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1.
The B3LYP method of DFT and HF theories of ab initio with 6-311+G** basis sets were used to predict the geometries of the cytosine-BX3 (X,=F, Cl) complex systems. Four conformers were obtained with no imaginary frequencies, respectively. The binding energies, enthalpies and Gibbs energies of cytosine-BX3 have been obtained. The analyses of the combinations between cytosine and BX3 using the natural bond orbital (NBO) method and thermodynamics indicate that the complexes (a) and (e), which depend on the proton affinities of the oxygen on the cytosine and boron in BX3, are the most stable ones with their combination energies of −234.21 and −228.23 kJ.mol−1 (B3LYP method, BSSE corrected). Based on the calculation results, a reasonable method was employed to calculate the change in the enthalpies and Gibbs energies to form eight complexes in the gaseous state at 298.15K and 101.325 kPa. It can be shown that the conformers (a) and (e) are the most stable and form readily.  相似文献   

2.
Ionic mobility in the NaSbClF3 · H2O, KSbClF3, and NH4SbClF3 fluorochloride complexes was studied by 1H and 19F NMR spectroscopy in the temperature interval from 150 to 480 K. The types of ionic motions in the compounds were determined. Their physicochemical characteristics were compared with those of the earlier studied sodium, potassium, and ammonium tetrafluoroantimonates(iii). The replacement of one F atom by the Cl atom in MSbF4 (M = Na, K, NH4) changes both the structure of the Sb polyhedra forming the structure of the antimony(iii) fluorochloride complex and the character of ionic motions in the compounds. The ionic conductivity in the 324–436 K range was determined for NH4SbClF3: σ = 1.07 · 10−4 S cm−1 at T = 423 K. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 7, pp. 1353–1357, July, 2008.  相似文献   

3.
The equilibrium geometric parameters and the energetic and spectroscopic characteristics of low lying conformers for series of polyhydroxyl molecules and ions in which sodium atoms are successively substituted for the hydroxyl hydrogen atoms have been calculated by the density functional theory B3LYP method with the 6−31G* and 6−311+G** basis sets. The glucose derivatives [Glu − nH + nNa] and [Glu − nH + (n + 1)Na]+ (n = 1−5) and the 2,4,6-trihydroxyacetophenone derivatives [THAP − nH + nNa] and [THAP − nH + (n + 1)Na]+ (n = 1−4) have been considered. The affinities of the neutral [Glu − nH + nNa] and [THAP − nH + nNa] molecules for adding Na+ cations, as well as the energies of successive substitution of Na atoms for H atoms in the Glu and THAP molecules and the Glu+ and THAP+ ions in their reaction with sodium acetate molecules, have been estimated. Computations show that the first substitution of Na for H in ions is slightly exothermic and, presumably, can spontaneously occur under common conditions. Further substitutions are endothermic, but the required energy inputs are small. Therefore, successive substitutions for two, three, or more hydroxyl H atoms in the molecules and ions under consideration are possible at relatively low energy inputs. The computation results and conclusions are compared with the MALDI TOF mass spectral data for Na-substituted glucose and 2,4,6-trihydroxyacetophenone derivatives in the [glucose + CH3COONa + THAP] system where, in addition to common Glu · Na+ and THAP · Na+ ion-molecular complexes, multiply substituted positive ions of the [Glu − nH + (n + 1)Na]+ (n = 1−4) and [THAP − nH + (n + 1)Na]+ (n = 1−3) type have been identified.  相似文献   

4.
The electronic structures and dissociation energies of diazocyclopropane (1), diazomethane (2), 2-diazopropane (3), and diazocyclobutane (4) were calculated at the density functional B3LYP and the ab initio MP2 levels using the 6-31G(d) basis set and at the G2(MP2,SVP)//B3LYP/6-31G(d) level. Distinctive features of diazocyclopropane 1 are the low energy of dissociation with loss of the nitrogen molecule; ΔE = 18.7 kcal mol−1, B3LYP; 9.2 kcal mol−1, G2 at 0 K) and a nonplanar structure, in which the C=N bond forms an angle of 115.7° with the plane of the cyclopropane ring. The behavior of molecules 1 and 2 in the 1,3-dipolar cycloaddition to ethylene (5), acrylonitrile (6), and methyl acrylate (7) was studied. The reactions of 1 with 6 and 7 have very low activation barriers (ΔE a = 4.7 and 4.4 kcal mol−1, respectively; at the B3LYP level). For these reactions, the G2 method gives even smaller activation parameters (1.8 and 0.3 kcal mol−1, respectively). The results of our calculations provide a good explanation for high reactivity of diazocyclopropane 1. Dedicated to Academician N. K. Kochetkov on the occasion of his 90th birthday. __________ Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 5, pp. 1072–1076, May, 2005.  相似文献   

