Supramolecular polymers fabricated by orthogonal self-assembly based on multiple hydrogen bonding and macrocyclic host–guest interactions

Supramolecular polymers constructed by orthogonal self-assembly based on multiple hydrogen bonding and macrocyclic host-guest interactions have received increasing attention due to their elegant structures,outstanding properties,and potential applications.Hydrogen bonding endows these supramolecular polymers with good adaptability and reversibility,while macrocyclic host-guest interactions give them good selectivity and versatile stimuli-responsiveness.Therefore,functional supramolecular polymers fabricated by these two highly specific,noninterfering interactions in an orthogonal way have shown wide applications in the fields of molecular machines,electronics,soft materials,etc.In this review,we discuss the recent advances of functional supramolecular polymers fabricated by orthogonal self-assembly based on multiple hydroge n bonding and host-guest interactions.In particular,we focus on crown ether-and pillar[n]arene-based supramolecular polymers due to their compatibility with multiple hydrogen bonds in organic solution.The fabrication strategies,interesting properties,and potential applications of these advanced supramolecular materials are mainly concerned.     

The art of stacking: structural folding and self-assembly of branched π-conjugation assisted by O-H···O and C-H···F hydrogen bonds

An intimate interplay of O-H···O/C-H···F hydrogen bonds and π-π stacking interactions allows a phenyleneethynylene-based dendritic molecule to fold and self-assemble into two distinctively different molecular crystals as pseudopolymorphs.     

Comparative estimation of the energies of intramolecular C-H…O,N-H…O,and O-H…O hydrogen bonds according to the QTAIM analysis and NMR spectroscopy data

The energies of intramolecular C-H…O, N-H…O, and O-H…O hydrogen bonds in model compounds are empirically estimated based on the values of the hydrogen bond induced weak-field shift of the bridging hydrogen atom signal in the ¹H NMR spectrum. It is supported by a theoretical estimation of these energies based on the electron density value at the hydrogen bond critical point calculated within the QTAIM method. Good agreement between the empirical and theoretical estimates is found, which gives evidence of their reliability. It is shown that from the standpoint of their strength the intramolecular N-H…O and O-H…O hydrogen bonds can be classified as moderate whereas the intramolecular C-H…O hydrogen bonds must be classified as very weak interactions similar in their energy significance to van der Waals interactions.     

Theoretical study of the N-H…O red-shifted and blue-shifted hydrogen bonds

Theoretical calculations are performed to study the nature of the hydrogen bonds in complexes HCHO…HNO, HCOOH…HNO, HCHO…NH3, HCOOH…NH3, HCHO…NH2F and HCOOH…NH2F. The geometric structures and vibrational frequencies of these six complexes at the MP2/6-31 G(d,p), MP2/6-311 G(d,p), B3LYP/6-31 G(d,p) and B3LYP/6-311 G(d,p) levels are calculated by standard and counterpoise-corrected methods, respectively. The results indicate that in complexes HCHO…HNO and HCOOH…HNO the N-H bond is strongly contracted and N-H…O blue-shifted hydrogen bonds are observed. While in complexes HCHO…NH3, HCOOH…NH3, HCHO…NH2F and HCOOH…NH2F, the N-H bond is elongated and N-H…O red-shifted hydrogen bonds are found. From the natural bond orbital analysis it can be seen that the X-H bond length in the X-H…Y hydrogen bond is controlled by a balance of four main factors in the opposite directions hyperconjugation, electron density redistribution, rehybridization and structural reorganization. Among them hyperconjugation has the effect of elongating the X-H bond, and the other three factors belong to the bond shortening effects. In complexes HCHO…HNO and HCOOH…HNO, the shortening effects dominate which lead to the blue shift of the N-H stretching frequencies. In complexes HCHO…NH3, HCOOH…NH3, HCHO…NH2F and HCOOH…NH2F where elongating effects are dominant, the N-H…O hydrogen bonds are red-shifted.     

Helix-forming self-assembly of enantiopure 2,2′-dimethylbiphenyl-6,6′-dipropiolic acid and amide organized by hydrogen bonds

Single-crystal X-ray diffraction revealed that the molecules of both the title compounds (S)-5 and (S)-6 are linked, via double hydrogen bonds, in infinite chains which follow the crystallographic symmetry of the three- and four-fold screw axis, respectively. To our knowledge this represents the first documented case when intermolecular carboxylic hydrogen bond constitutes an integral part of a helix backbone set up from repeating homochiral subunits.     

