Characterization of free radicals from vitamin K1 and menadione by 2 mm-band EPR,ENDOR and ESEEM

The anion and cation radicals of vitamin K₁ and its analog menadione were characterized using the magnetic resonance techniques of Electron Nuclear Double Resonance (ENDOR), Electron Spin Echo Envelope Modulation (ESEEM), and Electron Paramagnetic Resonance (EPR) at X-band and 2 mm-band. Theg-factor anisotropy of the radicals at 2 mm-band allow them to be distinguished from each other in the solid state. Theg-factor matrix of the radical anion of vitamin K₁ is virtually identical with that reported for the reduced A₁ acceptor in green plant photosystem I thus demonstrating that reduced A₁ is the anion radical of vitamin K₁.     

The FT-EPR spectra of the anthraquinone-2,6-disulfonic acid radicals as probe for local proton concentrations in electron transfer reactions

The radical anion of anthraquinone-2,6-disulfonic acid (2,6-AQDS) and different donor radical cations are formed by electron transfer from various pyrimidines to the laser-induced triplet state of 2,6-AQDS. The electron paramagnetic resonance (EPR) spectrum of the radical anion changes drastically with pH due to different protonated forms of this radical. These EPR spectra were used to define an effective pH value as a measure of the local proton (H₃O⁺) concentration in the surroundings of the 2,6-AQDS radical anion in a unbuffered solution. In some cases this effective pH value was found to be time-dependent reflecting the evolution of the protonation and deprotonation processes of acceptor and donor.     

EPR study of radiation damage in gamma-irradiated 3-nitroacetophenone single crystal

This paper presents the results of the electron paramagnetic resonance (EPR) study of the anion radical formed from 3-nitroacetophenone (C₈H₇NO₃) (3NAP) single crystal, by gamma irradiation. The EPR spectra of gamma-irradiated single crystals of 3NAP have been recorded at 10-degree intervals for different orientations of crystals in a magnetic field, at room temperature. The EPR analysis of gamma-irradiated crystals of 3NAP has shown that the radiation damage center produced by gamma irradiation is the carbon-centered 3NAP anion radical. One-electron reduction of 3NAP results in general bond loosening. The single crystals have been investigated between 120 and 450?K. The spectra have been found to be temperature-dependent. The EPR parameters of the 3NAP anion radical have been evaluated.     

The equilibrium and kinetics of intermolecular hydrogen bonding in nitroarene anion radical–alcohol system: 1,3‐dinitro‐benzene anion radical – R–OH (R═CH3–, C2H5–, (CH3)2 CH–)

To explore the possibility of hydrogen bonding of a stable anion radical with DNA – component sugar, hormones, steroid, and so on (through hydroxyl group), as a first step, the possibility of hydrogen bonding of 1,3‐dinitrobenzene anion radical (1,3‐DNB^??) with aliphatic alcohols was studied. It was found that 1,3‐DNB^?? anion radical undergoes hydrogen bonding with alcohols: methanol, ethanol, and 2‐proponal. The hydrogen‐bonding equilibrium constant K_eq and the (hydrogen‐bonding) rate constants k₂ were evaluated through the use of linear scan and cyclic voltammetry theory and techniques. The K_eq was found to be in the range of 1.4–6.0 m ^?1, whereas the rate constants k₂ were found to be in the range of 1.5–3.6 m ^?1 s^?1, depending upon the hydrogen‐bonding agent and the equation used for the calculation of the rate constants. The hydrogen‐bonding number n was found to be around 0.5 or 1.0. The implication of this study in, for example, the replication of DNA, the prevention of the formation of super oxide, and so on is discussed. Copyright © 2012 John Wiley & Sons, Ltd.     

ESR study on the structure of the ethylene radical cation stabilized in frozen SF6 and some fluoroalkanes: An evidence for a twisted structure

ESR spectra of the ethylene radical cation were detected at cryogenic temperatures in SF₆, C₂F₆ and C₃F₈. From the unusually small hyperfine couplings estimated for¹H and¹³C, it has been shown that the ethylene radical cation has a non-planar structure with a torsional angle in the range of 8°–23°. Upon annealing the sample at a temperature above 93 K, the ethylene radical cation in SF₆ changed into a monofluoroethyl radical through charge recombination with fluoride anion or SF ₆ ^? .     

