been investigated by using the B3LYP-DFT method in the range of n = 1～10. At the B3LYP/6-311G level, the ground state structures of CnAl2± clusters are planar or linear with terminal aluminum atom. In these structures, the C–C bonds are alternately changed between double and triple. The changing magnitude of the averaged bond length decreases with the increase of cluster size. The energetic analysis showed that CnAl2± clusters with even n are more stable than those with odd n.     

1-取代-2-氨基苯并咪唑衍生物的理论计算及QSAR研究

在B3LYP/6-31＋g(d)计算水平下, 通过运用密度泛函理论(DFT)量子化学方法, 对7种1-取代-2-氨基苯并咪唑衍生物的电子结构特征进行了研究, 获得了它们的电离能、亲合能、化学硬度、化学软度、化学势、电负性、亲电性、分配系数、折射率、极化率、分子体积和分子表面积等参数. 结果表明, 在2-氨基苯并咪唑衍生物的1位引入取代基团, 对化合物的电荷布居和结构性质都有较大的影响|关联了定量结构-活性关系(QSAR), 7种化合物的半数致死量LD₅₀与极化率等有较好的相关性. 这些结果可为1-取代-2-氨基苯并咪唑衍生物的氧化代谢实验研究和毒性机理揭示等提供重要信息.     

硝基芳烃对圆腹雅罗鱼毒性的DFT研究

对30种硝基芳烃化合物进行DFT-B3LYP/6-311G**水平全优化计算, 据所得量子化学参数分类建立了硝基苯类和硝基苯胺类化合物对圆腹雅罗鱼急性毒性(－lgEC₅₀)的定量构效关系(QSARs)模型. 结果表明, 硝基苯类化合物的毒性主要由硝基基团的电荷(Q_-NO2)和前线轨道能级差(ΔE)决定; 硝基苯胺类化合物的毒性则由分子最低未占轨道能级(E_LUMO)和ΔE决定. 苯环上取代基的类型、数目和取代位置直接影响到标题化合物的毒性大小, 强吸电子基如硝基会降低Q_-NO2和E_LUMO大小, 使化合物毒性增强, 且邻对位硝基取代的毒性高于间位取代; 相反, 给电子基团氨基的存在则会使化合物的毒性降低. 总之, 硝基是这两类化合物致毒的主要基团, 将硝基包覆或还原为氨基应为此类化合物解毒的重要途径. 最后以1,4-二硝基苯为例, 模拟了其活性亚硝基中间产物与蛋白质中还原性巯基间的反应, 并将其与硝基苯和1,3-硝基苯的反应活化能进行了比较, 讨论了不同取代基数目和位置对分子活性的影响, 结果与QSAR模型分析一致, 进一步验证了硝基芳烃化合物的致毒历程, 研究结果对品优高能炸药的分子设计也有助益.     

硝基芳烃对梨形四膜虫毒性的QSAR研究

用30种硝基芳烃化合物DFT-B3LYP/6-311G**全优化计算结构参数: 最高占有和最低未占分子轨道能级(E_HOMO和E_LUMO)、次最高占有和次最低未占分子轨道能级(E_NHOMO和E_NLUMO)、前线轨道能级差(ΔE＝E_LUMO－E_HOMO)、分子的总能量(E_T)、硝基和硝基碳上净电荷(Q_NO2和Q_C-NO2)、与卤素相连碳原子上的净电荷(Q_C-X)、分子偶极矩(μ)和分子体积(V), 结合文献中的疏水性参数(log K_ow), 按取代基类型和数目分类进行其对梨形四膜虫急性毒性(－log IC₅₀)的定量构效关系(QSARs)研究. 结果表明, 前线轨道能级对硝基芳烃毒性作用有重要贡献, 硝基芳烃对梨形四膜虫的毒性作用主要以与生物分子发生电子转移等化学反应为主, 单硝基芳烃的毒性作用还与疏水性有关. 卤素的存在增加了硝基芳烃化合物的毒性, 卤素易被亲核取代. 对30种标题物作多元线性回归, 所得模型(－log IC₅₀＝18.037＋10.446Q_NO2－41.323ΔE－20.471E_NLUMO＋24.989E_NHOMO, n＝30, R＝0.962, SE＝0.185, F＝78.640, Sig.＝0.000)具有较高毒性预测作用.     

Quantitative Correlation of Chromatographic Retention and Acute Toxicity for Alkyl（1- phenylsulfonyl） Cycloalkane Carboxylates and Their Structural Parameters by DFT

1 INTRODUCTION Quantitative structure-activity relationship (QSAR)is one of the necessary methods that could be emp- loyed to evaluate the hazards of organic chemicals. QSAR equation could be applied to predict the biological activity of unknown compounds, espe- cially for initial screening and evaluation of toxic compounds[1]. Moreover, the quantitative relation- ship between molecular structure and chromatogra- phic retention (capacity factor lgKW) could also bedeveloped to explain …