Conformational analysis of mesocyclic polythioethers : Gas phase conformational analysis of five mesocyclic polythioethers using photoelectron spectroscopy

The helium I photoelectron spectra of the mesocyclic polythioethers 1,4-dithiacycloheptane (1,4-DTCH), 1,5-dithiacyclooctane (1,5-DTCO), 1,5-dithiacyclononane (1,5-DTCN), 1,4,7-trithiacyclononane (1,4,7-TTCN), and 1,6-dithiacyclodecane (1,6-DTCD) are reported. The conformations of these molecules in the gas phase are deduced from correlations of the observed spectra with semi-empirical MO calculations, as well as molecular mechanics analysis.     

Crystal structure of olanzapinium benzoate (1:1)

Olanzapinium benzoate, 1-methyl-4-(2-methyl-10H-thieno[2,3-b][1,5]benzodiazepin-4-yl)-piperazin-1-ium benzoate, (C₁₇H₂₁N₄S)⁺(C₇H₅O₂)^? (I), crystallizes in triclinic space group P-1 with unit cell dimensions a = 9.2957(6) Å, b = 11.2416(7) Å, c = 12.0003(8) Å; α = 64.585(1)°, β = 87.568(1)°, γ = 83.248(1)°; V = 1124.8(1) ų. The asymmetric part of the structure comprises a singly charged olanzapinium cation and a singly charged benzoate anion. The central 1,5-diazepine ring adopts the expected boat conformation, while the piperazine ring favors the chair conformation. The olanzapinium and benzoate ions are linked by intermolecular N-H...O hydrogen bonds forming infinite chains running along the c-axis of the crystal.     

Synthesis and crystal structure of two derivatives of benzodiazepines

Two benzodiazepine derivatives, C₂₃H₂₂N₂O (I), 2-methyl-8-methoxy-2,4-diphenyl-2,3-dihydro-1H-1,5-benzodiazepine, and C₂₂H₁₇N₃O₂Br₂ (II), 2-methyl-7-nitro-2,4-bis(4′-bromophenyl)-2,3-dihydro-1H-1,5-benzodiazepine, were studied by single crystal X-ray diffraction method. Compound (I) crystallizes in the monoclinic system, space group P2₁/c, a = 13.1703(17) Å, b = 11.1990(14) Å, c = 12.9093(16) Å, β = 107.831(2)°, V = 1812.6(3) ų, Z = 4. Compound (II) crystallizes in the monoclinic system, space group P2₁/n, a = 11.7345(12) Å, b = 12.7477(13) Å, c = 13.5965(14) Å, β = 95.221(2)°, V = 2025.4(4) ų, Z = 4. The molecules of (I) and (II) have T-shape form with the diazepine ring at the junction point. The seven membered central benzodiazepine ring in both structures adopt a twist-boat conformation. The crystal packing is stabilized by C-H…π (in I) and C-H…O (in II) interactions.     

Metal-silicon bonded compounds : X. The molecular structures of 2,2,4,4,6,6,8,8-octamethyl-2,4,6,8-tetrasila-1,5-mercuracyclooctane and bis(triphenylsilyl) mercury

The crystal and molecular structure determinations of 2,2,4,4,6,6,8,8-octamethyl-2,4,6,8-tetrasila-1,5-mercuracyclooctane. Hg₂Si₄C₁₀H₂₈ (I) and of bis-(triphenylsilyl)mercury, (Ph₃Si)₂Hg (II), are reported. The structures have been determined from single-crystal X-ray data collected by counter methods. Both molecules crystalize in the space group P1 with one centrosymmetric molecule per unit cell. Each structure contains linear SiHgSi groups, with mercury-silicon distances of 2.490(4) Å in I and 2.503(4) Å II. In compound I the SiHgSi groups are linked by methylene bridges which form an eight member ring in the chair conformation. The cell dimensions for compound I are a 6.277(2), b 8.408(2), c 9.274(4) Å, α 92.75(3), β 94.79(3) and γ 100.14(2)° with R₁0.062 for 1809 observed reflections. The cell dimensions for compound II are a 9.999(4), b 11.727(8), c 7.654(5) Å, α 99.87(5), β 115.35(4) and γ 98.41(4)°, with R₁0.081 for 2394 observed reflections.     