Electron spin resonance investigation of carbon-13 hyperfine interactions in nitrobenzene anion radical

Synthesis of carbon-13 enriched nitrobenzene which contains 22·5 mole per cent of nitrobenzene-1-¹³C and an equal amount of nitrobenzene-4-¹³C has been accomplished. We report the carbon-13 hyperfine interactions in the corresponding anion radicals in a variety of solvent media. In hexamethylphosphoramide a _C1 = -7·05 gauss and a _C4 = 6·14 gauss. These couplings change to -9·03 gauss and 5·31 gauss, respectively, when the solvent medium is dimethylformamide containing 0·598 mole fraction of water. The solvent dependence of a _C1 is consistent with the radical remaining planar as opposed to adopting a pyramidal conformation at the nitrogen when hydrogen bonds form between the radical anion and protic solvents. Data reported here provide an experimental means to estimate the spin density distribution in nitrobenzene anion.     

Study of the effects of hydroxyapatite nanocrystal codoping by pulsed electron paramagnetic resonance methods

The effect of codoping of hydroxyapatite (HAP) nanocrystals with average sizes of 35 ± 15 nm during “wet” synthesis by CO₃^2? carbonate anions and Mn²⁺ cations on relaxation characteristics (for the times of electron spin–spin relaxation) of the NO₃^2? nitrate radical anion has been studied. By the example of HAP, it has been demonstrated that the electron paramagnetic resonance (EPR) is an efficient method for studying anion–cation (co)doping of nanoscale particles. It has been shown experimentally and by quantummechanical calculations that simultaneous introduction of several ions can be energetically more favorable than their separate inclusion. Possible codoping models have been proposed, and their energy parameters have been calculated.     

Transient and pulsed EPR study of17O-substituted methyl-naphthoquinone as radical anion in the A1 binding site of photosystem I and in frozen solution

Quinones have been studied in considerable detail as functional cofactors in membrane-bound protein-cofactor systems, in particular in reaction centers (RCs) of photosynthesis. For both types of RCs, they act primarily as one-electron gates during light-induced charge separation but at very different redox potential. Hydrogen bonding between the RC protein and the two, 1,4-quinone carbonyl groups constitutes a major protein-cofactor interaction in control of function. In contrast to symmetric H-bonding for quinones in isotropic solution, asymmetric H-bonding is a characteristic feature of the quinone binding sites in RC proteins. A simple valence bond model correlates the asymmetry of respective H-bond strength with the asymmetric spin density distribution derived from observable hyperfine couplings of the quinone anion state. Among all quinone-protein systems studied so far, the A₁ acceptor site in photosystem (PS) I exhibits the highest asymmetry. Since the carbonyl groups carry most of the total unpaired electron spin density, isotopic labelling of the carbon (¹³C) and oxygen (¹⁷O) appears to be the proper way to characterize the H-bond asymmetry by hyperfine couplings. Indeed, recent¹³C hyperfine studies, together with data for protons in specific ring substituents, confirm the high asymmetry correlated with only one dominant H-bond in the A₁ site of PS I, which is consistent with the structure model derived from X-ray structure (1JB0) for the ground state of the PS I protein complex.¹⁷O hyperfine tensors measured for the A₁ site of PS I yield high hyperfine coupling constants but very small asymmetry for the two carbonyl groups. The asymmetry is even three times smaller than the already small one observed for the Q_A site of purple bacterial RCs. A small asymmetry is however consistent with previous studies on model systems which showed an insensitivity of the¹⁷O hyperfine coupling to H-bond-induced changes of the unpaired electron spin density. The large¹⁷O hyperfine coupling itself appears to depend on the electrostatics seen by the radical anion. It is slightly larger when A ₁ ^? is part of the functional transient radical ion pair state as compared with the photoaccumulated stable radical anion. Possible explanations and consequences of these results are discussed.     

Spectroscopic Study of 2-(2-pyridyliminomethyl)phenol as a Novel Fluorescent Probe for Superoxide Anion Radicals and Superoxide Dismutase Activity

A novel spectrofluorometric method, using 2-(2-pyridyliminomethyl)phenol as a fluorescent probe, was developed for the determination of superoxide anion radical (O₂ ^•−) and superoxide dismutase activity (SOD). The new fluorescent probe was synthesized and characterized with elemental analysis and IR spectra. It was oxidized by O₂ ^•− to form a less fluorescence product. Based on this reaction, a spectrofluorometric method was proposed and successfully used to determine superoxide anion radicals and SOD activity. The effects of interferences were studied. The reaction was simple, precise and sensitive. It was applied to determine SOD activity in garlic, papaya and spinach successfully.     

