PHOTOCHEMICAL AND FREE RADICAL INITIATED REACTIONS OF 1,3-DIMETHYLTHYMINE WITH ETHANOL

The photochemically induced reaction of 1,3-dimethylthymine (DMT) with ethanol gives four major alcohol adducts. These have been identified as l,3-dimethyl-6-(1-hydroxy-1-ethyl)thymine ( 1 ), 1,3-dimethyl-5-(2-hydroxy-l-pyl)uracil ( 2 ), and the cis and trans isomers of 5,6-dihydro-l,3-di-methyl-6-(l-hydroxy-l-ethyl) thymine ( 3 and 4 ). The compounds 3 and 4 have been shown to be identical to the adducts produced in y-ray irradiated ethanolic aqueous solutions of DMT. Cyclobutane dimers of DMT are also found in the photochemical reaction mixture. Reaction of 1-hydroxyethyl radicals with DMT, initiated by decomposition of di-t-butyl peroxide, leads to formation of the same alcohol adducts, as well as to DMT adducts containing two molecules of ethanol. The acetone sensitized reaction of DMT with ethanol gives 1,3, and 4, along with a variety of adducts incorporating the acetone sensitizer.     

PHOTOCHEMICAL REACTIONS OF CYTOSINE N-METHYL ANALOGS IN ALCOHOLIC SOLUTION

Abstract— –The photochemical reactions of 1-methylcytosine (la), 1, N^4-dimethylcytosine (Ib), and 1, N⁴. N^4-trimethylcytosine (Ic) in isopropanol have been investigated. In all three reactions addition of isopropanol occurs across the 5,6-double bond of the pyrimidine ring. For example, in the case of Ir photo-reaction with isopropanol leads to formation of 5,6-dihydro-6–(2-hydroxy-2-propyl)-l, N⁴, N^4-trimethylcytosine (IIc). In all three reactions 5,6-dihydro-l-methyluracil (III) was also isolated as a product; in the case of Ic, 5,6-dihydro-1, N⁴, N⁴-trimethylcytosine (IV) was isolated as well. Evidence is presented that indicates cytosine, cytidine, and 2',3'-isopropylidene cytidine also form adducts with isopropanol. Photoinduced reaction of Ic with ethanol leads to formation of 5.6-dihydro-6–(l-hydroxy-l-ethyl)-l, N⁴. N^4-trimethylcytosine (V).
Both acetone sensitization and di-t-butyl peroxide initiated free radical reactions of Ib with isopropanol leads to formation of an adduct identical to that formed in the unsensitized photochemical reaction of Ib with isopropanol.     

Synthesis and investigation of the chemical and physicochemical properties of 6-(1,4,5,6-tetrahydro-6-oxo-3-pyridazinyl)-2,3-dihydro-2-indolinones

Acylation of 1-ethyl-3-(N,N-dimethyl)aminomethylene-1,2-dihydro-2-indolinone by succinic anhydride in the presence of aluminum chloride has been studied. PMR spectroscopy shows that this acylation leads to formation of a mixture of the 5- and 6-succinoyl derivatives with predominance of the latter (cis and trans isomers of both these products were found). The reaction of the latter with hydrazine hydrate gives hydrazinomethylene derivative of 2-indolinone, in reaction of which with various carbonyl compounds a series of oxindol hydrazones has been obtained. The reaction of these products with primary amines smoothly leads to transamination and the formation of enamines of 1,6-disubstituted 2-indolinone. NIOPIK Russian Federation State Science Center, 103787 Moscow, Russia and TsKhLS-VNIKhFI, 119815 Moscow, Russia. Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 10, pp. 1347–1355, October, 1999.     

Photochemically induced reaction of 1, N4-dimethylcytosinewith isopropanol

Photoexcited 1, $\text{N}$⁴-dimethylcytosine (I) adds isopropanol to form 5,6-dihydro-1, $\text{N}$⁴-dimethyl-6-(2-hydroxy-2-propyl)cytosine (II) as the major product; a small amount of 5,6-dihydro-1-methyluracil (III) is formed as well.     

Reaction of 1,3-Dioxanes with Acetone Cyanohydrin

The reaction of 4-phenyl- and 4,4-dimethyl-1,3-dioxanes with acetone cyanohydrin leads to hydrolytically unstable 2-(1-hydroxy-1-methylethyl)-5,6-dihydro-1,3-oxazines, which are readily saponified in alkaline medium to the corresponding 1,3-amino alcohols.     

