Impact of ligand protonation on eigen-type metal complexation kinetics in aqueous systems

The impact of ligand protonation on metal speciation dynamics is quantitatively described. Starting from the usual situation for metal complex formation reactions in aqueous systems, i.e., exchange of water for the ligand in the inner coordination sphere as the rate-determining step (Eigen mechanism), expressions are derived for the lability of metal complexes with protonated and unprotonated ligand species being involved in formation of the precursor outer-sphere complex. A differentiated approach is developed whereby the contributions from all outer-sphere complexes are included in the rate of complex formation, to an extent weighted by their respective stabilities. The stability of the ion pair type outer-sphere complex is given particular attention, especially for the case of multidentate ligands containing several charged sites. It turns out that in such cases, the effective ligand charge can be considerably different from the formal charge. The lability of Cd(II) complexes with 1,2-diaminoethane-N,N'-diethanoic acid at a microelectrode is reasonably well predicted by the new approach.     

Eigen kinetics in surface complexation of aqueous metal ions

The mechanism of chemisorption of aqueous metal ions at surfaces has long been a topical issue in such fields as soil chemistry and bioenvironmental science. Here it is quantitatively demonstrated for the first time that release of water from the inner hydration shell is the rate-limiting step in inner-sphere surface complexation. The reactive intermediate is an outer-sphere complex between metal ion and surface site, with an electrostatically controlled stability defined by Boltzmann statistics. Using tabulated dehydration rate constants for metal ions, the resulting scheme allows for prediction of rates of sorption of aqueous metal ions at any type of complexing surface.     

Impact of ligand protonation on virtual screening against beta-secretase (BACE1)

Structure-based virtual screens were carried out against beta-secretase (BACE1) to investigate the impact of ligand protonation on screening efficacy. A comparative evaluation of the performance and its dependence on ligand protonation states docking by Surflex, eHiTS, GOLD, and FlexX-Pharm was performed. Virtual screening performed by FlexX-Pharm (EF(1%)=69) and Surflex (EF(1%)=58) provided the best efficiency. Screening protocols by FlexX-Pharm and GOLD were affected by ligand protonation, while performance of Surflex did not depend on ligand protonation.     

Evaluation of metal complexation as an alternative to protonation for electrospray ionization of pharmaceutical compounds

The use of pyridyl and polyether compounds as auxiliary ligands to promote metal complexation of a series of pharmaceutical analytes by electrospray ionization (ESI) is explored as an alternative to conventional protonation by ESI. The auxiliary ligands vary in the number and nature of binding sites, the orientation of the binding sites with respect to each other, and the conformational flexibility of the ligand during complexation of the metal ion. The ESI of ternary solutions composed of a pharmaceutical substrate, a transition metal ion salt, and an auxiliary complexation agent generate metal complexes of the type [(L-H⁺)M^II(aux)]⁺, where L is the pharmaceutical, M is either copper, nickel, or cobalt, and aux is the auxiliary ligand. Overall, the pyridine-type ligands are more useful for the generation of ternary metal complexes than the polyether-type ligands, which preferentially complex sodium ions and, upon collisional activation, undergo fragmentation of the polyether skeleton in addition to the structurally informative dissociation of the analytes. The auxiliary ligand that exhibits the best performance is 2,2′-dipyridine; its ternary metal complexes enhance the structural characterization of five of the pharmaceuticals by promoting a greater number of fragments relative to the CAD patterns of the protonated substrates.     

The kinetics of cobalt(II) complexation with o-phthalate in aqueous solution

The rate constants for the formation and dissociation of cobalt(II) complexes with o-phthalate in aqueous solution have been determined by a pressure-jump technique. The forward and reverse rate constants obtained are k_f = 1.1 x 10⁶ M⁻¹ s⁻¹ and k_r = 1.6 x 1O³ s⁻ at 25°C, respectively. The activation parameters of the reaction were also obtained from the temperature variation study. The results indicate that chelate ring closure and rupture are affected by the rigidity of the benzene ring of the ligand, and thus the rate determining step of the reaction is the chelate ring closure process.     