5.
The reaction of N-benzoylphosphoramidic dichloride with amines afforded some new N-benzoylphos-phoric triamides with formula C6H5C(O)NHP(O)(X)2, X=NH–CH(CH3)2 (1), NH–CH2–CH(CH3)2 (2), NH–CH2–CH(OCH3)2 (3), N(CH3)[CH2CH(OCH3)2] (4) and N(CH3)(C6H11) (5) that were characterized by 1H,13C,31P NMR, IR spectroscopy and elemental analysis. The structures have been determined for compounds 4 and 5 by X-ray crystallography. These compounds contain one amidic hydrogen atom and form centrosymmetric dimmers via intermolecular –P–OH–N–hydrogen bonds besides weak C–H⋯O hydrogen bonds that lead to three-dimensional polymeric clusters in the crystalline lattice.  相似文献   

6.
Sodium ruthenium(III,IV) oxide Na1−x Ru2O4 was synthesized by the solid state reaction of Na2CO3 and RuO2 in inert atmosphere and characterized by X-ray powder diffraction, electron diffraction, and high-resolution transmission electron microscopy. The compound crystallizes in the CaFe2O4-type structure (space group Pnma, Z = 4, a = 9.2641(7) Å, b = 2.8249(3) Å, c = 11.1496(7) Å). Double rutile-like chains of the RuO6 octahedra form a three-dimensional framework, whose tunnels contain sodium cations. The structure contains two crystallographically independent sites of ruthenium atoms randomly occupied by the RuIII and RuIV cations. The superstructure with the doubled b parameter found for one of the samples under study using electron diffraction is caused, probably, by ordering of the Ru cations in the rutile-like chains. The Na1− x Ru2O4 compound exhibits temperature-independent paramagnetism with χ0 = 1.9·10−4 cm3 (mole of Ru−1). Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 10, pp. 1655–1660, October, 2006.  相似文献   

7.
The sorption of anions H2PO4 , HPO4 2−, PO4 3−, [Fe(CN)6]3−, and [Fe(CN)6]4− from aqueous solutions on the surface of FeIII and ZrIV oxyhydroxide hydrogels freshly precipitated at pH 4–13 was studied. The region of sorbate concentrations was from 0.00025 to 0.06 mol L−1. The plots of the anion uptakes vs. their equilibrium concentrations are represented by isotherms of the first type, which are well described by the Langmuir equation if the quantity of the amount adsorbed is expressed as mol-site g−1. The maximum uptakes and constants of the Langmuir equation were calculated. The phosphate anions occupy the same number of sorption sites on the sorbents precipitated at different pH. The average specific content of sorption sites for the ferro- and zirconogels in the metastability period is independent of the pH of their precipitation, being 3.1·10−3 and 3.2·10−3 mol-site g−1, respectively. The [Fe(CN)6]3− and [Fe(CN)6]4− anions are sorbed only on the positively charged sites of the hydrogels and occupy not more than 2·10 mol-site g−1 in the studied interval of pH of precipitation. __________ Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 8, pp. 1736—1741, August, 2005.  相似文献   

8.
The formations of the phosphinidene derivative HPNaF and its insertion reactions with R–H (R=F, OH, NH2, CH3) have been systematically investigated employing the density functional theory (DFT), such as the B3LYP and MPW1PW91 methods. A comparison with the results of MP2 calculations shows that MPW1PW91 underestimates the barrier heights for the four reactions considered. Similarly, the same is also true for the B3LYP method depending on the selected reactions, but by much less than MPW1PW91, where the barrier heights of the four reactions are 25.2, 85.7, 119.0, and 142.4 kJ/mol at the B3LYP/6-311+G* level of theory, respectively. All the mechanisms of the four reactions are identical to each other, i.e., an intermediate has been located during the insertion reaction. Then, the intermediate could dissociate to substituted phosphinidane(H2RP) and NaF with a barrier corresponding to their respective dissociation energies. Correspondingly, the reaction energies for the four reactions are −92.2, −68.1, −57.2, and −44.3 kJ/mol at the B3LYP/6-311+G* level of theory, respectively, where both the B3LYP and MPW1PW91 methods underestimate the reaction energies compared with the MP2 results. The linear correlations between the calculated barrier heights and the reaction energies have also been observed. As a result, the relative reactivity among the four insertion reactions should be as follows: H–F > H–OH > H–NH2 > H–CH3.  相似文献   

