Photochemistry of various acene based molecules

Photochemistry based on acenes and their derivatives is one of the emerging research areas in the field of polycyclic aromatic hydrocarbons (PAHs). However, due to the increased reactivity of larger acenes towards light and singlet oxygen, it is difficult to precisely control their photochemical reactions. Therefore, the unexpected reactivity of acene-based molecules brings about two challenging topics: how to design stable acenes and how to utilize the photochemistry to design new acene-based functional materials. In this review, we first focus on the mechanism of photochemistry of acenes to theoretically understand how these reactions could have happened. Next, we will give a summary on both acene-based photocyclization and photooxidation reactions.     

Synthesis, structure, aggregation-induced emission, self-assembly, and electron mobility of 2,5-bis(triphenylsilylethynyl)-3,4-diphenylsiloles

2,5-Bis(triphenylsilylethynyl)-3,4-diphenylsiloles with different 1,1-substituents [XYSi(CPh)(2) (C-C≡C-SiPh(3))(2)] (Ph=phenyl) were synthesized in high yields by the Sonogashira coupling of 2,5-dibromo-3,4-diphenylsiloles with triphenylsilylacetylene, and two of these were characterized crystallographically. Crystal structures and theoretical calculations showed that the new silole molecules had higher conjugation than 2,5-diarylsiloles. They possessed low HOMO and LUMO energy levels due to the electron-withdrawing effect of the triphenylsilylethynyl groups. Cyclic voltammetry analysis revealed low electron affinities, which were comparable to those of perfluoroarylsiloles. B3LYP/6-31* calculations demonstrated that the new siloles possessed large reorganization energies for electron and hole transfers and high electron mobilities. A mobility of up to 1.2×10(-5) cm(2) V(-1) s(-1) was obtained by the transient electroluminescence method, which was about fivefold higher than that of tris(8-hydroxyquinolinato)aluminum, a widely used electron-transport material, under the same conditions. All of the silole molecules possessed high thermal stability. Although, their solutions were weakly emissive, their nanoparticle suspensions and thin films emitted intense blue-green light upon photoexcitation, demonstrating a novel feature of aggregation-induced emission (AIE). Polarized emissions were observed in the silole crystals. The addition of solvents, which did not dissolve the silole molecules, into silole-containing solutions caused self-assembly of the molecules, which produced macroscopic fibrils with strong light emissions.     

低密度溶液中溶剂的重组织性质

分析了溶液的微观结构,结果表明,单个溶质粒子影响其周围的溶剂的结构,溶质粒子间的相互作用也将影响溶剂的结构,溶质对溶剂结构的影响称作溶剂的重组织.提出了二阶重组织能及二阶重组织熵等概念,可以描述在两个溶质粒子发生碰撞时对其周围溶剂结构的影响.利用二元系的集团展开理论,给出了溶剂的一阶、二阶重组织能和重组织熵的表达式.统计热力学分析给出了溶剂-溶剂径向分布函数与溶质和溶剂化学势之间的关系,给出了无限稀溶液模型是否成立的宏观判据.提出的理论可用于低密度的二元溶液.     

Lamellar thickening in polyethylene single crystals annealed under low and high pressure

Single crystals of linear polyethylene, prepared from a dilute xylene solution, were annealed below their melting temperature under atmospheric and 6 kbar pressure. In order to preserve the identity of the single crystals, they were suspended in an inert solvent medium, silicone oil and ethanol, during annealing. Examination of the annealed crystals under an electron microscope revealed development of numerous reorganization centers consisting of a central, elongated hole surrounded by a raised edge. Characteristics of these holes, especially their location and orientation, were interpreted in terms of the molecular packing that existed prior to the annealing and the mechanism of molecular reorganization that occurred during the annealing. The effect of high pressure was primarily to flatten out the crystals and to increase the number of reorganization centers, but the height of the raised edges remained about the same irrespective of the applied pressure. The present study also showed examples pointing to the importance of differentiating the annealing behavior of monolayer crystals from that of multilayer crystals.     

