Mass spectrometric analysis of hydroxyproline glycans

Mass spectrometric techniques are presented which allow one to analyze the sugar part bound to hydroxyproline in hydroxyproline-rich glycoproteins. The hydroxyproline (Hyp) glycans obtained by alkaline hydrolysis give abundant [M + Na](+) ions by electrospray ionization which after collision-induced dissociation (CID) yield inter alia [Hyp - H + Na](+). In mixtures a parent ion scan of this species will indicate the various molecular species which can then be analyzed by MS(n) after CID in an ion trap, where successive losses of the sugar units are observed. Methylation techniques allow one to distinguish between linear and branched isomeric structures.     

Mass spectrometric analysis of halogenated polymers

Controlled pyrolysis—electron impact mass spectrometry is a general method for the identification of polymers. It is shown here to be useful for the diagnosis of commercial halogen-containing polymers. The application of the technique both in a purely fingerprinting role, and by rationalising spectra in terms of structure and generalised thermal degradation pathways, is demonstrated. Inorganic oxides can have a secondary effect on degradative behaviour and spectral form.     

Mass spectrometric analysis of protein phosphorylation

Phosphorylation is one of the most common posttranslational modifications of proteins in eukaryotic cells; it plays an important role in a wide spectrum of biological processes. This makes its study an important task for understanding cell functioning mechanisms. The aim of phosphoproteomics is a global mass spectral analysis of the phosphoprotein composition of cells, i.e., phosphoproteome. Nowadays, new effective methods are actively developed, which succeed not only in the detection of phosphorylated proteins but also in the determination of phosphorylated amino acid residues (phosphorylation sites) and in the quantitative comparison of phosphorylation among several specimens. Despite the analysis of protein phosphorylation remains a complicated problem, the available methods nowadays allow the detection of thousands of phosphorylation sites in the very same experiment. The present review covers the main methods utilized in contemporary phosphoproteomics: phosphoprotein and phosphopeptides enrichment as well as the mass spectrometric analysis of protein phosphorylation.     

Mass spectrometric analysis of porcine rhodopsin

Rhodopsin is the dim light photosensitive pigment of animals. In this work, we undertook to study the structure of rhodopsin from swine and compare it with bovine and rat rhodopsin. Porcine rhodopsin was analyzed using methodology developed previously for mass spectrometric analysis of integral membrane proteins. Combining efficient protein cleavage and high performance liquid chromatography separation with the sensitivity of mass spectrometry (MS), this technique allows the observation of the full protein map and the posttranslational modifications of the protein in a single experiment. The rhodopsin protein from a single porcine eye was sequenced completely, with the exception of two single-amino acid fragments and one two-amino acid fragment, and the gene sequence reported previously was confirmed. The posttranslational modifications, similar to the ones reported previously for bovine and rat rhodopsin, were also identified. Although porcine rhodopsin has a high degree of homology to bovine and rat rhodopsins and most of their posttranslational modifications are identical, the glycosylation and phosphorylation patterns observed were different. These results show that rhodopsin from a single porcine eye can be characterized completely by MS. This technology opens the possibility of rhodopsin structural and functional studies aided by powerful mass spectrometric analysis, using the fellow eye as an internal control.     

Mass spectrometric sequencing of individual peptides from combinatorial libraries via specific generation of chain-terminated sequences

Combinatorial peptide libraries are a versatile tool for drug discovery. On-bead assays identify reactive peptides by enzyme-catalyzed staining and, usually, sequencing by Edman degradation. Unfortunately, the latter method is expensive and time-consuming and requires free N termini of the peptides. A method of rapid and unambiguous peptide sequencing by utilizing synthesis-implemented generation of termination sequences with subsequent matrix-assisted laser desorption ionization time of flight (MALDI-TOF) mass spectrometric analysis is introduced here. The required capped sequences are determined and optimized for a specific peptide library by a computer algorithm implemented in the program Biblio. A total of 99.7% of the sequences of a heptapeptide library sample could be decoded utilizing a single bead for each spectrum. To synthesize these libraries, an optimized capping approach has been introduced.     

Mass spectrometric analysis of high-purity carbon dioxide

A high-vacuum, low-temperature, continuous separation technique has been used in conjunction with a mass spectrometer for the analysis of carbon dioxide containing vpm amounts of H(2), He, CH(4), Ne, N(2), CO, O(2) and Ar. The method relies on the condensation of carbon dioxide on the walls of a glass U-tube, cooled in liquid nitrogen, connected between an inlet and the ion source. A high-pressure carbon dioxide sample thus enters the inlet leak but only the impurities pass through the U-tube and reach the ion source, resulting in considerable gain in sensitivity and elimination of interference from carbon dioxide. The sensitivity of the method is several orders of magnitude better than the normal mass spectrometric method.     

Mass spectrometric analysis of carbon monoxide-nitrogen mixtures

A method for the analysis of gas mixtures containing both carbon monoxide and nitrogen, by using a single-focussing mass spectrometer, is described. It involves measurement of the mass spectrum of a gas sample before and after conversion of the carbon monoxide present into carbon dioxide by means of the Schütze catalyst.     

