Globin chain separation by SDS polyacrylamide gel electrophoresis. Simple screening method for elongated hemoglobin chains

A simple method for the separation of hemoglobin chains from hemolysate or globin, by sodium dodecyl sulfate polyacrylamide gel electrophoresis, is described. The alpha, beta, and gamma chains can be clearly separated from each other. The alpha chain has the highest mobility, the beta chain has a slower mobility than the gamma chain, while the delta chain has about the same mobility as the beta chain. Hemoglobins with elongated chains can easily be detected by this method. Tak-beta, elongated by 11 residues, moves much more slowly than betaA but is much faster than alpha Constant Spring which is elongated by 31 residues. Screening of several individuals with slow-moving hemoglobins using this method led to the finding of a case with Hb Tak-beta thalassemia and other carriers of Hb Tak.     

Quantities of adult, fetal and embryonic globin chains in the blood of eighteen- to twenty-week-old human fetuses

The prenatal diagnostic program, established at Hacettepe University in Ankara for the purpose of detecting beta-thalassemia (beta-thal), sickle cell anemia (SS), and Hb S-beta-thal, offered the opportunity of evaluating the relative quantities of adult (beta A, beta S), fetal (G gamma, A gamma, A gamma T), and embryonic (epsilon, zeta) chains in 26 fetuses, aged 18-20 weeks. Methodology involved micro high-performance liquid chromatographic (HPLC) procedures and immunology using an mAb, specific for the embryonic epsilon chain. A good correlation was observed between the beta/gamma in vitro chain synthesis ratio and the level of beta A and/or beta S chains determined by reversed-phase HPLC; the combination of these two sets of data strengthens the prenatal diagnostic approach of detecting beta-thal major but not beta-thal trait. The levels of the different gamma chains were about as observed in newborn babies; the frequency of the A gamma T variant in the 26 fetuses was the same as observed for a larger group of Turkish newborn babies. The level of the embryonic zeta chain was higher than seen in full-term babies and varied between 0 and 1.3%; 5 of the 26 fetuses showed the complete absence of zeta. The embryonic epsilon chain was not detectable, not even in babies with beta-thal major. These data indicate that the synthesis of epsilon is completely turned off in fetuses at the age of 18-20 weeks, while that of zeta continues, albeit at a low level.     

Analysis of the globins from fast human haemoglobins by isoelectrofocusing on polyacrylamide gel rods

The globins from all fast haemoglobin (Hb) components obtainable by Bio-Rex 70 cation-exchange chromatography were examined by isoelectrofocusing on polyacrylamide gel rods with 8.0 mol/l urea. From this analysis HbA1a1 and HbA1a2 seem to be very heterogeneous components. HbA1b is separable into two components, one of which is varied in both the beta chains. Between HbA1b2 and the well-known HbA1c components two chromatographic peaks are separated, one with a noticeable percentage of glucosylated beta chain and one that probably contains HbF. HbA1c has both beta chains glucosylated, while HbA1x seems to be a beta monoglucosylated Hb form. Finally, the early part of the HbAo peak has a large amount of glucosylation on both alpha and beta chains.     

Investigation of the tetramer-dimer equilibrium in haemoglobin solutions by high-performance size-exclusion chromatography on a diol column

High-performance size-exclusion chromatography on a diol grafted column was applied to study the tetramer-dimer equilibrium in haemoglobin solution. Human haemoglobin A, isolated alpha A and beta A subunits and haemoglobin variants with structural modifications located at the interface between subunits were used as models. The elution volume of the subunits was found to deviate strongly from that expected from only a gel permeation mechanism and therefore ionic interactions are likely to participate in the protein retention. Experimental results and computer simulation indicate that the individual elution bands corresponding to the discrete components (tetramer, dimer, monomer) can be resolved under certain conditions. In general both the equilibrium and kinetic interconversion parameters must be considered. Single tetramer elution bands were observed from haemoglobin in the concentration range measurable, although the influence of dimers could be seen in the shape and shift of the profile. beta Chains showed resolved peaks for the tetramer-dimer forms.     