芴-含氮芳杂环共聚物的载流子注入特性

为了改善聚芴的载流子注入特性,采用密度泛函理论B3LYP/6-31G*方法计算比较了芴、芴-联吡啶和芴-菲咯啉低聚物的几何结构、电子结构、最低激发能及重组能等,并外推到相应聚合物.结果发现:联吡啶/菲咯啉含氮芳杂环的缺电子性质能够诱导聚芴的最高占据轨道(HOMO)和最低空轨道(LUMO)能级分别下降0.45/0.47eV和0.32/0.38eV,提高电子注入能力的同时,调控载流子注入平衡;联吡啶单元的引入导致电子和空穴重组能升高(降低聚芴的载流子迁移率),而芴-菲咯啉共聚物显示了与聚芴相似的迁移性能.     

A novel organic intercalation system with layered polymer crystals as the host compounds derived from 1,3-diene carboxylic acids

A new type of organic intercalation system using poly(muconic acid) and poly(sorbic acid) crystals as the host compounds is described. The layered polymer crystals as the host are derived from benzyl-, dodecyl-, or naphthylmethylammonium salts of (Z,Z)-muconic or (E,E)-sorbic acids by topochemical polymerization. The subsequent solid-state hydrolysis of the resulting ammonium polymer crystals provides the corresponding carboxylic acid polymer crystals. When alkylamines are reacted with poly(muconic acid) or poly(sorbic acid) crystals dispersed in methanol at room temperature for a few hours, the intercalation proceeds to give layered ammonium polymer crystals via solid-state reactions, in which the polymers maintain a layered structure throughout. The interplanar spacing value of the polymer crystals changes according to the size of the guest molecules; that is, it exactly depends on the carbon number of the alkylamines used for each reaction of poly(muconic acid) or poly(sorbic acid) crystals. The stacking structure of alkyl chains with a tilt in the intercalated alkylammonium layers exists irrespective of the chemical and crystal structures of the host polymers. The intercalation of higher alkylamines into poly(muconic acid) crystals proceeds fast and quantitatively, while the conversion is dependent on the reaction conditions such as the structure and amount of the amine and the reaction time during the intercalation with poly(sorbic acid) crystals, due to the difference in the repeating layered structures of these polymer crystals. Some functional amines are also used as the guest molecules for this organic intercalation system.     

Liquid-crystalline physical gels

Liquid-crystalline (LC) physical gels are a new class of dynamically functional materials consisting of liquid crystals and fibrous aggregates of molecules that are called "gelators". Liquid-crystalline physical gels, which are macroscopically soft solids, exhibit induced or enhanced electro-optical, photochemical, electronic properties due to the combination of two components that form phase-separated structures. In this tutorial review, we describe the materials design and structure-property relationships of the LC physical gels. The introduction of self-assembled fibers into nematic liquid crystals leads to faster responses in twisted nematic (TN) mode and high contrast switching in light scattering mode. Furthermore, the LC physical gels can be exploited as a new type of materials for electro-optical memory. This function is achieved by the control of reversible aggregation processes of gelators under electric fields in nematic liquid crystals. Electronic properties such as hole mobilities are improved by the introduction of fibrous aggregates into triphenylene-based columnar liquid crystals. The incorporation of photochromic azobenzenes or electroactive tetrathiafulvalenes into the chemical structures of gelators leads to the preparation of ordered functional materials.     

On-Surface Synthesis and Characterization of Acene-Based Nanoribbons Incorporating Four-Membered Rings

A bottom up method for the synthesis of unique tetracene-based nanoribbons, which incorporate cyclobutadiene moieties as linkers between the acene segments, is reported. These structures were achieved through the formal [2+2] cycloaddition reaction of ortho-functionalized tetracene precursor monomers. The formation mechanism and the electronic and magnetic properties of these nanoribbons were comprehensively studied by means of a multitechnique approach. Ultra-high vacuum scanning tunneling microscopy showed the occurrence of metal-coordinated nanostructures at room temperature and their evolution into nanoribbons through formal [2+2] cycloaddition at 475 K. Frequency-shift non-contact atomic force microscopy images clearly proved the presence of bridging cyclobutadiene moieties upon covalent coupling of activated tetracene molecules. Insight into the electronic and vibrational properties of the so-formed ribbons was obtained by scanning tunneling microscopy, Raman spectroscopy, and theoretical calculations. Magnetic properties were addressed from a computational point of view, allowing us to propose promising candidates to magnetic acene-based ribbons incorporating four-membered rings. The reported findings will increase the understanding and availability of new graphene-based nanoribbons with high potential in future spintronics.     