Mass spectrometric analysis of mixtures without separation

Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 6, p. 1450, June, 1989.     

Mass spectrometric isotopic and trace analysis of187Os

The application of mass spectrometric methods in the determination of isotopic abundance and of trace elements in highly enriched¹⁸⁷Os is described. The capability of ICP-MS in comparison with solid-state mass spectrometric techniques (SIMS, SNMS and GDMS) for the precise isotopic analysis of highly-enriched osmium has been investigated. The formation of cluster ions in several plasma types has been measured, and the problems of possible interferences from molecular and cluster ions is discussed.     

Mass spectrometric analysis reveals O-methylation of pyruvate kinase from pancreatic cancer cells

Pyruvate kinase (PK) is an important glycolytic enzyme that catalyzes the dephosphorylation of phosphoenolpyruvate to pyruvate. Human PK isozyme M2 (PKM2), a splice variant of M1, is overexpressed in many cancer cells, and PKM2 has been investigated as a potential tumor marker for diagnostic assays and as a target for cancer therapy. To facilitate identification and characterization of PK, we studied the enzyme from pancreatic cancer cells and normal pancreatic duct cells by electrophoresis and mass spectrometry, and identified multiple O-methylated residues from PK. These findings advance our knowledge of the biochemical properties of PK and will be important in understanding its biological function in cells.

Mass spectrometric analysis of N-substituted cyclohexene-1,2-dicarboximides

Both low and high resolution mass spectra of cis-4-cyclohexene-1,2-dicarboximide, its N-methyl, N-ethyl, N-n-propyl and N-n-butyl derivatives, and cyclohexane-1,2-dicarboximide were obtained at 70 eV. Each of the spectra exhibited characteristic nominal ions at masses 151, 136, 123 and a group of ions at masses 77, 78, 79, 80 and 81 of which m/e 80 was always the base peak except for the unsubstituted cyclohexane compound. The m/e 77 to 81 fragments are composed of carbon and hydrogen and derived from the cyclohexene ring. The ions possessing higher masses are heterocyclic and certain of them show doublets and triplets. Evidence for a 1,3 hydrogen migration was supplied by studies with the N-(ethyl-2-d₃) derivative and evidence for a 1,4 migration by the N-(n-propyl-3-d₃) derivative.     

A型流感病毒血凝素蛋白S-棕榈酰化修饰的质谱分析

蛋白质S-棕榈酰化修饰是指棕榈酸分子通过硫酯键共价结合在蛋白质分子的半胱氨酸( S)的巯基侧链上,是蛋白质脂类修饰的重要形式之一,在细胞信号转导、代谢等过程中起着重要作用。本实验首先利用酰基-生物素置换反应,将A型流感病毒血凝素蛋白上的S-棕榈酸分子转换为含有生物素( Buotun)分子的标签。生物素标记蛋白经特异性富集、电泳分离纯化后,进行胶内水解。再利用质谱技术对水解混合物进行分析。结果表明,经酰基-生物素置换方法处理A型流感病毒裂解产物后,蛋白质耦联生物素的浓度(羟胺处理,＋Hydroxylamune)与空白对照组(未加羟胺处理,-Hydroxylamune)的比值大于3;对经富集后的流感病毒血凝素蛋白进行了质谱分析,鉴定了 A 型的两个 S-棕榈酰化修饰位点,分别位于蛋白羧基末端的 Cys562和Cys565。本研究为大规模研究S-棕榈酰化修饰蛋白提供了一种特异、有效的分析方法。     

Mass spectrometric identification of peptide hormones in doping-control analysis

The identification power of mass spectrometry has enabled the determination of hundreds of prohibited drugs in doping-control analysis. A few years ago, its utility was extended to peptide hormones such as erythropoietins, synthetic insulins and corticotrophins detectable in blood or urine. New assays have been established to improve the fight against doping, employing highly selective and sensitive detection methods based on chromatographic and tandem mass spectrometric techniques. In particular, in light of recent scandals related to assumed peptide hormone misuse and attempts at the alteration of urine, sophisticated analytical tools are essential for obtaining unequivocal results in sports drug testing.     

Mass spectrometric approach for the analysis of food proteins

In the study of food proteins, the need for accurate protein structural analysis has been acknowledged because of the fact that nucleotide sequencing alone is of limited analytical value if not combined with relevant information regarding the specific protein expressed and the occurrence of phosphorylation, glycosylation and disulphide bridges, and with the modification induced by the technological treatment. Mass spectrometry, whether used alone or to complement the traditional molecular-based techniques has become fundamental to the structural analysis of proteins. It is, moreover, virtually irreplaceable in determining post-translational modifications as conventional methods cannot deliver reliable data. What lies at the root of this methodological breakthrough is the combination of high-resolution separation techniques such as two-dimensional electrophoresis or capillary reverse- phase high-performance liquid chromatography with mass spectrometric analysis, what is termed "proteomic" analysis. Thus, it appears appropriate to state that the new mass spectrometric techniques have been established as a valuable and efficient tool for protein and peptide analysis in complex mixtures, like those from food matrices, enabling us therefore to provide accurate information on molecular weight and also to put forth a structural assessment at a low-picomole level of material. Thus, a series of alternative approaches have been developed based on advanced mass spectrometric analysis in conjunction with classic protein chemistry in order to provide an in-depth view of food protein structure. This review outlines several of these novel methodologies as they apply to structural characterization of food products.     