Detection of the embryonic zeta chain in blood from newborn babies by reversed-phase high-performance liquid chromatography

Reversed-phase high-performance liquid chromatography (RP-HPLC) using the large-pore Vydac C4 column has been used to detect and quantitate the embryonic zeta chain in blood samples of normal babies and of newborns with varying degrees of alpha chain deficiencies. The zeta chain eluted at the end of the chromatogram at about 130 min using a modified and extended gradient. Its identity was confirmed by structural analysis of zeta chain isolated from a blood sample of a fetus without active alpha globin genes, i.e. with hydrops fetalis (--/--). The quantity of zeta in normal babies is less than 0.7% [% of (alpha + zeta)] and is dependent upon the maturity of the baby as it was only present in babies with low levels of beta chain or hemoglobin (Hb) A. The presence of a zeta globin gene deletion [A. E. Felice et al., Hum. Genet., 73 (1986) 221; and P. Winichagoon et al., Nucleic Acids Res., 10 (1982) 5853] did not affect the level of zeta in the newborn. All babies with an alpha-thalassemia-2 heterozygosity, i.e. with three active alpha globin genes or -alpha/alpha alpha, had zeta in a range of 0.1-0.9%; again the level showed a negative correlation with that of the beta chain. Newborns with an alpha-thalassemia-2 homozygosity or -alpha/-alpha had a varying level of zeta of 0.3-2.3%, which did not correlate with the level of beta, suggesting that zeta chain production persists after birth in this condition. Macrochromatographic analyses in combination with RP-HPLC indicated that the zeta chain is present as zeta 2 gamma 2 or Hb Portland-I, as expected.     

Application of high-performance liquid chromatographic methodology to the analysis of hemoglobins synthesized in erythroid progenitor cells

High-performance liquid chromatography (HPLC) has been successfully used in the quantitation of the relatively minute amounts of hemoglobin types recovered from in vitro cultures of hemoglobin-synthesizing erythroid progenitor (BFU-E) cells. This reversed-phase HPLC method uses the Vydac C4 column and water-acetonitrile-trifluoroacetic acid as mobile phases; it has been applied to the study of fetal hemoglobin synthesis patterns in ten homozygous sickle cell anemia patients and a similar number of their heterozygous relatives along with a few normal control subjects. A significant increase in the total gamma chain level was observed in the BFU-E lysate samples corresponding to the whole blood lysates of all the patients and their heterozygous relatives, except in one patient with the beta S haplotype Mor. On the other hand, the relative level of the G gamma chains appeared to be decreased in the BFU-E lysate samples of all except the individuals carrying the Mor haplotype, where it is reversed. The method has considerable advantages over other chromatographic and electrophoretic procedures; it is extremely sensitive and allows quantitation of all different globin chains in one single chromatogram.     

Elastic properties of swollen polyelectrolyte gels in aqueous salt solutions

The elastic relaxation responding to a uniaxially stretched poly(acrylic acid) rodlike gel in the aqueous NaCl solution was investigated. The relaxation elucidated the shear (mu) and bulk (K) moduli and the frictional coefficients (sigma) of the fully ionized gel at pH above 9 as functions of the degree of swelling, which was controlled by the NaCl concentration (C(S)) of the solution. Two gels, cross-linked chains of which consist of 500 (GelA500) and 50 (GelA50) monomeric units, were examined to investigate the effect of the chain length on the elastic behavior. The moduli of GelA500 increased with swelling at C(S) below 100 mM and decreased at C(S) above it. The mu values of both gels can be characterized by the power function of gel diameter, d as mu proportional, variantd(beta). The beta values being -1 at C(S) above 100 mM transitionally changed to 1.2 at C(S) about 100 mM. That is, the dimensionality of space for the chains to distribute, n(dim) [= (beta+5)/(beta+2) according to the conventional theory [Sasaki et al., J. Chem. Phys. 102, 5694 (1995)]], changed from 4 (n(dim) of ideal chain) to 1.9 at C(S) = 100 mM. This indicates that the electrostatic repulsion between gel chains reduces the n(dim) at C(S) below 100 mM but not at C(S) above it. It was found that the K values of GelA500 were well described by the conventional theory but those of GelA50 not. The sigma(zr)/sigma(rr) (sigma(zr) is an off-diagonal element of the friction coefficient tensor and sigma(rr) is a diagonal element of the friction coefficient tensor) was found to be 2.7 x 10(-2), which was the same as the previously reported value for the swollen poly(acrylamide) gel [Sasaki, J. Chem. Phys. 120, 5789 (2004)]. The sigma(rr) of unit volume of the GelA500 is well explained by the free draining model while the sigma(rr) of GelA50 is less than that of the free draining model, suggesting the slip between water and ionized chain.     