9.
The formation and fragmentation energies of the proton and sodium cation complexes with monosubstituted methane, cyclohexane, and benzene derivatives in which carbon atoms are bonded to substituents (NH2, OH, F, Cl, Br, ONO2, NO2, COOH, CN, and Ph) were calculated by the B3LYP/6-31G(d) method. For [M + Na]+ complexes, the formation energies are much lower (and differ from one another to a much lesser extent), while the dissociation energies are much higher, than the corresponding energies of the [M + H]+ complexes. Na+ cation shows a lower selectivity toward localization at functional groups in molecules compared to H+. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 2, pp. 246–249, February, 2008.  相似文献   

10.
The composition of complexes formed upon the extraction of UVI and ThIV nitrates with O-n-nonyl(N,N-dibutylcarbamoylmethyl) methyl phosphinate (L) from solutions of nitric acid without additional solvent was determined by 31P NMR spectroscopy. The structures of the complexes formed were studied by IR spectroscopy. Uranium(VI) is extracted from 3 and 5 M solutions of HNO3 as the [UO2(L)2(NO3)2] complex, while thorium(IV) is extracted from 5 M HNO3 as the [Th(L)3(NO3)3]+·NO 3 complex. In both cases, ligand L has bidentate coordination. Ligand L contacts with 3 and 5 M nitric acid to form adducts L·HNO3 and L· (HNO3)2, respectively. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 11, pp. 2460–2464, November, 2005.  相似文献   

11.
Quantum-chemical calculations of the geometry and energies of nine possible isomers of 12-vertex cobaltacarborane CpCoC2B9H11 (1) were carried out by the DFT method (PBEPBE/DGDZVP/DGA1). Thermodynamic stability of the isomers increases with increasing distance between the carbon atoms in the cage and is virtually independent of the position of the CpCo vertex. The relative stabilities of the 1,2,3-(17.57 kcal mol−1), 1,2,4-(3.72 kcal mol−1), and 1,2,9-isomers of 1 (0 kcal mol−1) are similar to the corresponding values for the ortho (17.61 kcal mol−1), meta (3.21 kcal mol−1), and para isomers (0 kcal mol−1) of carborane C2B10H12. The results of the present study confirm a close similarity of the CpCo and BH fragments in metallacarborane chemistry. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 7, pp. 1557–1559, July, 2005.  相似文献   

12.
Based on the continuum dielectric model, this work has established the relationship between the solvent reorganization energy of electron transfer (ET) and the equilibrium solvation free energy. The dipole-reaction field interaction model has been proposed to describe the electrostatic solute-solvent interaction. The self-consistent reaction field (SCRF) approach has been applied to the calculation of the solvent reorganization energy in self-exchange reactions. A series of redox couples, O2/O 2, NO/NO+, O3/O 3, N3/N 3, NO2/NO+ 2, CO2/CO 2, SO2/SO 2, and ClO2/ClO 2, as well as (CH2)2C-(-CH2-) n -C(CH2)2 (n=1 ∼ 3) model systems have been investigated using ab initio calculation. For these ET systems, solvent reorganization energies have been estimated. Comparisons between our single-sphere approximation and the Marcus two-sphere model have also been made. For the inner reorganization energies of inorganic redox couples, errors are found not larger than 15% when comparing our SCRF results with those obtained from the experimental estimation. While for the (CH2)2C–(–CH2–) n –C(CH2)2 (n=1 ∼ 3) systems, the results reveal that the solvent reorganization energy strongly depends on the bridge length due to the variation of the dipole moment of the ionic solute, and that solvent reorganization energies for different systems lead to slightly different two-sphere radii. Received: 19 April 2000 / Accepted: 6 July 2000 / Published online: 27 September 2000  相似文献   

13.
The mutual influence of the atoms on the composition of solid fluorine-containing antimony(iii) complexes formed in aqueous solutions in the (MF) x −(M′F) n−x −SbF3 (M, M′=Na, K, Rb, Cs, and NH4;n=1, 2;x=0 to 2), (KNO2) n −(KY) n −SbF3 (Y=F, Cl, SO4;n=0.5, 1), and K2SbF5−K2SbCl5 systems was investigated by elemental, X-ray, and thermogravimetric analyses and by IR and121,123Sb NQR spectroscopy. The isomorphism conditions for fluorine-containing antimony(iii) compounds resulting in the formation of complexes NaM′SbF5·1.5H2O (M′=K and Rb), K2SbF5·1.5H2O, NaCs3Sb4F16·H2O, KsbF3Cl, K2SbF2Cl3 with constant compositions, continuous M x M′2−x SbF5 (0<x<2) and limited M x M′1−x SbF4 (0.25<x<0.75; M, M′=K, Rb, Cs, and NH4) solid solutions or LiF+MSbF4 (M=Na, K, Rb, and Cs), M2SbF5+Cs2SbF5 (M=Na and K) and MSbF4+NaSbF4 (M=Rb and NH4) mechanical mixtures were determined. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 1, pp. 103–108, January, 1999.  相似文献   