Mass spectrometric analysis of leukotriene A4 and other chemically reactive metabolites of arachidonic acid

The biosynthesis of prostaglandins and leukotrienes proceeds through the formation of chemically reactive intermediates leukotriene A4 (LTA4) and prostaglandin H2 (PGH2) which in aqueous solutions have chemical half-lives of 3 s and 3 min, respectively. Prostacyclin (PGI2) is another chemically reactive prostanoid that has a chemical half-life of 3-4 min. The recent development of reversed phase HPLC stationary phases that are stable to elevated pH (pH 10-12) without significant column damage has permitted direct analysis of these acid-sensitive eicosanoids. Using electrospray ionization, molecular anions [M - H]- of these compounds were observed at m/z 317 for LTA4 and m/z 351 for both PGH2 and PGI2. The mechanism of formation of ions derived from collisional activation of LTA4 was studied using stable isotope labeled and chemical analogs of LTA4 and found to involve formation of highly conjugated anions at m/z 261 and 163. The collisional activation of the molecular anion of PGH2 yielded a product ion spectrum identical to that observed for the isomeric prostaglandins PGE2 and PGD2. However, it was possible to baseline separate PGE2, PDG2, and PGH2 by reversed phase HPLC using basic HPLC mobile phases. The collisional activation of PGI2 led to a family of abundant ions including highly conjugated carbon-centered and oxygen-centered radical species (m/z 245 and 205) likely derived from the attack of the carboxylate anion on the cyclic enolether of PGI2 as well as the most abundant product ion (m/z 215) which formed following loss of neutral hexanal and water. The structures of these product ions were consistent with high resolution measurements measured in a quadrupole time-of-flight mass spectrometer.     

Mass spectrometric analysis of peptides from an immobilized lipase: focus on oxidative modifications

Liquid chromatography/tandem mass spectrometry (LC/MS/MS) was used to study the primary structure of immobilized Candida antarctica lipase B (Novozym®435) without detaching the enzyme from the carrier. The immobilized enzyme packed in a miniature column was subjected to proteolysis and the peptides released were injected into the mass spectrometer for analysis. The set‐up was utilized to determine amino acid oxidation after treatment of the biocatalyst with hydrogen peroxide. In total, sequence coverage of more than 90% was obtained, containing almost all of the amino acids sensitive to oxidation. Oxidation of methionine, tryptophan and cystine residues was observed. The flow system also allowed evaluation of the enzyme activity prior to peptide analysis. The developed method is general and should be applicable to other immobilized enzyme systems and to different treatments. Copyright © 2009 John Wiley & Sons, Ltd.     

Mass spectrometric analysis of carisoprodol and meprobamate in rat brain microdialysates

We report the evaluation of several mass spectrometry‐based methods for the determination of carisoprodol and meprobamate in samples obtained from the rat brain by in vivo intracranial microdialyis. Among the techniques that aspire to perform analyses without chromatographic separation and thereby increase throughput, chip‐based nanoelectrospray ionization and the use of an atmospheric pressure solids analysis probe fell short of requirements because of insufficient detection sensitivity and hard ionization, respectively. Although direct analysis in real time provided the required soft ionization, shortcomings of a tandem mass spectrometry‐based assay also included inadequate detection sensitivity and, in addition, poor quantitative reproducibility. Therefore, liquid chromatography coupled with atmospheric pressure chemical ionization tandem mass spectrometry was developed to determine carisoprodol and meprobamate from artificial cerebrospinal fluid as the medium. No desalting and/or extraction of the samples was necessary. The assay, combined with in vivo sampling via intracranial microdialyis, afforded time‐resolved concentration profiles for the drug and its major metabolite from the nucleus accumbens region of the brain in rats after systemic administration of carisoprodol. Copyright © 2016 John Wiley & Sons, Ltd.     

Mass spectrometric analysis of cyclofenil and its metabolites in human urine

Using gas chromatography/electron impact-mass spectrometry (GC/EI-MS) and high performance liquid chromatography with atmospheric pressure chemical ionization tandem mass spectrometry (HPLC/APCI-MS/MS), the structures of cyclofenil metabolites in human urine have been assigned. The hydroxyl metabolites liberated from the glucuronide conjugates after acid hydrolysis were characterized as the trimethylsilyl (O-TMS) derivatives using GC/MS. The conjugate glucuronide forms were detected without hydrolysis by HPLC/MS. Cyclofenil was not observed in urine. Tentative structures for the two metabolites are proposed.