Synthesis and Properties of 7-Acetyl-8-aryl-9-cyano-3-hydroxy-6-methyl-3,4-dihydro-2H,8H-pyrido[2,1-<Emphasis Type="Italic">b</Emphasis>][1,3]thiazines

7-Acetyl-8-aryl-2-(1-chloro-2-hydroxy-3-propyl)thio-9-cyano-6-methyl-1,4-dihydropyridines were obtained by treatment of 1,4-dihydropyridine-2(3H)-thiones with epichlorohydrin in the presence of sodium bicarbonate. When treated with NaOMe, these compounds are readily intramolecularly alkylated with formation of 7-acetyl-8-aryl-3-hydroxy-9-cyano-6-methyl-3,4-dihydro-2H,8H-pyrido[2,1-b]-[1,3]thiazines. We have studied amination of 2-(1-chloro-2-hydroxy-3-propyl)thio-1,4-dihydropyridines and acylation of 3-hydroxy-3,4-dihydro-2H,8H-pyrido[2,1-b][1,3]thiazines. __________ Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 9, pp. 1394–1399, September, 2005.     

Addition-Rearrangement of Aryl- and Alkoxysulfonyl Isocyanates with 5-Methyl-Substituted 3,4-Dihydro-2-methoxy-2H-pyrans. Selective Synthesis of Functionalized 2-Piperidones(1)

3,4-Dihydro-2-methoxy-5-methyl-2H-pyran and 3,4-dihydro-2-methoxy-5,6-dimethyl-2H-pyran undergo addition-rearrangement reactions with arylsulfonyl isocyanates to generate the corresponding 3-formyl- and 3-acetyl-6-methoxy-3-methyl-1-(arylsulfonyl)-2-piperidones. For example, 3,4-dihydro-2-methoxy-5-methyl-2H-pyran and phenylsulfonyl isocyanate afforded 3-formyl-6-methoxy-3-methyl-1-(phenylsulfonyl)-2-piperidone as a separable trans/cis mixture in high yield. The more reactive phenoxysulfonyl and alkoxysulfonyl isocyanates provided analogous results.     

THE PHOTOREACTIONS AND FREE RADICAL INDUCED REACTIONS OF 1,3-DIMETHYLURACIL IN METHANOL AND OTHER ALCOHOLS

Abstract— Photoexcited 1,3-dimethyluracil (DMU) reacts with methanol to give 1,3-dimethyl-6-hydroxymethyl-5-hydrouracil ( 1 a) in addition to cyclobutane type dimers and 1,3-dimethyl-6-methoxy-5-hydrouracil ( 2 a). Free radical induced reaction, initiated by photodecomposition of di- t -butyl peroxide with light of wavelength greater than 290nm, leads to 1 a, 5,6-dihydroxymethyl-5,6-dihydro-1,3-dimethyl-uracil ( 1 d) and 6-hydroxymethyl-1,3-dimethyluracil as the products.     

Role of axial donors in the ligand isomerization processes of quadruply bonded dimolybdenum(II) compounds

Quadruply bonded dimolybdenum(II) complexes with NP-R (2-(2-R)-1,8-naphthyridine; R = thiazolyl (NP-tz), furyl (NP-fu), thienyl (NP-th)) and 2,3-dimethyl-1,8-naphthyridine (NP-Me 2) have been synthesized by reactions of cis-[Mo2(OAc)2(CH3CN)6][BF4]2 with the corresponding ligands. The products cis-[Mo2(NP-tz)2(OAc)2][BF4]2 (1), trans-[Mo2(NP-fu)2(OAc)2][BF4]2 (2), trans-[Mo2(NP-th)2(OAc)2][BF4]2 (3), and trans-[Mo2(NP-Me2)2(OAc)2][BF4]2 (4) were isolated and characterized. The NP-R ligands with stronger R = pyridyl and thiazolyl donors result in cis isomers whereas the weaker furyl and thienyl appendages lead to compounds having a trans orientation of the ligands. The use of NP-Me2 leads to a trans structure with a tetrafluoroborate anion occupying one of the axial sites. Complete replacement of two acetate groups by acetonitrile in 1 and 2 resulted in the cis isomers [Mo2(NP-tz)2(CH3CN)4][OTf]4 (5) and [Mo2(NP-fu)2(CH3CN)4][OTf]4 (6) respectively. The combination of one acetate and two acetonitriles as ancillary ligands, however, yields trans-[Mo2(NP-tz)2(OAc)(CH3CN)2][BF4]3 (7) in the solid state as determined by X-ray crystallography. (1)H NMR spectra of the products are diagnostic of the cis and trans dispositions of the ligands. Solution studies reveal that the ligand arrangements observed in the solid state are mostly retained in the acetonitrile medium. The only exception is 7, for which a mixture of cis and trans isomers are detected on the NMR time scale. The isolation of trans compounds 2- 4 from the cis precursor [Mo2(OAc)2(CH3CN)6][BF4]2 indicates that an isomerization process occurs during the reactions. The mechanism involving acetate migration through axial coordination has been invoked to rationalize the product formation. Compounds 1- 7 were structurally characterized by single-crystal X-ray methods.     