Structures of the chain metaphosphates NaM(PO3)3 (M = Ca or Sr)

Solid-state (23)Na and (31)P magic-angle spinning nuclear magnetic resonance spectroscopy and X-ray crystallography have been used to study the structures of the chain metaphosphates NaCa(PO(3))(3) and NaSr(PO(3))(3). The compounds are isostructural and crystallise in space group P(-1) with the following parameters: NaCa(PO(3))(3), a = 6.711 A, b = 6.934 A, c = 7.619 A, alpha = 83.44 degrees , beta = 81.41 degrees , gamma = 82.80 degrees ; NaSr(PO(3))(3)a = 6.805 A, b = 7.133 A, c = 7.720 A and alpha = 83.71 degrees , beta = 80.48 degrees , gamma = 82.87 degrees . Both structures contain anionic metaphosphate chains of (PO(3))(n) (n) with ionic contacts to Na(+) ions in distorted octahedral sites and Ca(2+) (or Sr(2+)) in distorted dodecahedral sites. (31)P and (23)Na NMR are entirely consistent with the crystallographic data and an empirical method for assigning (31)P resonances to particular crystallographically unique P atoms is described.     

Thermal Stability of Haemoglobin Solutions Under DC and AC Magnetic Field and UV and IR Radiation

The influence of electromagnetic field in wide range of frequency (extra low frequency magnetic field, monochromatic laser light 840 nm, ultraviolet light) and static magnetic field on the stability of aqueous and NaCl 0.9% haemoglobin solutions was studied using differential scanning calorimetry (DSC) method. Three steps of denaturation process can be derived from experimental data. The shifts of transition temperatures are more marked for NaCl 0.9% than for aqueous solutions. The results suggest that static magnetic field is effective in protecting protein, while ultraviolet radiation destabilises haemoglobin. The laser light and alternating magnetic field have a little effect on the thermal stability of haemoglobin. This revised version was published online in July 2006 with corrections to the Cover Date.     

Gas-phase models of gamma turns: effect of side-chain/backbone interactions investigated by IR/UV spectroscopy and quantum chemistry

The conformations of laser-desorbed jet-cooled short peptide chains Ac-Phe-Xxx-NH2 (Xxx=Gly, Ala, Val, and Pro) have been investigated by IR/UV double resonance spectroscopy and density-functional-theory (DFT) quantum chemistry calculations. Singly gamma-folded backbone conformations (betaL-gamma) are systematically observed as the most stable conformers, showing that in these two-residue peptide chains, the local conformational preference of each residue is retained (betaL for Phe and gamma turn for Xxx). Besides, beta turns are also spontaneously formed but appear as minor conformers. The theoretical analysis suggests negligible inter-residue interactions of the main conformers, which enables us to consider these species as good models of gamma turns. In the case of valine, two similar types of gamma turns, differing by the strength of their hydrogen bond, have been found both experimentally and theoretically. This observation provides evidence for a strong flexibility of the peptide chain, whose minimum-energy structures are controlled by side-chain/backbone interactions. The qualitative conformational difference between the present species and the reversed sequence Ac-Xxx-Phe-NH2 is also discussed.     

原子转移自由基聚合法用于以单分散树脂为基质的强阳离子交换色谱固定相的制备及其色谱性能研究

以7μm单分散交联聚甲基丙烯酸环氧丙酯树脂表面键合溴异丁酰溴为引发剂,以CuCl/CuCl2/2,2-联二吡啶(Bpy)为催化体系,采用封闭体系,在氮气保护下,以乙烯基苯磺酸钠(NaSS)为单体、N,N-二甲基甲酰胺(DMF)水溶液为溶剂,制备了强阳离子交换色谱(SCX)固定相,并用元素分析与红外光谱法对其进行了表征....     