Ligand-induced reorganization and assembly in synthetic lipid membranes

Membrane targetting of soluble ligands accompanied by assembly of membrane components into functional superstructures underlies biological signal transduction and a variety of other processes ranging from blood coagulation to biomineralization. Protein or lipid components provide the interactions required for targetting and specific orientation of bound molecules; the membrane's fluidity allows reorganization and sampling of intermolecular contacts required for assembly into superstructures. We are developing synthetic membrane-based recognition systems capable of reproducing important features of biological targetting and assembly. Systems such as these may open up new routes to controlling molecular architecture in materials and devices. Specially designed metal-chelating receptor/reporter lipids have been used to study lipid reorganization induced by binding of metal-complexing ligands. Proteins and peptides are targetted to the Cu²⁺- and Ni²⁺-complexing lipids via coordination interactions with surface histidines. Binding and assembly of multivalent ligands are accompanied by reorganization of the lipid receptors, as measured by fluorescence spectroscopy and fluorescence microscopy. Coordination interactions between protein and chelating lipid components can be used for direct assembly into superstructures such as patterned lipid monolayers and two-dimensional protein crystals.     

Abiotic metallofoldamers as electrochemically responsive molecules

Described are the design, synthesis, and study of nonbiological molecules based on salophen and salen ligands that fold into single-stranded helices in the presence of either Ni(II) or Cu(II). X-ray diffraction studies show that the materials fold into helical structures in the solid state, and a series of NMR studies provide strong evidence that the folded structures are conserved in solution. Metal coordination is required for folding, as NMR and X-ray show that the free ligands do not adopt helical structures. Two of the racemic metallofoldamers spontaneously resolve during crystallization from CHCl3/acetonitrile, and CD spectroscopy and optical rotation show that the resolved, crystalline materials racemize quickly when dissolved at 5 degrees C. This shows that the secondary structures can reorganize easily and can, therefore, provide the basis for responsive materials. By comparison, an analogue from enantiomerically pure (R,R)-(-)-trans-cyclohexanediamine showed a strong CD signal and a large specific rotation. Electrochemical experiments show that a structural reorganization occurs upon metal-centered reduction of a Cu(II)-containing foldamer. When the reduction is carried out in the presence of coordinating ligands, it is proposed that apical binding of those ligands gives square pyramidal complexes. Semiempirical (AM1) calculations support that the helical structure would be disrupted by the reduction to Cu(I) with concomitant reorganization to a square pyramidal complex.     

Roles of amorphous calcium phosphate and biological additives in the assembly of hydroxyapatite nanoparticles

Potential mechanisms for formation of highly organized biomineralized structures include oriented crystal growth on templates, the aggregation of nanocrystals by oriented attachment, and the assembly of inorganic nanoparticles mediated by organic molecules into aggregated structures. In the present study, the potential role of amorphous calcium phosphate (ACP) in facilitating the assembly of hydroxyapatite (HAP) nanoparticles into highly ordered structures was evaluated. The physical characteristics of HAP nanoparticles prepared by three different methods were analyzed after extended exposure to additives in solution. Higher order HAP architecture was detected only when the starting particles were aggregates of nanospheres with HAP cores and ACP shells. Enamel-like HAP architecture was produced when the biologic additive was 10 mM glycine or 1.25 microM amelogenin. Large platelike crystals of the type present in bone were induced when the additive was 10 mM glutamic acid. Surface ACP initially links the HAP nanoparticles in a way that allows parallel orientation of the HAP nanoparticles and then is incorporated into HAP by phase transformation to produce a more highly ordered architecture with features that are characteristic for HAP in biologic structures. These studies provide evidence for a new mechanism for assembly of biominerals in which ACP functions by linking HAP nanocrystals while they assume parallel orientations and then is incorporated by phase transformation into HAP molecules that rigidly link HAP nanocrystals in larger fused crystallites. Biologic molecules present during this process of biomineral assembly specifically regulate the assembly kinetics and determine the structural characteristics of the final HAP architecture.     