Allosteric anion recognition by metal complexation of tris(bipyridine-imidazolium) ligand

A new tripodal imidazolium ligand 2 comprising three 2,2′-bipyridine-imidazolium subunits connected through a mesityl spacer has been synthesized and 1:1 complexes of 2 with Fe(II) and Ru(II) ions have been prepared. ¹H NMR spectroscopy including NOE analysis and molecular modeling study established that the complexes exist as a pseudocryptand type twisted structure in solution. The Fe(II) and Ru(II) complexes show strong 1:1 binding of Cl⁻, Br⁻, and I⁻ anions in MeCN-d₃ with a large enhancement of the guest selectivity (Cl⁻ > Br⁻ > I⁻) upon metal complexation.     

Conformations, protonation sites, and metal complexation of benzohydroxamic Acid. A theoretical and experimental study

A theoretical and experimental study on the structure and deprotonation of benzohydroxamic acid (BHA) has been performed. Calculations at the RHF/cc-pVDZ level, refined by the B3LYP/AUG-cc-pVDZ method, indicate that, in the gas phase, Z amide is the most stable structure of both neutral and deprotonated BHA. (1)H-(1)H nuclear Overhauser enhancement spectroscopy and (1)H-(1)H correlation spectroscopy spectra in acetone, interpreted with ab initio interatomic distances, reveal that BHA is split into the Z and E forms, the [E]/[Z] ratio being 75:25 at -80 degrees C. The formation of E-E, Z-Z, and E-Z dimers has been detected; in the presence of water, the dimers dissociate to the corresponding monomers. The rates of proton exchange within the Z and E forms and between E and Z were measured by dynamic (1)H NMR in the -60 to 40 degrees C temperature range; an increase in water content lowers the rate of exchange of the E isomer. The effect of D(2)O on the NMR signals indicates a fast hydrogen exchange between D(2)O and the E and Z amide forms. The sequence of the acid strength at low temperatures is (N)H(E)) approximately (O)H(E) < (O)H(Z) approximately (N)H(Z). The kinetics of complex formation between BHA and Ni(2+), investigated by the stopped-flow method, show that both neutral BHA and its anion can bind Ni(2+). Whereas the anion reacts at a "normal" speed, the rate of water replacement from Ni(H(2)O)(6)(2+) by neutral BHA is about 1 order of magnitude less than expected. This behavior was interpreted assuming that, in aqueous solution, BHA mainly adopts a closed (hydrogen-bonded) Z configuration, which should open (with an energy penalty) for the metal binding process to occur.     

Impact of metal cation complexation and protonation on tautomeric and resonance forms of the oxaalkyl Schiff bases derived from 5-substituted salicylaldehyde and 2-hydroxy-1-naphthlaldehyde

Structures of the main resonance and tautomeric forms of three Schiff bases of 2-hydroxy-1-naphthaldehyde (1OXA), 5-bromosalicylaldehyde (2OXA) and 5-nitrosalicylaldehyde (3OXA) with 1,8-diamine-3,6-dioxaoctane, before and after protonation and complexation of monovalent metal cations, have been studied by FTIR, ¹H, ¹³C and ¹⁵N NMR methods. The spectroscopic investigations provided clear evidence that the Schiff bases exist in acetonitrile solution as three different tautomers: 1OXA in enamine-oxo, 2OXA in imine-hydroxy and 3OXA in a low-barrier O···H···N imine-oxo forms. It was found on the basis of multinuclear NMR studies, that in solid state, the enamine-oxo and imine-hydroxy tautomers are formed exclusively, but not the untypical imine-oxo tautomer, which requires strong stabilisation by solvent molecules in solution. MOG-PM6 calculations of the different tautomers allowed visualisation of their energetically the most favourable structures. Protonation of 1OXA–3OXA Schiff bases leads to formation of common forms, i.e. protonated imine-hydroxy structure, irrespectively of the structure of tautomer before protonation. In turn, coordination of monovalent metal cations implies common formation of zwitterionic forms within all studied ligands in solution. Application of FT-IR and NMR titrations in combination with ESI MS spectrometry revealed the nature and the structure of OXA complexes, whose formation is impeded by the intra- and intermolecular interactions. MOG-PM6 calculations allowed visualisation of Li⁺ and Na⁺ metal coordination sphere geometries within structure of all investigated complexes, stabilised by intermolecular interactions with solvent molecules.     