A Conformational Study on Silacyclohexane. Comparison of ab initio (HF,MP2), DFT,and Molecular Mechanics Calculations. Conformational Energy Surface of Silacyclohexane

The structures and relative energies for the basic conformations of silacyclohexane 1 have been calculated using HF, RI‐MP2, RI‐DFT and MM3 methods. All methods predict the chair form to be the dominant conformation and all of them predict structures which are in good agreement with experimental data. The conformational energy surface of 1 has been calculated using MM3. It is found that there are two symmetric lowest energy pathways for the chair‐to‐chair inversion. Each of them consists of two sofa‐like transition states, two twist forms with C₁ symmetry (twist‐C₁), two boat forms with Si in a gunnel position (C₁ symmetry), and one twist form with C₂ symmetry (twist‐C₂). All methods calculate the relative energy to increase in the order chair < twist‐C₂ < twist‐C₁ < boat. At the MP2 level of theory and using TZVP and TZVPP (Si atoms) basis sets the relative energies are calculated to be 3.76, 4.80, and 5.47 kcal mol^–1 for the twist‐C₂, twist‐C₁, and boat conformations, respectively. The energy barrier from the chair to the twisted conformations of 1 is found to be 6.6 and 5.7 kcal mol^–1 from MM3 and RI‐DFT calculations, respectively. The boat form with Si at the prow (C_s symmetry) does not correspond to a local minimum nor a saddle point on the MM3 energy surface, whereas a RI‐DFT optimization under C_s symmetry constraint resulted in a local minimum. In both cases its energy is above that of the chair‐to‐twist‐C₁ transition state, however, and it is clearly not a part of the chair‐to‐chair inversion.     

The crystal structure of bicyclo [3.3.3]undecane-1,5-diol and the conformation of bicyclo[3.3.3]undecane (manxane)

The crystal structure of bicyclo [3.3.3]undecane-1,5-diol has been determined. It is monoclinic, P2₁/c, a = 12.99(2), b = 14.16(2), c = 12.50(1)A,β = 112.42(2)°, with two independent molecules in the asymmetric unit. One of these is disordered, but the other has almost exact C_3h symmetry and its conformation and precise molecular geometry agree well with previous calculations by molecular mechanics. The molecule shows considerable angle strain, having bridge angles in the range 118–121°     

Two Dieneplatinum Synthetic Reagents,Pt(C6H2F3‐2,4,6)2(cod) and Pt(C6HF4‐2,3,4,5)2(cod)

Reactions of PtCl₂(cod) (cod = cycloocta‐1,5‐diene) with 2,4,6‐trifluoro‐ and 2,3,4,5‐tetrafluoro‐phenyllithium in diethyl ether gives Pt(C₆H₂F₃‐2,4,6)₂(cod) ( 1 ) (monoclinic, P2₁/n, Z = 4, a = 7.141(1), b = 15.002(2), c = 17.071(3) Å, β = 91.37(2)°) and Pt(C₆HF₄‐2,3,4,5)₂(cod) ( 2 ) (triclinic, P 1, Z = 2, a = 10.150(2), b = 10.762(2), c = 10.812(2) Å, α = 63.606(3), β = 63.327(3), γ = 76.496(3)°) respectively, which have two ipso carbon atoms and two double bond midpoint centres in a square planar arrangement, and aromatic rings angled near perpendicular to the coordination plane.     

Cobalt metallocycles: XIII. Preparation and x-ray crystallography of cobaltacyclopentadiene and dinuclear cobalt complexes

(η-Cyclopentadienyl)(triphenylphosphine)cobaltacyclopentadienes having an electron withdrawing substituent on the cyclopentadienyl ring, (η-C₅H₄R)(PPh₃)($\text{CoCHCHC}$H) (1b: R = COOMe; 1c: R = COMe), were prepared in reasonable yields by treatment of a solution of (η-C₅H₄R)(PPh₃)₂Co with acetylene. A non-substituted cyclopentadienyl analog (1a: R = H) was also isolated in low yield according to a similar procedure. Novel dinuclear complexes were also formed as by-products and the structure of (η-C₅H₄R)Co(PPh₂$\text{C}{}_6\text{H}{}_4\text{)(μ-C}$Me)Co(η-C₅H₄R) (2b: R = COOMe), having a μ₂,η³-benzyl moiety, was determined by an X-ray crystallographic analysis. The X-ray analyses of 1a and 1b were also carried out. Crystals of 1a are monoclinic, space group Pa, a 8.529(3), b 16.010(6), c 8.028(4) Å, β 100.31(3)°, Z = 2; crystals of 1b are monoclinic, space group P2₁/a, a 8.327(2), b 36.468(7), c 8.021(1) Å, β 98.75(2)°, Z = 4; and crystals of 2b are monoclinic, space group P2₁/c, a 10.681(2), b 30.722(7), c 8.912(1) Å, β 93.55(1)°, Z = 4. They have been refined to R = 0.034, 0.047 and 0.050, respectively.     