Structural Changes in a Protein Fragment from Abalone Shell during the Precipitation of Calcium Carbonate

Mineralized tissues grow through biologically controlled processes in which specific macromolecules are involved. Some of these molecules, which are present in very low concentrations and are difficult to localize and characterize, become entrapped inside the mineralized tissue. Herein, a protein fragment, GP, which was obtained by the alkaline digestion of the green sheet of the abalone shell, is used as a probe to study the changes in molecular structure that occur during the precipitation of calcium carbonate. This important goal was achieved by exploiting a fluorescent tag in GP. The experimental results that were obtained by using spectroscopic‐, chromatographic‐, and microscopic techniques indicate that GP controls the precipitation kinetics and morphology of calcium carbonate crystals, and that it only undergoes structural reorganization when entrapped inside calcium carbonate crystals. To the best of our knowledge, this report represents one of the first studies on the conformational changes of a protein fragment that is involved in biomineralization processes on moving from the solution phase into the mineral phase.     

Cyanation: providing a three-in-one advantage for the design of n-type organic field-effect transistors

The theoretical work presented here demonstrates that, when substitution takes place at appropriate positions, cyanation could be a useful tool for reducing the internal reorganization energy of molecules. A molecular-orbital-based explanation is given for this fundamentally important phenomenon. Some of the cyanated pentacene derivatives (nCN-PENT-n) not only have internal reorganization energies for electron transfer (lambda(-)) smaller than that of pentacene, but the lambda(-) values are even of the same magnitude as the internal reorganization energy for hole transfer (lambda(+)) of pentacene, a small value that few organic compounds have surpassed. In addition, cyanation raises the electron affinity of the parent compound and may afford good electronic couplings between neighboring molecules, because of its ability in promoting pi-stacking. For the design of high performance n-Type Organic field-effect transistors, high electron affinities, large intermolecular electronic couplings, and small reorganization energies are necessary. Cyanation may help in all three aspects. Two cyanated trialkylsilylethynyl pentacene derivatives with known pi-stacking structures are predicted to provide reasonably small internal reorganization energies, large electronic couplings, and high electron affinities. They have the potential to outperform N-fluoroalkylated dicyanoperylene-3,4:9,10-bis(dicarboximides) (PDI-FCN(2)) in terms of electron mobility.     

一个低分子量聚氧化乙烯从亚稳态的折叠链片晶向稳态的伸直链片晶转化增厚过程的研究

报道分子量为5000的聚氧化乙烯(PEO)从熔融态淬火到液氮温度后形成的两次链折叠(2-FC)片晶增厚过程的研究结果.在升温和恒温条件下,采用小角X射线散射(SAXS)在位地跟踪了2-FC片晶增厚成一次链折叠(1-FC)和进一步成为伸直链(EC)片晶的增厚过程.通过对SAXS数据以及它们的一维相关函数的数据的分析,发现在52℃以下,2-FC片晶主要增厚为1-FC片晶;在52℃以上,2-FC片晶则主要增厚为EC片晶;在58℃到EC片晶的熔点的温度区域里,已经形成的1-FC片晶还会熔融,完全转化为EC片晶.利用偏光显微镜(PLM)和扫描电子显微镜(SEM)观察晶体的形貌,比如球晶,获得的研究结果表明,没有发生大范围的晶体破坏后再形成的变化,也就是说片晶的增厚过程是一个发生在球晶内部的薄片晶熔融后转化为厚片晶的过程.     

Shish-kebab structures of nylon-6 obtained from quiescent solutions by application of self-seeding

A study has been made of the morphology and structure of nylon-6 crystals grown from diluted 1,4-butanediol solution. Isothermal crystallization from homogeneous solution resulted in smooth ribbons or lath-shaped crystals aggregated into sheaves. Shish-kebab structures of nylon-6 could be grown from the quiescent solution by self-seeding techniques. Electron microscopic investigations and small-angle x-ray measurements showed that the molecules in the lath-shaped backbones of the shish kebab are folded and oriented perpendicular to the long axis of the crystals. The polyamide laths have the α-monoclinic crystal structure with the hydrogen bonds parallel to the long axis. It is suggested that due to the anisotropic type of bonding in the crystal lattice the crystals fragment laterally during the heating stage in the self-seeding technique. Structural defects, e.g., twinning sites introduced during the dissolution and subsequent crystallization may cause the growth of shish-kebab structures from quiescent solution.     