Rhenium oxo complexes of a chelating diyne ligand. Synthesis and study of the kinetics of protonation

A series of oxo complexes, Re(O)X(diyne) (X = I, Me, Et), have been prepared from 2,7-nonadiyne and Re(O)I(3)(PPh(3))(2). Addition of B(C(6)F(5))(3) to Re(O)I(2,7-nonadiyne) (5) results in coordination of the oxo ligand to the boron. The protonation of Re(O)(X)(2-butyne)(2) and Re(O)(X)(2,7-nonadiyne)(2) with a variety of acids has been examined. With 5 and HBF(4)/Et(2)O, the ultimate product was [Re(CH(3)CN)(3)(I)(2,7-nonadiyne)](2+) (7). The conversion of 5 to 7 changes the conformation of the diyne ligand from a "chair" to a "boat" and shifts its propargylic protons considerably downfield in the (1)H NMR. The kinetics of the protonation of Re(O)I(2,7-nonadiyne) (5) by CF(3)SO(3)H in CH(3)CN have been monitored by visible spectroscopy, in a stopped-flow apparatus, and by low temperature (1)H NMR. Two second-order rate constants, presumably successive protonations, were observed in the stopped-flow, k(1) = 11.9 M(-)(1) s(-)(1) and k(2) = 3.8 M(-)(1) s(-)(1). Low temperature (1)H NMR spectroscopy indicated that the resulting solution contained a mixture of two doubly protonated intermediates X and Y, each of which slowly formed the product 7 via an acid-independent process.     

The potentiometric study of maleic acid complexation with the alkaline-earth metal ions in aqueous solutions

The potentiometric titration was used to study the process of complex formation of maleic acid (H₂L) with the alkaline-earth metal ions at the ionic strength 0.1 and T = 298 K. The following logarithmic stability constants of maleic acid complexes were obtained: logβ_MgL = 1.79 ± 0.11, logβ_CaL = 1.91 ± 0.05, logβ_SrL = 1.89 ± 0.09, logβ_BaL = 1.94 ± 0.10.     

Salt effects on the protonation and on alkali and alkaline earth metal complex formation of 1,2,3-propanetricarboxylate in aqueous solution

The protonation of 1,2,3-propanetricarboxylate (tricarballylate, tca) was studied in LiCl, NaCl, KCl, MgCl(2), CaCl(2) and tetraethylammonium iodide (Et(4)NI) aqueous solutions, at 25 degrees C, in the ionic strength range 0 < I < 1M, using the pH-metric technique. The differences between protonation constants determined in Et(4)NI and those determined in the other background salts were interpreted in terms of complex formations. Least squares calculations are consistent with the formation of MLH(j) (j = 0,1.2), M(2)LH(i) (i = 0,1,2), M(2)L species, when M = Mg(2+), Ca(2+). Potentiometric measurements performed in mixed NaClKCl, NaClCaCl(2) and MgCl(2)CaCl(2) solutions showed the formation of mixed metal complexes NaKL, NaKHL, NaCaL and CaMgL. The dependence on ionic strength of protonation and complex formation constants was evaluated using a simple Debye-Hückel type equation.     

Micelle nano-reactors as mediators of water-insoluble ligand complexation with Cu(II) ions in aqueous medium

Complexation reactions between water-soluble and -insoluble reactants were shown to occur in aqueous media in the presence of normal or reverse surfactant micelles, in significantly higher yields at lower temperatures compared to those achieved in neat organic solvents. The highest yield enhancement in the complexation of novel water-insoluble bis(2-amino-1,3,4-thiadiazolyl)methane and 1,4-bis(2-amino-1,3,4-thiadiazolyl)benzene ligands with Cu(II) ions was achieved in the sodium bis(2-ethylhexyl)sulfosuccinate (AOT)-heptane-water reverse micellar system at the hydration ratio of 15. The results revealed that AOT normal micelles cause a change in the reaction mechanism together with the enhancement of the complex formation. The observed micellar effects were rationalized on basis of the properties of bulk solvents, surfactants and ligands, considering the solvation and hydration ratios of reverse micelles. The results have proved the dependence of complex yield on the amount and accordingly also on the properties of water in the micellar core, indicating that the yield can be maximized by the optimization of the hydration ratio.     