CaMnO2.5 and Ca2MnO3.5: New oxygen-defect perovskite-type oxides

We found that when the precursors CaMnO₃ and Ca₂MnO₄ are reduced with any one of a variety of inorganic (H₂, NH₃) or organic (C₂H₄, C₃H₆) reducing agents between 300 and 500°C, topotactic reaction occurs to produce the ordered oxygen-defect phases CaMnO_2.5 and Ca₂MnO_3.5, respectively. Orthorhombic cell constants for CaMnO_2.5 are a = 5.43(1), b = 10.24(1), and c = 3.74(1) Å, and for Ca₂MnO_3.5 are a = 5.30(1), b = 10.05(1), and c = 12.24(1)Å. These compounds were characterized by powder X-ray diffraction, thermogravimetric analysis, magnetic susceptibility, and infrared spectroscopy. The reduced compounds reversibly oxidize to their respective precursor in oxygen at low temperatures.     

Etude cristallochimique de derives du chrome(0) : I. Structure cristalline et moleculaire du benzoate de methyle chrome dicarbonyle thiocarbonyle

The crystal and molecular structure of methylbenzoatechromium dicarbonyl thiocarbonyl has been determined by a single-crystal X-ray study. The compound crystallizes with two molecules in a unit cell of symmetry P$\text{1}$, with the following parameters: triclinic system, a = 7.108(3), b = 10.340(4), c = 8.523(3) Å; α = 89.75(6), β = 95.89(4), γ = 105.50(4)°; V = 601 ų; d_m = 1.57 ± 0.05, d_c = 1.56. The structure has been refined to R and R″ values of 0.030 and 0.038 respectively, for 1963 independent reflections. The main feature of the molecule is the C_s symmetry of the Cr(CO)₂CS group with a CrC(S) bond length of 1.792(2) Å, shorter than the CrC(O) bond length, mean: 1.849(3) Å.     

Neutron and X-ray diffraction study on polymorphism in lithium orthotantalate,Li3TaO4

The structures of the low-and high-temperature modifications of lithium orthotantalate, Li₃TaO₄, have been determined by neutron and X-ray diffraction methods. The low-temperature, or β, phase has symmetry $\text{C2}\text{c}$ and lattice parameters a₁ = 8.500(3), b₁ = 8.500(3), c₁ = 9.344(3)Å, and β = 117.05(2)°. The high-temperature, or α, phase has symmetry P2 and lattice parameters a_h = 6.018(1), b_h = 5.995(1), c_h = 12.865(2)Å, and β_h = 103.53(2)°. Both structures are ordered. The β-phase has a rock salt-type structure with a 3 : 1 ordering of the Li⁺ and Ta⁵⁺ ions. Its structure can be generated from the low-temperature modification by means of a complex pattern of shifts of the Ta⁵⁺ ions.     

A phase-analytical study of the TlCuSe system

High-temperature silica-tube syntheses and room-temperature copper extraction experiments of the single phases found with the former technique have established five new ternary phases in the TlCuSe system. The compositions were determined by microprobe analysis. The new phases have been crystallographically characterized by means of single-crystal and powder diffraction: TlCu₃Se₂ (CsAg₃S₂ type),a = 15.2128(7)Å,b = 4.0115(2)Å,c = 8.3944(4)Å, β = 111.700°(4); Tl₅Cu₁₄Se₁₀ (new type),C2/m?)a = 18.097(2)Å,b = 3.9582(2)Å,c = 18.118(2)Å, β = 116.089°(7); TlCu₅Se₃ (new type,P4¯n2?),a = 12.9023(2)Å,c = 3.9905(1)Å; TlCu_5−xSe₃ (new type,Pnn2?),a = 12.43(1)Å,b = 12.80(1)Å,c = 3.93(1)Å; TlCu₇Se₄ (NH₄Cu₇S₄ type),a = 10.4524(2)Å,c = 3.9736(1)Å. The latter phase may be considered as stoichiometric crookesite.     