Hydrogen bond partner reorganization in the coadsorption of a monodendron and pyridylethynyl derivatives

Hydrogen bonds with high selectivity and directionality are significant in harnessing molecules to form 2D supramolecular nanostructures. The competition and reorganization of hydrogen bond partners determine the ultimate molecular assembly and pattern in a 2D supramolecular system. In this study, multicomponent assemblies of a monodendron (5-benzyloxy-isophthalic acid derivative, BIC) and pyridylethynyl derivatives [1,4-bis(4-pyridylethynyl)-2,3-bis-dodecyloxy-benzene (PBPC12) and 1,4-bis(4-pyridylethynyl)-2,3-bis-octadecyloxy-benzene (PBPC18)] have been studied by scanning tunneling microscopy (STM) on a graphite surface. BIC molecules are able to associate with PBPC12 and PBPC18 molecules to induce the rearrangement of hydrogen bond partners and form coassembly structures. Interestingly, BIC acts as a template molecule in the coassembly process, and these multicomponent structures exhibit similar structural features to the assembly structures of BIC itself. The structural details of the coassembled structures are revealed by high-resolution STM images, and their relationship with the original BIC assemblies is discussed. These results provide important insights into the design and fabrication of hydrogen-bond-directed multicomponent molecular nanostructures on solid surfaces.     

Co‐crystals with Acetylene: Small Is not Simple!

Acetylene is an amazingly versatile component for the formation of co‐crystals. It requires careful handling and special techniques for crystallisation, but the efforts seem to be rewarding when attaining co‐crystals with small molecules as partners. Many basic questions such as the dominance of specific heterogeneous intermolecular interactions, their driving force for the formation of multicomponent crystals instead of neat ones are expected to be easily analysed. The underlying packing patterns and resulting stoichiometries based on the known supramolecular synthons seem to be straightforward for such small molecules and crystal engineering, considered as the prototype of supramolecular synthesis, should be a simple task. Nineteen co‐crystals with acetylene are presented in this paper, some of which have been previously reported individually. An attempt has been made to find features shared by the groups of co‐crystals, including those that could not be co‐crystallised. But in spite of clear ideas and experiences from previous experiments, surprisingly almost none of systems reached our expectations. Our intuitive approach was not fulfilled, which demonstrates that multicomponent crystals even of small molecules will remain a great challenge for theoretical methods and the crystal structures shown herein represent good candidates for future testing. On the other hand, we wish to encourage other groups to present their views on the crystal structures with an unbiased approach that may offer a better explanation than we are able to outline in this article.     

Heterogeneous crystal growth of methane hydrate on its sII [001] crystallographic face

This paper presents a systematic molecular simulation study of the heterogeneous crystal growth of methane hydrate sII from supersaturated aqueous methane solutions. The growth of sII hydrate on the [001] crystallographic face is achieved through utilization of a recently proposed methodology, and rates of crystal growth of 1 A/ns were sustained for the molecular models and specific conditions employed in this work. Characteristics of the crystals grown as well as properties and structure of the interface are examined. Water cages with a 5(12)6(3) arrangement, which are improper to both sI and sII structures, are identified during the heterogeneous growth of sII methane hydrate. We show that the growth of a [001] face of sII hydrate can produce an sI crystalline structure, confirming that cross-nucleation of methane hydrate structures is possible. Defects consisting of two methane molecules trapped in large 5(12)6(4) cages and water molecules trapped in small and large cages are observed, where in one instance we have found a large 5(12)6(4) cage containing three water molecules.     

Amino Acid Assisted Incorporation of Dye Molecules within Calcite Crystals

Biomineralisation processes invariably occur in the presence of multiple organic additives, which act in combination to give exceptional control over structures and properties. However, few synthetic studies have investigated the cooperative effects of soluble additives. This work addresses this challenge and focuses on the combined effects of amino acids and coloured dye molecules. The experiments demonstrate that strongly coloured calcite crystals only form in the presence of Brilliant Blue R (BBR) and four of the seventeen soluble amino acids, as compared with almost colourless crystals using the dye alone. The active amino acids are identified as those which themselves effectively occlude in calcite, suggesting a mechanism where they can act as chaperones for individual molecules or even aggregates of dyes molecules. These results provide new insight into crystal–additive interactions and suggest a novel strategy for generating materials with target properties.