MO investigations on lignin model compounds: IX. A PCILO study of the hydrogen bond O-H…O and O-H…N type formed by phenol with some proton acceptors

A systematic PCILO study has been carried out on the intermolecular hydrogen bond formed by phenol with proton acceptors such as acetone, ether, p-benzoquinone, N,N-dimethylformamide, trimethylamine, pyridine, acetonitrile and acrylonitrile. The complexes studied form hydrogen bonds with energy intervals of 20 − 45 kJ mol⁻¹ at distances R_O…Y = 0.265 − 0.300 nm (Y=N,0). For the system phenol-pyridine both the 1:1 complex PhPy and the 2:1 complex Ph₂Py were also studied. The calculated hydrogen bond energies are compared and discussed with experimental data from the literature. The calculated hydrogen bond and O-H stretching force constants are in range expected.     

N-H…X (X = F, Cl, Br, and I) hydrogen bonding in aromatic amide derivatives in crystal structures

Intramolecular N H···X (X=F, Cl, Br, and Ⅰ) hydrogen bonding patterns of aromatic amides in the solid state are summarized. It is revealed that the key for the formation of this kind of weak intramolecular hydrogen bonding in X-ray crystal structures is to suppress the competition of strong intermolecular N H···O C hydrogen bonding of the amide unit. For amides with identical backbones, the bonding capacity of halogen atoms as hydrogen bonding acceptors is in the order of F>Cl>Br>I, which is in accordance with their electronegativity strength. Generally, the five-membered hydrogen bonding is easier to form than the six-membered one.     

Gear-like array of (H_2O)_(12) as building blocks in one-dimensional supramolecular assembly

The preparation and crystal structure of complex Co(Hsae)_2·2H_2O (1,H_2sae=N-salicylidene-2-iminoethanol) are reported.X- ray analysis revealed that every six Co(Hsae)_2 forms a cyclic chip and every 12 water forms a novel gear-like cluster.Acting as building blocks,the gear-like water cluster and complex chip are connected in A-B fashion and extend into one-dimensional supramolecular chain.Hydrogen bond is the primary bridging force in the formation of supramolecular framework.     

Spectroscopic Studies of a Three-dimensional, Five-coordinated Copper(Ⅱ) Complex via Hydrogen Bonds: [Cu(PDA)(H_2O)_2](H_2PDA=Pyridine-2,6-dicarboxylic Acid)

IntroductionFive- coordinated complexes with d9- configuredcations have received much attention stereochemi-cally,spectrochemically and biologically,and havebeen comprehensively discussed[1] . Usually thereare two stable configurations for the copper( )complexes with five equal coordinating atoms:anapically elongated square pyramid( SP) and a com-pressed trigonal bipyramid( TBP) ,with an obviousenergetic preference for the latter coordination.When the ligands are rigid and provide angular d…     

Chiral self-assembly of methyltin(IV)-naproxenates: Combining dative Sn-O bonds, secondary Sn?O interactions and C-H?O hydrogen bonding to make an inter-helical meander-shaped network and a cross-linked Z-shaped ribbon

Three new chiral organotin(IV) carboxylates, Me₂Sn(nap)₂ (1), {[Me₂Sn(nap)]₂O}₂ (2) and Me₃Sn(nap) (3) (nap = (S)-(+)-6-methoxy-α-methyl-2-naphthaleneaceto anion) have been synthesized. All of them have been characterized by elemental analysis, multinuclear (¹H, ¹³C and ¹¹⁹Sn) NMR and IR spectroscopy. The crystal structures of 1 and 2 have been determined by X-ray diffraction analysis. The bicapped tetrahedral molecules of 1 are linked by C-H?O hydrogen bonds into homochiral helices, which are also interconnected by C-H?O interactions to form an inter-helical meander-shaped network. The molecule of 2 is a parallel double helix incorporating four chiral tin centers in a Sn₄O₁₀C₄ ladder type molecular skeleton. The C-H?O interactions translate the molecular chirality of 2 throughout the crystal via formation of infinite ribbons. These ribbons in their turn are further cross-linked by C-H?O hydrogen bonds. The structural characterization of the complexes 1-3 in solution has been performed by routine multinuclear ¹H, ¹³C and ¹¹⁹Sn NMR as well as specialized multidimensional (¹H-¹¹⁹Sn-gHMQC and ¹H-DOSY) experiments. The relevant ²J_{¹H-¹¹⁹Sn} and ¹J_{¹³C-¹¹⁹Sn} coupling constants have been extracted and related to molecular geometries on the basis of the literature data. The measurement of the translational diffusion constants using diffusion ordered spectroscopy allowed the estimation of the spherical hydrodynamic radii of the newly prepared structures.     