Polypeptide subunits of dynein 1 from sea urchin sperm flagella.

A high-resolution sodium dodecyl sulfate polyacrylamide gel electrophoresis system has been used to show the presence, in both whole sperm and isolated flagellar axonemes, of eight polypeptides migrating in the 300,000--350,000 molecular weight range characteristic of the heavy chains of dynein ATPase. Previously, only five such chains have been discernible. Extraction of isolated axonemes for 10 min at 4 degrees C with a solution containing 0.6 M NaCl, ph 7, releases a mixture of particles that separate, in sucrose density gradient centrifugation, into a major peak, dynein 1 ATPase, sedimenting at 21S and a minor peak at 12--14S. The polypeptide compositions of these two peaks are different. The dynein 1 peak, which contains most of the protein on the gradient, contains approximately equal quantities of two closely migrating heavy chains, with a small amount of a third, more slowly migrating chain; no other heavy chains appear in this peak. Two groups of smaller polypeptides (three intermediate chains, within the apparent molecular weight range 76,000--122,000 and four newly discovered light chains, within the apparent molecular weight range 14,000--24,000) cosediment with the 21S peak. The heavy chain composition of the 12--14S peak is more complex, all eight heavy chains occurring approximately the same ratios as occur in intact axonemes.     

Crystal supramolecular motifs: columns of embracing Ph3PMe+ or Ph3PCI+ cations controlling formation of

The crystal structures of (Ph3PCl)2[Cu3Cl8] (1) (triclinic, space group P1, a = 9.480(6) A, b = 10.243(8) A, c = 11.232(6) A, alpha = 86.76(4) degrees, beta = 66.62(5) degrees, gamma = 83.92(4) degrees, Z = 1) and (Ph3PMe)2[Cu3Br8] (2) (triclinic, space group P1, a = 9.795(4) A, b = 10.472(4) A, c = 11.392(4) A, alpha = 86.67(3) degrees, beta = 66.67(3)degrees, gamma = 83.14(3) degrees, Z = 1), reported here, demonstrate a new supramolecular motif for cations of the type Ph3PY+ where Y is CH3 or Cl. The crystals contain columns of cations propagated by alternating 6-fold phenyl embraces (6PE) and pseudo-6PE: the pseudo-6PE described here contains four phenyl rings and two hetero groups (Cl or CH3), and is symbolized as 4P2Y. The zigzag sequence of cations engaged in ...6P...4P2Y...6P...4P2Y... is similar to the zigzag chain of infinite 6-fold phenyl embraces (ZZI6PE) frequently adopted by Ph4P+ cations in crystals. One-dimensionally nonmolecular anion chains with repeat unit [Cu3X8] run parallel to and between the columns of cations. The coordination geometry in the [Cu3X8(2-)]1 to infinity chain has not been observed in crystals with other cations, and it is postulated that the attractive interactions between cations in the pseudo-ZZI6PE crystal supramolecular motif control the geometry of the anions through the requirement for commensurability of cation columns and anion chains.     

A new fluoroaluminophosphate chain with an Al/P ratio of unity

A new compound, Al2P2O8F2.[(CH3)2CHNH2CH2CH2NH2CH(CH3)2] (denoted AlPO-CJ8), with a 1-dimensional fluoroaluminophosphate chain and an Al/P ratio of unity has been synthesized solvothermally by using isopropylamine as an organic additive. It is characterized by X-ray powder diffraction (XRD), inductively coupled plasma (ICP), ion selective electrodes (ISE), and TGA-DTA analyses and structurally determined by single-crystal X-ray diffraction analysis. AlPO-CJ8 crystallizes in the triclinic space group P1 with a = 5.0306(8) A, b = 9.3626(15) A, c = 10.6131(17) A, alpha = 65.949(4) degrees, beta = 88.218(4) degrees, gamma = 77.19 degrees, and Z = 2. Its structure is built up by alternation of tetrahedral PO3(=O) and AlO3F units to form infinite 1-D Al2P2O8F2(2-) macroanionic chains. The inorganic chains are held together by diprotonated N,N'-diisopropylethylenediamine through H-bonds. The organic species N,N'-diisopropylethylenediamine is believed to be formed through solvothermal reaction of the organic additive isopropylamine and the solvent ethylene glycol. The existence of terminal P=O and Al-F bond groups in the 1-D chain indicates that it has potential to further set up higher dimensional networks through condensations.     