Regioselective, stereoselective, and conformationally controlled synthesis of (η4-tetraarylcyclobutadiene)(η5-carbomethoxycyclopentadienyl)cobalt metallocenes

The Friedel-Crafts reaction of (η(4)-tetraphenylcyclobutadiene)(η(5)-carbomethoxycyclopentadienyl)cobalt with acid chlorides/aluminum chloride resulted exclusively in para-phenyl acylation. Both monoacylated (1.1 equiv of RCOCl/AlCl(3)) and tetraacylated products (>4 equiv of RCOCl/AlCl(3)) were synthesized. Reaction of PhCC(o-RC(6)H(4)) (R = Me, i-Pr) with Na(C(5)H(4)CO(2)Me) and CoCl(PPh(3))(3) gave predominantly (η(4)-1,3-diaryl-2,4-diphenylcyclobutadiene)(η(5)-carbomethoxycyclopentadienyl)cobalt metallocenes (1,3-[trans] vs 1,2-[cis] selectivity up to 6:1). Conformational control of Friedel-Crafts reactions on the major isomers gave exclusively para-acylation of the unsubstituted phenyl groups.     

Synthesis and structure of 6-substituted 9-(2-ethoxy-1,3-dioxan-5-yl)purines

The reaction of 4-chloro-5-amino-6-(1,3-dihydroxy-2-propyl)aminopyrimidine with excess ethyl orthoformate gave a cyclic acetal, viz., 6-chloro-9-(2-ethoxy-1,3-dioxan-5-yl)purine, amination of which yielded 6-amino-9-(2-ethoxy-1,3-dioxan-5-yl)purine. The presence of two configurational isomers with a diaxial orientation of the purine ring and the ethoxy group in the trans isomer and an equatorial orientation of the ethoxy group in the cis isomer was established for these compounds by ¹H and ¹³C NMR and IR spectroscopy. The three-dimensional structure of trans-6-chloro-9-(2-ethoxy-1,3-dioxan-5-yl)purine was determined by an x-ray difraction study, and the trans-diaxial orientation of the purine ring and the ethoxy group was confirmed; it is shown that the dioxane ring is in an anti conformation relative to the purine ring.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 7, pp. 976–983, July, 1979.     

Azines and azoles: CXXV. New regioselective synthesis of 1-amino-6-methyluracils

Readily accessible 5-acetyl-4-hydroxy-3,6-dihydro-2H-1,3-thiazine-2,6-dione reacts with substituted hydrazines and carboxylic acid hydrazides under mild conditions to give the corresponding hydrazones. Under severe conditions (heating in boiling dimethylformamide) the reaction is accompanied by extrusion of COS with formation of substituted 1-amino-6-methyluracils. Reactions of 5-acetyl-4-hydroxy-3,6-dihydro-2H-1,3-thiazine-2,6-dione with monosubstituted alkyl-and arylhydrazines take different pathways, depending on the conditions. Heating of equimolar mixtures of the reactants in ethanol or propan-1-ol leads to the formation of 2-substituted 5-methyl-3-oxo-2,3-dihydro-1H-pyrazole-4-carboxamides rather than 1-amino-6-methyluracil derivatives.     