A quantum-chemical study of the possibility to synthesize nuclear spin isomers of water by homogeneous catalytic hydrogenation of compounds containing semipolar X → O bonds (X = N,P, S) with hydrogen

The mechanism of catalytic hydrogenation of compounds with semipolar bonds R_nX → O (R_nX = N₂, Me₂S, C₅H₅N, and Ph₃P) on the (Ph₃P)₃RhCl Wilkinson catalyst with para-hydrogen was modeled quantum-chemically by the density functional theory method with the gradient-corrected nonempirically constructed PBE functional and the TZ2p basis set. The reaction was shown to involve a reaction channel in which the sequential transfer of two hydrogen atoms to oxygen occurred intramolecularly in the coordination sphere of rhodium with the conservation of the spin correlation of protons. This opens up the possibility in principle of using this reaction to prepare para-H₂O, one of the nuclear spin isomers of water in which proton spins are antiparallel.     

Vibrational circular dichroism of 2,6-di-sec-butyl-4-methylpyridine and 2,6-di-sec-butyl-4-methylpyridine-N-oxide: theoretical evidence on the existence of multiple –CH, –CH2, and –CH3⋯O intramolecular hydrogen bonds on the nitroxide oxygen

Enantiopure (±)-2,6-di-sec-butyl-4-methylpyridine and its oxidized form (±)-2,6-di-sec-butyl-4-methylpyridine-N-oxide were prepared and then separated by chiral HPLC. Their stereochemical structures and their conformational distribution in solution were investigated using vibrational circular dichroism (VCD) and infrared spectroscopy (IR) combined with density functional theory (DFT). The experimental spectra have been compared with theoretical data. This comparison indicated that (−)-2,6-di-sec-butyl-4-methylpyridine and its oxidized form (+)-2,6-di-sec-butyl-4-methylpyridine-N-oxide have an (S,S)-configuration and exist in several conformations. The good fit confirms the reliability of the conformational analysis. Our results indicated that going from the reduced form to the oxidized one strongly influences the type of conformers in solution. Moreover, DFT calculations showed that for all of the conformers of (S,S)-2,6-di-sec-butyl-4-methylpyridine-N-oxide, the formation of four centered intramolecular hydrogen bonds between the hydrogen of the –CH, –CH₂, and –CH₃ groups and the nitroxide oxygen is possible. Moreover the stability of the conformers of both compounds is influenced by the all-trans structure of the sec-butyl moieties.     

DFT studies and AIM analysis of intramolecular N–H···O hydrogen bonds in 3-aminomethylene-2 methoxy-5,6-dimethyl-2-oxo-2,3-dihydro-2λ5-[1,2]oxaphosphinin-4-one and its derivatives

The intramolecular N–H···O hydrogen bonds in 3-aminomethylene-2 methoxy-5,6-dimethyl-2-oxo-2,3-dihydro-2λ⁵-[1,2]oxaphosphinin-4-one and its derivatives (F, H, Li, -BeH) were studied by DFT (density functional theory) methods. The results of calculations were obtained at B3LYP/6-311++G(d,p) level on model species, with the resonance-assisted hydrogen bonds (RAHB). Topological parameters such an electron density, its Laplacian, kinetic electron energy density, potential electron energy density, and total electron energy density at the bond critical points (BCP) of H···O/N–H contact bonds from Bader’s ‘Atoms in molecules’ (AIM) theory were analyzed in details. The energy of the N–H···O interactions studied here was found rather weak (E _HB = 2.53–12.08 kcal/mol). The results of AIM ellipticity indicated π-delocalization over all six atoms within ring.     

№Determination of Trace Arsenic by Solid Substrate-Room Temperature Phosphorescence Quenching Method Based on the Catalyzed Reaction of H2O2 Oxidizing 9-Hyd roxy-2,3,4,9-tet rahyd ro-1,10-anth raquinone

A new solid substrate-room temperature phosphorescence （SS-RTP） quenching method for the determination of trace As（V） has been developed, based on the facts that 9-hydroxy-2,3,4,9-tetrahydro-1,10-anthraquinone （R） can emit intense and stable SS-RTP on solid substrate, and α,α＇-dipyridyl can activate As（V） catalysis of the reaction of H2O2 oxidizing R to non-phosphorescence compound R＇, which can cause the sharp quenching of SS-RTP. Under the optimum condition, the relationship between the ΔIp of the emitting intensity and 1.60-160 fg·spot^-1 As（V） （corresponding concentration： 0.0040-0.40 ng·mL^-1, sample volume： 0.4 μL·spot^-1） conformed to Beer＇ law. The regression equation of working curve can be expressed as ΔIp= 20.46＋0.5492CAs（v） fig·spot^-1） （r= 0.9995, n = 6）. The limit detection （LD） is 0.27 fg·spot^-1 [As（V） corresponding concentration： 6.8 × 10^-13 g·mL^-1, n=11]. The samples containing 0.0040 and 0.40 ng·mL^-1 As（V） were repeatedly determined for 11 times. RSD are 3.0% and 2.7% respectively. The SS-RTP mechanism was also discussed. R was synthesized in this paper. Meanwhile, the structure was determined by NMR, IR, mass spectra and elemental analysis.