14.
The Becke3LYP density functional was used to study structural and thermodynamic parameters of bivalent zinc cation complexes with selected substrates and ACE inhibitors (H2O/OH, neutral forms of captopril, zofenoprilat, omapatrilat, CH3CONHCH3, and N-terminal anions of captopril, zofenoprilat, omapatrilat, enalaprilat, perindoprilat, trandolaprilat, and fosinoprilat). The combination of DFT and the conductor-like polarizable continuum model (CPCM) were employed to compute the Gibbs interaction energies (ΔG) between Zn2+ and the selected ACE inhibitors for dielectric media with ɛ = 5 (to simulate the protein environment) and for water media (ɛ = 78.39) for comparison purposes. The results show that ΔG is sensitive to the dielectric constant of the environment and that lower dielectric medium favors the binding of inhibitors to the zinc cation.  相似文献   

15.
The substituent effects on the geometrical parameters and the individual hydrogen bond (HB) energies of base pairs such as X–adenine–thymine (X–AT), X–thymine–adenine (X–TA), X–guanine–cytosine (X–GC), and X–cytosine–guanine (X–CG) have been studied by the quantum mechanical calculations at the B3LYP and MP2 levels with the 6–311++G(d,p) basis set. The electron withdrawing (EW) substituents (F and NO2) increase the total binding energy (ΔE) of X–GC derivatives and the electron donating (ED) substituent (CH3) decreases it when they are introduced in the 8 and 9 positions of G. The effects of substituents are reversed when they are located in the 1, 5, and 6 positions of C, with exception of CH3 in the 1 position and F in the 5 position, which in both cases the ΔE value decreases negligibly small. With minor exceptions (X=8–CH3, 8–F, and 9–NO2), both ED and EW substituents increase slightly the ΔE values of X–AT derivatives. The individual HB energies (∆E HBs) have been estimated using electron densities that calculated at the hydrogen bond critical points (HBCPs) by the atoms in molecules (AIM) method. Most of changes of individual HBs are in consistent with the ED/EW nature of substituents and the role of atoms entered H-bonding. The remarkable change is observed for NO2 substituted derivative in each case.  相似文献   

16.
The structure of aqua complexes of alkali metal ions Me+(H2O) n , n = 1−6, where Me is Li, Na, K, Rb, and Cs, and complexes of 2,6-dimethylphenolate anion (CH3)2PhO selected as a model of the elementary unit of phenol-formaldehyde ion exchanger with hydrated alkali metal cations Me+(H2O) n , n = 0−5, was studied by the density functional method. The energies of successive hydration of the cations and the energies of binding of alkali metal hydrated cations with (CH3)2PhO depending on the number of water molecules n were calculated. It was shown that the dimethylphenolate ion did not have specific selectivity with respect to cesium and rubidium ions. The energies of hydration and the energies of binding of alkali metal cations with (CH3)2PhO decreased in the series Li+ > Na+ > K+ > Rb+ > Cs+ as n increased. The conclusion was drawn that the reason for selectivity of phenol-formaldehyde and other phenol compounds with respect to cesium and rubidium ions was the predomination of the ion dehydration stage in the transfer from an aqueous solution to the phenol phase compared with the stage of binding with ion exchange groups.  相似文献   

17.
The known organotin(IV) complexes with 2-mercaptopyrimidine (L) [Me2SnL2] (1), [Bun 2SnL2] (2), [Ph2SnL2] (3), and [Ph3SnL] (4) were synthesized using a new approach. The effect of the synthesized compounds on peroxidation of fatty acids (oleic and linoleic) was studied. Complexes 1–4 promote the peroxidation of oleic acid. Their effect on the enzymatic peroxidation of linoleic acid with lipoxygenase was compared with that of cisplatin and in vitro cytoxicity against sarcoma cancer cells was determined. The antiproliferative effect of complexes 2–4 was demonstrated. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 4, pp. 737–743, April, 2007.  相似文献   