Influence of protonation on physico-chemical properties of metal extractants

Summary The protonation constants of several metal extractants, especially hydroxamic acids have been determined by a solvent extraction method. The influence of the acidity on the solubility and the distribution ratio has been studied. A plot correlates the protonation behaviour of these metal extractants with the Hammett Acidity Function, H_o. The protonation constant is useful to explain the acid catalysed hydrolysis rate of these metal extractants and to determine the extraction coefficients of their metal chelates.     

Does phosphoryl protonation occurs in aqueous phosphoesters solutions

Ionisation of trimethylphosphate (TMP), dimethylphosphate (DMP) and diethylphosphate (DEP) is investigated by acidic titration in water by Raman (R), Fourier transform infrared (FTIR) and nuclear magnetic resonance (NMR) spectroscopies. The vibrational frequencies of the PO(2)(-) ionic form and the neutral form were found in accord with the literature. While increasing further H(+) concentration, the PO band disappears in the benefit of new ones. These results, together with deuteration experiments indicate the presence of a new ionic form positively charged with general formula R(1)R(2)R(3)P(OH)(+) or R(1)R(2)P(OH)(+)(2). The pK of this phosphonium entities is lying in the range -2, -4. These results were confirmed by (31)P NMR titration. The occurrence of such a phosphonium ion in aqueous solutions might be of crucial importance for biochemical reactions and interactions, owing to the large spread of phosphoryl group in biomolecules and keeping in mind that intracellular compartments are more likely concentrated media with little free water than real aqueous solutions. Furthermore, pK's can be shifted by physical-chemical parameters like dielectric constant and electric field. This may involve at least fractional positive charge apparition that might be important in biochemical regulation by charge-charge and charge-dipole interactions. This finding will gain to be further explored on more complex molecules like phospholipids, nucleic acids and proteins.     

Spectrometric study of the oligodeoxyribonucleotide protonation in aqueous solution

UV absorption spectra and circular dichroism spectra of aqueous solutions of cytosin- and thyminecontaining single-stranded Oligodeoxyribonucleotide 5′-CCTTTCCTTTTCCTTTCC-3′(ckit4) were measured at various pH in the range 3.3–8.9. The chemometric analysis of the multiinstrumental data matrix was carrie out. The diagrams of relative contents of complex forms of the DNA molecule absorbing in the studied wavelength range (220–320 nm) were constructed by the ALS-MCR soft simulation procedure without initial postulation of their chemical compositions. The model of equilibrium complex formation describing observed changes in the spectra depending on the solution acidity was developed on the basis of the matrix method. Intrinsic protonation constants of the oligonucleotide ckit4 were calculated. The formation of intramolecular complexes between cytosine C.C+ bases in the studied DNA molecule is of a cooperative nature, and thei subsequent protonation is an anticooperative process.     

Solubility of rare earth metal bromides and iodides in aqueous systems

Abstract  

The International Union of Pure and Applied Chemistry (IUPAC) project of collection, compilation, and critical evaluation of solubility data of bromides and iodides of the scandium group and all lanthanides in water and aqueous systems containing either halide acids, halide salts, or organic compounds is under preparation. As a result of their similarity to the chlorides, which were recently evaluated, the bromides and iodides in the lanthanide series should show some regularities in their solubility data. Unfortunately, the corresponding results show a large scatter when ordered according to the atomic number. Thus, it is complicated to select the best data for recommendation. Reasons for the inaccuracy of solubility measurements are outlined. In fact some solubility values of bromides predicted by correlation with chlorides seem to be more reliable than the experimental ones. As sufficient experimental data at various temperatures were available, the water-rich fragment of the LaBr₃–H₂O equilibrium phase diagram has been formed and depicted. It seems to be similar to the well-known LaCl₃–H₂O diagram. Several regularities, with respect to stoichiometry and solubility of compounds formed, were observed during investigations of the aqueous ternary systems. The complex iodides of various lanthanides display more regularities in their properties than the bromides do.     

Anion-exchange studies of metal thiocyanates in aqueous and mixed solvent systems

The anion-exchange behaviour of metal ions in aqueous NH(4)CNS and aqueous NH(4)CNS-organic solvent mixtures has been studied. The effect of the pH and the concentrations of thiocyanate and organic solvent on the distribution coefficients has been investigated. Fifteen binary metal ion separations are reported.