Relationship between human IgG structure and retention time in hydroxyapatite chromatography with sodium chloride gradient elution

Accurate prediction of the elution tendency of monoclonal antibodies in column chromatography would be beneficial for the efficient setup of purification procedures. Hydroxyapatite chromatography experiments using 37 recombinant human monoclonal antibodies were performed by sodium chloride gradient elution with 5 mM sodium phosphate to correlate the retention times with antibody structures (subclass and light‐chain isotypes). The contribution of metal affinity interactions in the interaction of antibodies with hydroxyapatite was investigated by (i) eliminating 5 mM sodium phosphate in buffers, (ii) comparing sodium chloride versus sodium phosphate gradient elutions, and (iii) using IgG₄ antibodies with a leucine→glutamate mutation. By using antibodies of different subclasses but with identical Fab regions, the elution behavior in sodium chloride elution could be classified by subclass and type of light chain. It is considered that the retention of monoclonal antibodies to hydroxyapatite is affected by the cooperation of phosphoryl cation exchange and metal affinity interactions. The contribution of the metal affinity interactions is greater in the sodium chloride gradient elution method than in the sodium phosphate gradient elution method.     

Improved chemical composition separation of ethylene–propylene random copolymers by high-temperature solvent gradient interaction chromatography

High-temperature solvent gradient interaction chromatography (HT-SGIC) is a fast and efficient fractionation technique for the chemical composition analysis of olefin copolymers. The separation of ethylene–propylene random copolymers (EPRs) was achieved on a graphitic stationary phase, Hypercarb, at 160 °C by using linear solvent gradient elution from 1-decanol to 1,2,4-trichlorobenzene (TCB). In the present work, the solvent gradient profile was modified to improve the chromatographic separation of EPRs. With the aim to obtain a better resolution in separation, a slow increase in the volume fraction of TCB was applied. This allowed for a relatively large retention region for linear polyethylene (PE) chains on the column; thereby, a broader elution volume zone between the start of the gradient and the PE elution was achieved. The efficiency of this new gradient profile was demonstrated by analysing two fully amorphous EPR samples. Clear differences in the chemical composition of these EPR samples with similar ethylene contents have been proven by using this modified solvent gradient. The comprehensive chemical composition and microstructure analysis of the SGIC-separated fractions by FTIR revealed that ethylene/propylene (EP) copolymer chains were eluted according to their ethylene/propylene contents and E or P sequence lengths, even though they are distributed in a random manner. These results showed that the solvent composition is an important factor to affect the interactive adsorption or desorption behaviour of EP chains on Hypercarb. In this way, for the first time, the determination of the complex composition and chain structure of EPR samples was achieved within short analysis time, which is not possible till now using other fractionation techniques reported.

Random copolymerization of macromonomers as a versatile strategy to synthesize mixed-graft block copolymers

The random copolymerization of norbornene-functionalized macromonomers was explored as a method of synthesizing mixed-graft block copolymers (mGBCPs). The copolymerization kinetics of a model system of polystyrene (PS) and poly(lactic acid) (PLA) macromonomers was first analyzed, revealing a gradient composition of side chains along the mGBCP backbone. The phase separation behavior of mGBCPs with PS and PLA side chains of various backbone lengths and side chain molar ratios was investigated, and increasing the backbone length was found to stabilize the phase-separated nanostructures. The graft architecture was also demonstrated to improve the processability of the mGBCP, compared to a linear counterpart. Investigations of mGBCPs comprised of polydimethylsiloxane and poly(ethylene oxide) side chains exemplified the diverse self-assembled morphologies, including a Frank-Kasper A15 phase, that can be obtained with mGBCPs synthesized by random copolymerization of macromonomers. Lastly, a ternary mGBCP was synthesized by the copolymerization of three macromonomers.     