Synthesis and structure determination of MIL-10: A monodimensional metallodiphosphonate formulated MIVO{O3P-CH2-PO3}(NH4)2 (M = Ti,V)

In the view of synthesizing microporous composite compounds, the ternary systems NH₄VO₃: alkyldiphosphonic acid:H₂O were hydrothermally investigated. Using the methylendiphosphonic acid, the mixture corresponding to the molar ratio 1:0.3:500 heated three days at 200 °C, leads to small platelets whose structure was determined by single crystal X-ray diffraction. Their symmetry is orthorhombic (space group Pnma (n° 62)) with lattice parameters: a = 7.3182(1) Å, b = 16.5633(1) Å, c = 7.5225(2) Å, V = 911.83(4) ų, Z = 4. The compound labelled MIL-10, is formulated V^IVO{O₃P-CH₂-PO₃}(NH₄)₂, and shows a monodimensional structure characterized by the presence of polyhedral chains between which ammonium cations are located. The isostructural titanium compound was also hydrothermally synthesized. Its structure was solved from single crystal data; its symmetry is orthorhombic (space group Cmcm (n° 63)) with lattice parameters: a = 16.462(1) Å, b = 7.7671(6) Å, c = 7.2830(6) Å, V = 931.2(1) ų, Z = 4.     

Crystal Structures of rac-Methyl- (3R*, 3aS*, 4R*, 7R*, 7aR*)-7-Acetoxymethyl)-3-benzyl-4,5-dimethyl-1-oxo-3a,4,7,7a-tetrahydroisoindoline-7a-carboxylate

The X-ray structures of the compounds 4 and 2 have been determined by direct methods and refined by least squares techniques. Crystals of C₂₂H₂₇NO₅ and C₂₇H₂₇NO₅ are triclinic, space groups Pī with lattice parameters a = 13.652 (5) Å, b = 10.926 (3) Å, c = 7.755 (2) Å, a = 111.554 (4) Å, β = 85.541 (3) Å, γ = 104.813 (4) Å, and a = 15.394 (4) Å, b = 9.674 (3) Å, c = 8.522 (3) Å, a = 111.04 (4) Å, ß = 93.65 (4) Å, γ = 95.01 (4) Å, respectively.     

Crystal structures of 2-ferrocenylmethylidenehydrazono-1,3-dithiane and 2-ferrocenylmethylidenehydrazono-1,3-dithiepane

Two compounds of 2-ferrocenylmethylidenehydrazono-1,3-dithiane (1) and 2-ferrocenylmethylidenehydrazono-1,3-dithiepane (2) are synthesized and their single crystal structures are determined by the X-ray diffraction method. Compound 1 belongs to the orthorhombic Pca2₁ space group with the cell parameters: a = 13.989(4) Å, b = 5.785(2) Å, c = 18.231(5) Å, V = 1475.4(7) ų; while compound 2 crystallizes in a monoclinic symmetry, P2₁/c space group with a = 15.320(2) Å, b = 5.8028(6) Å, c = 36.584(4) Å, β = 91.932(1)° and V = 3250.4(6) ų.     

Crystal structures and antibacterial activity of hydrazone derivatives from 1H-indol-3-acetohydrazide

A series of three new hydrazone derivatives C₂₂H₁₉N₃O₂ (1), C₁₇H₁₃ClN₄O₃ (2), and C₂₁H₂₄N₄O₂·CH₄O (3) obtained by the condensation of ¹H-indol-3-acetohydrazide with 2-methoxynaphthaldehyde, 2-chloro-5-nitrobenzaldehyde, and 4-diethylaminosalicylaldehyde, respectively, in methanol, ia prepared. The compounds are characterized by elemental analysis, IR spectra, ¹H NMR spectra, and single crystal X-ray diffraction. Compound 1 crystallizes in the monoclinic space group P2₁/n with unit cell dimensions a = 17.740(2) Å, b = 5.621(1) Å, c = 18.573(3) Å, β = 92.659(2)°, V = 1850.0(6) ų, Z = 4, R ₁ = 0.0610 and wR ₂ = 0.1155. Compound 2 crystallizes in the monoclinic space group C2/c with unit cell dimensions a = 29.178(2) Å, b = 8.195(1) Å, c = 14.372(1) Å, β = 109.446(2)°, V = 3240.5(5) ų, Z = 8, R ₁ = 0.0452 and wR ₂ = 0.1028. Compound 3 crystallizes in the monoclinic space group Pc with unit cell dimensions a = 6.579(1) Å, b = 15.112(2) Å, c = 10.676(2) Å, β = 90.030(2)°, V = 1061.4(3) ų, Z = 2, R ₁ = 0.0535 and wR ₂ = 0.1123. The single crystal X-ray structural determination reveals that the molecules of the compounds are much twisted due to the lack of efficient conjugation. Preliminary biological tests indicate that the compounds are effective antibacterial material.     