18.
Nonempirical methods are used to calculate the geometric parameters, the frequencies of normal vibrations, and thermochemical characteristics of ions existing in saturated vapors over sodium bromide and iodide: Na2X+, NaX2, Na3X2+, and Na2X3 (X = Br, I). According to the calculations, Na2X+ and NaX2 triatomic ions have a linear equilibrium configuration of D h symmetry. Pentaatomic ions can exist in the form of three isomers: linear with D h symmetry, planar cyclic with C 2v symmetry, and bipyramidal with D 3h symmetry. At a temperature of ∼1000 K, Na3X2+ and NaX3 pentaatomic ions are shown to be present in vapor mainly in the form of linear isomers. The energies and enthalpies of ion molecular reactions with the participation of the above ions are calculated, and the formation enthalpies of the ions are determined, Δ f H o(0 K): 293±2 kJ/mol (Na2Br+), 354±2 kJ/mol (Na2I+), −536±2 kJ/mol (NaBr2, −458±2 kJ/mol (NaI2, 24±5 kJ/mol (Na3Br2+, 143±5 kJ/mol (Na3I2+, −810±5 kJ/mol (Na2Br3, and −675±5 kJ/mol (Na2I3.  相似文献   

19.
The effect of the nature of substituents at sp2-hybridized silicon atom in the R2Si=CH2 (R = SiH3, H, Me, OH, Cl, F) molecules on the structure and energy characteristics of complexes of these molecules with ammonia, trimethylamine, and tetrahydrofuran was studied by the ab initio (MP4/6-311G(d)//MP2/6-31G(d)+ZPE) method. As the electronegativity, χ, of the substituent R increases, the coordination bond energies, D(Si← N(O)), increase from 4.7 to 25.9 kcal mol−1 for the complexes of R2Si=CH2 with NH3, from 10.6 to 37.1 kcal mol−1 for the complexes with Me3N, and from 5.0 to 22.2 kcal mol−1 for the complexes with THF. The n-donor ability changes as follows: THF ≤ NH3 < Me3N. The calculated barrier to hindered internal rotation about the silicon—carbon double bond was used as a measure of the Si=C π-bond energy. As χ increases, the rotational barriers decrease from 18.9 to 5.2 kcal mol−1 for the complexes with NH3 and from 16.9 to 5.7 kcal mol−1 for the complexes with Me3N. The lowering of rotational barriers occurs in parallel to the decrease in D π(Si=C) we have established earlier for free silenes. On the average, the D π(Si=C) energy decreases by ∼25 kcal mol−1 for NH3· R2Si=CH2 and Me3N·R2Si=CH2. The D(Si←N) values for the R2Si=CH2· 2Me3N complexes are 11.4 (R = H) and 24.3 kcal mol−1 (R = F). sp2-Hybridized silicon atom can form transannular coordination bonds in 1,1-bis[N-(dimethylamino)acetimidato]silene (6). The open form (I) of molecule 6 is 35.1 and 43.5 kcal mol−1 less stable than the cyclic (II, one transannular Si←N bond) and bicyclic (III, two transannular Si←N bonds) forms of this molecule, respectively. The D(Si←N) energy for structure III was estimated at 21.8 kcal mol−1. Dedicated to Academician N. S. Zefirov on the occasion of his 70th birthday. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 9, pp. 1952–1961, September, 2005.  相似文献   

20.
The geometrical parameters, normal vibration frequencies, and thermochemical characteristics of the Na2Cl+, NaCl 2 , Na3Cl 2 + , and Na2Cl 3 ions in saturated vapors over sodium chloride were calculated by the ab initio methods including electron correlation. According to calculations, the Na2Cl+ and NaCl 2 triatomic ions have a linear equilibrium D h configuration. The pentaatomic ions can exist in the form of the D h linear isomer, C 2v planar cyclic isomer, or D 3h bipyramidal isomer. At ∼1000 K the Na3Cl 2 + and Na2Cl 3 ions exist predominantly in the form of the linear isomers. The energies and enthalpies of the ion-molecule reactions involving the above ions were calculated. The formation enthalpy of the ions Δf H 0(0 K) was determined: 230 ± 2 kJ/mol (Na2Cl+), −96 ± 4 kJ/mol (Na2Cl 3 ), −616 ± 2 kJ/mol (NaCl 2 ), and −935 ± 4 kJ/mol (Na2Cl 3 ). Original Russian Text Copyright ? 2007 by T. P. Pogrebnaya, A. M. Pogrebnoi, and L. S. Kudin __________ Translated from Zhurnal Strukturnoi Khimii, Vol. 48, No. 6, pp. 1053–1061, November–December, 2007.  相似文献   

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