Quantum - Chemical Study of the Relation Between Electronic Structure and IR Spectra of Neutral Molecules,Anion - Radicals,and Dianions of Aromatic Nitriles

The relation between the IR data and the quantum-chemical indices. calculated by the CNDO/2 method has been studied. The linear relationship between the experimentally measured °C≡N and the corresponding Wiberg bond index (W_C≡N) has been found for the series of conjugated nitriles including neutral molecules. anion - radicals and dianions.

The changes in the intensity of the stretching C≡N vibration on transition from a neutral molecule into anion - radical and dianion have been investigated by the CNDO/2 method. The calculated values for δμ/δQ_CN show that in the order: neutral molecule, anion - radical and dianion the IR intensity of the stretching C≡N vibration significantly increases.     

The universality of the electron spin relaxation in C60 mono radical anion salts: EPR studies of the model system [P(C6H5)4]2C60X

The C₆₀ radical anion salts [P(C₆H₅)₄]₂C₆₀X (X=Cl, Br, I) are grown via electrocrystallization and used as a model system to study the electron spin and nuclear spin dynamics as well as the molecular dynamics of C₆₀ mono anions in the solid state, which obey universal laws. It is shown that [P(C₆H₅)₄]₂C₆₀X is an exception among the fullerides, since the temperature dependence of the JT distortion, predicted for ionic C₆₀, can be deduced.     

Radical chemistry of glucosamine naphthalene acetic acid and naphthalene acetic acid: a pulse radiolysis study

Free radical‐induced oxidation reactions of glucosamine naphthalene acetic acid (GNaa) and naphthalene acetic acid (Naa) have been studied using pulse radiolysis. GNaa was synthesized by covalently attaching Naa on glucosamine. Hydroxyl adduct (from the reaction of hydroxyl radicals (^●OH) at the naphthalene ring) was identified as the major transient intermediate (suggesting that the ^●OH reaction is on the naphthalene ring) and is characterized by its absorption maxima of 340 and 400 nm. Both GNaa and Naa undergo similar reaction pattern. The bimolecular rate constants determined for the reactions are 4.8 × 10⁹ and 8.9 × 10⁹ dm³ mol^?1 s^?1 for GNaa and Naa respectively. The mechanism of reaction of ^●OH with GNaa was further confirmed using steady‐state method. Radical cation of GNaa was detected as an intermediate during the reaction of sulfate radical (SO₄^●?) with GNaa (k₂ = 4.52 × 10⁹ dm³ mol^?1 s^?1). This radical cation transforms to a ^●OH adduct at higher pH. The radical cation of GNaa is comparatively long lived, and a cyclic transition state by neighboring group participation accounts for its stability. The oxy radical anion (O^●?) reacts with GNaa (k₂ = 1.12 × 10⁹ dm³ mol^?1 s^?1) mainly by one‐electron transfer mechanism. The reduction potential values of Naa and GNaa were determined using cyclic voltammetric technique, and these are 1.39 V versus NHE for Naa and 1.60 V versus NHE for GNaa. Copyright © 2014 John Wiley & Sons, Ltd.     

Evidence for a possible role of 3‐hydroxyanthranilic acid as an antioxidant

The reactions of 3‐hydroxyanthranilic acid (3‐OHAA) with N₃^?, NO₂^?, NO^?, CCl₃O₂^? , and OH^? radicals were examined using a pulse radiolysis technique mainly at pH 7. The bimolecular electron transfer from secondary one‐electron oxidants results in the formation of anilino radical (λ_max ? 380 nm). The rate constant for the reaction of N₃^? radical with 3‐OHAA at pH 7 was found to be 6.3 × 10⁹ dm³ mol^?1 s^?1. It was observed that the 3‐OHAA reacts with oxygen centered radicals. The repair rate constant for the electron transfer reaction from 3‐OHAA to guanosine radical and chlorpromazine cation radical was also examined using a pulse radiolysis technique. Kinetic studies indicate that 3‐OHAA may act as an antioxidant to repair free‐radical damage to above mentioned biologically important compounds. The rate constants of electron transfer from the 3‐OHAA to the guanosine and chlorpromazine radicals were determined. The one‐electron reduction potential for 3‐OHAA radical was found to be 0.53 ± 0.06 V versus NHE. Copyright © 2008 John Wiley & Sons, Ltd.     