Structure of a new compound synthesized by microwave heating: [H3N(CH2)6NH3)]·AlF5

A new hybrid material was synthesized by the microwave route from a mixture of Al₂O₃/HF/1,6 diaminohexane/EtOH. The structure of the hybrid fluoroaluminate, determined by single crystal X-ray diffraction, reveals a [H₃N(CH₂)₆NH₃]·AlF₅ formulation and a monoclinic symmetry with the space group P2₁, with a=7.898(1) Å, b=5.514(1) Å, c=12.672(3) Å, β=103.69(2)°, V=536.2(2) ų and Z=2. The unit cell contains infinite inorganic chains of [AlF₆] corner-sharing octahedra, linked each other by hexanediammonium cations.     

X-ray and mössbauer studies of tricyclohexyltin(IV) halides. The crystal structures of (cyclo-C6H11)3SnX (X = F,Br and I)

The structures of tricyclohexyltin fluoride (I), bromide (II) and iodide (III) have been determined by X-ray analysis. Compound I crystallizes in the space group P2₁/m with a = 10.422(6), b = 17.238(9), c = 5.769(3) Å, β = 104.6(1)° and Z = 2. Compounds II and III crystallize in the space group Pcmn with a = 10.427(6), b = 16.914(9), c = 11.366(6) Å, Z = 4; and a = 10.400(6), b = 16.900(10), c = 11.400(4) Å, Z = 4, respectively. All three structures consist of discrete tetrahedral (cyclo-C₆H₁₁)₃SnX units.The temperature dependence of the Mössbauer resonance areas has been examined in order to obtain information about the relationship between chemical structure and lattice dynamics.     

Crystal structures of pyridine-4-aldehyde thiosemicarbazone perchlorate and trifluoromethane sulfonate

The new salts of pyridine-4-aldehyde thiosemicarbazone: perchlorate (I) and trifluoromethane sulfonate (II) HN⁺C₅H₄-CH=N-NH-C(S)-NH₂·X^? (X = ClO₄, CF₃SO₃) were synthesized and studied by IR and NMR spectroscopy and X-ray diffraction analysis. The compounds were synthesized by a reaction of pyridine-4-aldehyde thiosemicarbazone with chloric or trifluoromethane sulfonic acid, respectively. Compound I crystallized in the triclinic crystal system, space group P-1, a = 6.8691(2) Å, b = 9.5406(4) Å, c = 9.6348(4) Å, α = 78.838(1)°, β = 77.618(1)°, γ = 69.661(1)°, Z = 2. Compound II crystallized in the monoclinic crystal system, space group P2₁/c, a = 7.3149(8) Å, b = 11.9830(16) Å, c = 15.143(2) Å, β= 96.949(4)°, Z = 4. The structures are formed by hydrogen-bonded ions. Moreover, the cations are linked in “dimmers” due to the weak N-H...S hydrogen bonds.     

Metallacycloalkanes: I. Preparation and characterisation of α,α′-bipyridyl-5-nickela-3,3,7,7-tetramethyl-trans-tricyclo[4.1.0.02,4]heptane

Oxidative addition of 2 molecules of 3,3-dimethylcyclopropene (I) to α,α′-bipyridyl(1,5-cyclooctadiene)nickel(0) (III) gave the title compound (IV) in over 90% yield. Complex IV was characterized by mass, ¹H NMR and ¹³C NMR spectroscopy. Its structure was determined by X-ray diffraction (a 13.7081(2), b 14.638(2), c 9.5139(1) Å, β 110.82(1)°, C2/c, R = 0.05 for 1614 reflections).