Hydrogen absorption in transition metal silicides: La3Pd5Si-hydrogen system

Pressure-composition isotherm measurements show that the ternary lanthanum palladium silicide phase La3Pd5Si absorbs reversibly up to 5 hydrogen atoms per formula unit at 550 K and 14 bar hydrogen pressure. In-situ synchrotron and neutron powder diffraction reveals three phases, an alpha-phase having the limiting composition La3Pd5SiD approximately 1.6 at low deuterium pressure (at up to 9.5 bar D2 and 550 K), a beta-phase La3Pd5SiD approximately 2.30-4 at intermediate deuterium pressure (<9.5 bar D2 and 550 K), and a relatively unstable gamma-phase La3Pd5SiD approximately 5 at high deuterium pressure (obtained at 75 bar D2 and 293 K). While the alpha and beta phases retain the symmetry of the H-free La3Pd5Si (space group Imma), the gamma-phase undergoes a symmetry lowering (a(gamma) approximately a(beta), b(gamma) approximately 3b(beta) and c(gamma) approximately c(beta), V(gamma) approximately 3V(beta), space group Pmnb). The structure of the alpha-phase contains isolated [Pd-D-Pd] fragments, which are joined into polymeric (-Pd-D-Pd-)n zig-zag chains in the beta-phase. In the gamma-phase some D sites depopulate, while new D sites are occupied, thus leading to a partial interruption of the zig-zag chains and the formation of isolated [D-Pd-D-Pd] and [D-Pd-D-Pd-D] fragments. This unexpected behavior can be attributed to the onset of repulsive Si-D and D-D interactions (Si-D > 3.0 A, D-D > 2.1 A) that divide the structure into Si-poor slabs that absorb hydrogen and Si-rich slabs that do not. The competition between silicon and deuterium which act as a transition metal ligand is further underlined by the fact that Pd atoms having one Si ligand are capable of forming Pd-D bonds, whereas Pd atoms having two Si ligands are not.     

α-Amylase Purification and Separation from Gluco-Amylase by Affinity Chromatography on Cross-Linked Amylose(CL-Amylose)

Abstract

Using a CL-amylose column it is possible to purify α-amylase from other protein contaminants (e.g. albumin, haemoglobin, etc.) and from interfering exoamylases, by its specific retention on CL-amylose. α-Amylase is eluted off the column in the second step by a mixture containing 0.1 M NaCl in acetic acid 0.01 M and CaCl₂ 0.015 M. The recoveries of glucoamylase and α-amylase were 74% and 65% respectively. The retention capacity of the stationary phase is 0.5 mg of α-amylase/ml bed volume.     

A rod-linker-contained R-phycoerythrin complex from the intact phycobilisome of the marine red alga Polysiphonia urceolata

A linker-contained R-phycoerythrin (R-PE) complex was obtained by the Sephadex G-150 column chromatography from the Polysiphonia urceolata phycobilisome (PBS) that was dis-associated at 37 degrees C for 6 h in the dilute phosphate buffer (pH 7.0) with 5% (m/v) sodium dodecyl sulfate (SDS). The R-PE complex showed three absorption peaks at 498, 538 and 567 nm, and a fluorescence emission maximum at 578 nm. Polypeptide analysis of the complex by the 8-25% (m/v) gradient SDS-polyacrylamide gel electrophoresis demonstrated that it contained three red subunits, alpha(PE)(17.6),beta(PE)(19.2) and gamma(PE)(31.0), and a colorless 35.3 kDa rod-linker L(R)(35.3). Polypeptide proportion of the complex demonstrated that it was a hexamer in aggregate form gamma(PE)(31.6), (alpha(PE)(17.6),beta(PE)(19.2))(3)L(R)(35.3)(alpha(PE)(17.6),beta(PE)(19.2)(3)gamma(PE)(31.6) which is proposed to originate from a rod assembly of hexamer-linker-hexamer the substructure alpha(PE)(17.6),beta(PE)(19.2)(3) of which was decomposed off from the ends of the assembly during the PBS dissociation. The distinctive stability of the prepared hexamer is attributed to a large extent to the electrostatic interaction among its polypeptides, but not to the hydrophobic interaction.