On Electron Spin Polarization Created in the Excited Triplet State of Accessory Chlorophyll via Photoinduced Charge-Recombination of the Photosystem II Reaction Center

We present a theoretical approach to investigate the electron spin polarization (ESP) of the excited triplet state that has been detected using the time-resolved electron paramagnetic resonance (TREPR) method in the photosystem II center of the plants. We show, using the stochastic Liouville equation, that the ESP pattern created in the accessory chlorophyll (Chl_accD1) which reside near the P_D1 chlorophyll of the active branch is explained by one-step, concerted double electron transfer model, initiating from the singlet–triplet conversion of the light-induced charge-separated state composed of P_D1 radical cation and pheophytin radical anion. We also considered the sequential ESP transfer model via the triplet charge-recombination (CR) and the triplet–triplet energy transfer processes. It has been clearly shown that the ESP created in the ³Chl_accD1* is dependent on the rate constant (k _TT) of the triplet–triplet energy transfer from the intermediate triplet state created by the CR. Also we show that the relative orientation of the principal axes of the spin dipolar interaction in the intermediate triplet state (³P_D1*, as an example) may play a role in the ESP pattern, when the k _TT is smaller than the angular frequency of the Zeeman energy. We have theoretically shown that the TREPR measurement of the ESP is very powerful to investigate the primary chemical process and to characterize the intermediate as a signature of the stepwise ESP transfer.     

Can tetra‐tert‐butylethylene be formed by ion–ion recombination or ion–molecule reaction of two di‐tert‐butylcarbene units?—a DFT study

The reaction channels of di‐tert‐butylcarbene ( 2 ), its radical anion, ( 3 ) and its radical cation ( 4 ) were investigated theoretically by using DFT/B3LYP with 6‐31+G(d) basis set and 6‐311+G(2d,p) for single point energy calculations. Conversion of the neutral carbene 2 to the charged species 3 and 4 results in significant geometric changes. In cation 4 two different types of C? (CH₃)₃ bonds are observed: one elongated sigma bond called “axial” with 1.61 Å and two normal sigma bonds with a bond length of 1.55 Å. Species 2 and 4 have an electron deficient carbon center; therefore, migration of CH₃ and H is observed from adjacent tert‐butyl groups with low activation energies in the range of 6–9 kcal/mol like similar Wagner–Meerwein rearrangements in the neopentyl‐cation system. Neutral carbene 2 shows C? H insertion to give a cyclopropane derivative with an activation energy of 6.1 kcal/mol in agreement with former calculations. Contrary to species 2 and 4 , the radical anion 3 has an electron rich carbon center which results in much higher calculated activation energies of 26.3 and 42.1 kcal/mol for H and CH₃ migrations, respectively. NBO charge distribution indicates that the hydrogen migrates as a proton. The central issue of this work is the question: how can tetra‐tert‐butylethylene ( 1 ) be prepared from reaction of either species 2 , 3 , or 4 as precursors? The ion–ion reaction between 3 and 4 to give alkene 1 with a calculated reaction enthalpy of 203.5 kcal/mol is extremely exothermic. This high energy decomposes alkene 1 after its formation into two molecules of carbene 2 spontaneously. Ion–molecule reaction of radical anion 3 with the neutral carbene 2 is a much better choice: via a proper oriented charge–transfer complex the radical anion of tetra‐tert‐butylethylene (11) is formed. The electron affinity of 1 was calculated to be negligible. Copyright © 2010 John Wiley & Sons, Ltd.     

Dynamic polarization of 7Li nuclei in solutions containing radical ions

Dynamic nuclear polarization parameters, obtained at 75 G, are reported for ⁷Li ions in collision with several radical anions and with one radical cation. All systems show large negative ⁷Li N.M.R. enhancements indicative of weak scalar relaxation. However, radical induced relaxation rates derived from ⁷Li T ₁ measurements suggest stronger complexing of lithium ions with radical anions than with the radical cation as would be expected from simple coulombic considerations. Translational modulation of the dipolar interaction best accounts for proton and radical cation dipolar relaxation rates while rotational modulation best accounts for the corresponding radical anion rates; this supports the interpretation above. A model for the lithium radical collision is proposed which implies that, for radical anions, scalar coupling is only apparently weak and that the low ⁷Li scalar relaxation rates observed result from scalar correlation times (τ_c = 10^-8-10^-9 s) longer than any yet observed by this technique. The model predicts that, for certain ranges of τ_c, increasing strength of complex formation should lead to smaller scalar relaxation rates and more negative enhancements, in contrast with the behaviour of fluorocarbons where the reverse was true. The predicted dependence of enhancement upon τ_c also suggests that ⁷Li enhancements should be extremely sensitive to variations in the chemical properties of the system.     

Mechanisms of the Reactions of Radicals with Ozone

The available experimental data (rate constants and activation energies) for the reactions of the hydrogen atom and the R^?, RO^?, RO ₂ ^? , HO^?, and HO ₂ ^? radicals with ozone are analyzed using the method of intersecting parabolas (potential curves). The conclusion is drawn that the primary event in the reactions of H^?, R^?, HO^?, and RO^? with ozone is the addition of the radical to the ozone molecule with the subsequent fast decomposition of the labile polyoxide radical formed. The classical potential barrier for this addition reaction is close to that for the addition of radicals to molecules with multiple bonds. Peroxy radicals react with ozone by the associative decomposition mechanism, RO ₂ ^? + O₃ → RO^? + 2O₂. The ozone molecule reacts with the HO ₂ ^? radical by abstracting its hydrogen atom, O₃ + HO ₂ ^? → HO ₃ ^? + O₂. The experimental data were used to determine the parameters required to calculate the activation energies for the reactions under study.     

Antioxidant Activities of Some New Chromonyl-2,4-Thiazolidinediones and Chromonyl-2,4-Imidazolidinediones Having Chromone Cores

The antioxidant properties of 11 new synthesized chromonyl-2,4-thiazolidinediones and chromonyl-2,4-imidazolidinediones (CBs) were investigated. The antioxidant activities and mechanisms of the CBs interaction with reactive oxygen species (ROS) were clarified using various in vitro antioxidant assay methods including superoxide anion radical ( $ \mathrm{O}\overline{{}_2^{\bullet }} $ ), hydroxyl radical (HO^?), 1,1-diphenyl-2-picryl-hydrazyl free radical (DPPH^?) scavenging activity and the iron (II)-ferrozine complex formation. The potassium superoxide/18-crown-6 ether dissolved in dimethylsulfoxide (DMSO) was applied as a source of superoxide anion radical. Hydroxyl radicals were produced in the Fenton-like reaction Fe(II)+H₂O₂. Chemiluminescence, spectrophotometry, and electron paramagnetic resonance (EPR) spectroscopy using 5,5-dimethyl-1-pyrroline-1-oxide (DMPO) as spin trap were applied as the measurement techniques. The CBs examined that exhibited good free radical scavenging activity also showed strong total antioxidant power capacity. Possible mechanisms of antioxidation are proposed to explain the differences in the experimental results between the chromone derivatives with imidazolidine-2,4-dione ring and those with thiazolidine-2,4-dione ring. In conclusion, some of the new CBs are promising to be applied as inhibitors of free radicals.     

Reactivity of 2‐aryl‐1,3‐dithiane anions towards neopentyl,neophyl and phenyl iodides. New evidence for an SRN1 mechanism

The reactions of 2‐(4‐Z‐phenyl)‐1,3‐dithiane anions (Z = H, OMe, Cl, CN) with neopentyl, neophyl and phenyl iodides were studied in DMSO, taking into consideration the effect of the Z substituent on the dithiane anions reactivity as well as on the product distribution. These substitution reactions proceed by an S_RN1 mechanism with radicals and radical anions as intermediates. Two competitive pathways are possible for the radical anion of the substitution product, namely electron transfer (ET) to the substrate giving the substitution product and C–S bond fragmentation to yield a distonic radical anion. ET is the main pathway for the reactions between dithiane anions bearing electron‐donor substituents and neopentyl or its analogue iodides affording the substitution products in moderate yields (41–53%). Copyright © 2011 John Wiley & Sons, Ltd.