Remarkable interplay of redox states and conformational changes in a sterically crowded, cross-conjugated tetrathiafulvalene vinylog

Derivatives of 9-[2-(1,3-dithiol-2-ylidene)ethylidene]thioxanthene have been synthesized using Horner-Wadsworth-Emmons reactions of (1,3-dithiol-2-yl)phosphonate reagents with thioxanthen-9-ylidene-acetaldehyde (5). Further reactions lead to the sterically crowded cross-conjugated "vinylogous tetrathiafulvalene" derivative 9-[2,3-bis-(4,5-dimethyl-1,3-dithiol-2-ylidene)-propylidene]thioxanthene (10). X-ray crystallography, solution electrochemistry, optical spectroscopy, spectroelectrochemistry, and simultaneous electrochemistry and electron paramagnetic resonance spectroscopy, combined with theoretical calculations performed at the B3LYP/6-31G(d) level, elucidate the interplay of the electronic and structural properties in these molecules. For compound 10, multistage redox behavior is observed: the overall electrochemical process can be represented by 10-->10(.+)-->10(2+)-->10(4+) with good reversibility for the 10-->10(.+)-->10(2+) transformations. At the tetracation stage there is the maximum gain in aromaticity at the dithiolium and thioxanthenium rings. Theory predicts that for 10, 10(.+), and 10(2+) the trans isomers are more stable than the cis isomers (by ca. 2-18 kJ mol(-1)), whereas for 10(4+) the cis isomer becomes more stable than the trans isomer (by ca. 25 kJ mol(-1)) [trans and cis refer to the arrangement of the two dithiole moieties with respect to the central ==C(R)--C(H)== fragment]. These data explain the detection in cyclic voltammograms of both trans and cis isomers of 10 and 10(.+) during the reduction of 10(4+) at fast scan rates (>100 mV s(-1)) when the cis-trans isomerization is not completed within the timescale of the experiment. The X-ray structure of the charge-transfer complex (CTC) of 10 with 2,4,5,7-tetranitrofluorene-9-dicyanomethylenefluorene (DTeF) [stoichiometry: 10(.+)(DTeF)(2) (.-)2 PhCl] reveals a twisted conformation of 10(.+) (driven by the bulky thioxanthene moiety) and provides a very rare example of segregated stacking of a fluorene acceptor in a CTC.     

Competitive formation of cis and trans derivatives in the nucleophilic substitution reactions of cyclophosphazenes having a mono-spiro P-NHR group

Nucleophilic substitution reactions of N(3)P(3)Cl(4)[NH(CH(2))(3)NMe] (1) and N(3)P(3)Cl(4)[NH(CH(2))(3)O] (2) with mono-functional alcohols (methanol, 2,2,2-trifluoroethanol, phenol) and a secondary amine (pyrrolidine) were used to investigate the relationship between the incoming nucleophile and the proportions of products with substituents that are cis or trans to the spiro NH moiety. The reaction products were characterized by elemental analysis, mass spectrometry, (1)H and (31)P NMR spectroscopy and the configurational isomers by X-ray crystallography. Six products have been characterised with the substituent cis to the spiro NH group for the alcohol (methanol, phenol) and pyrrolidine derivatives of both compounds 1 and 2, compared to just one derivative with the substituent trans to the spiro NH group, that for the pyrrolidine derivative of compound 2. For each reaction the relative proportions of cis and trans isomers were determined by (31)P NMR measurements of the reaction mixtures. It was found that the reactions of compound 1 with all three alcohols and of compound 2 with methanol lead to exclusive formation of isomers with the substituent cis to the NH moiety, whereas all other reactions lead to mixtures of cis and trans isomers in different ratios under standard reaction conditions. However, when crown ether is included in the reaction medium for the reactions of compound 2 with both 2,2,2-trifluoroethanol and phenol, it is found that only cis isomers are formed. All these results are rationalised in terms of the competition between at least two effects; the cis-directing effect by hydrogen bonding of the incoming nucleophile to the spiro N-H group already present on the cyclophophazene ring and the cis-directing effect of the sodium cation coordinating to the oxygen lone pairs of the P-O moiety of the spiro ring.     

PHOTO-OXIDATION OF THYMINE SENSITIZED BY 2-METHYL-1,4-NAPHTHOQUINONE: ANALYSIS OF PRODUCTS INCLUDING THREE NOVEL PHOTO-DIMERS

Abstract —The near-UV photosensitization of thymine by 2-methyl-1,4-naphthoquinone in oxygenated aqueous solution leads to the formation of nine major thymine-derived products. Six of the photoproducts, representing 70% of the initial thymine loss, are also known to be formed by γ-ray or X-ray irradiation of oxygenated water solutions of thymine. They include the cis and trans isomers of 5-hydroperoxy-6-hydroxy-5,6-dihydrothymine, the cis and trans thymine glycols, 5-hydroxy-5-methylhydantoin, and N-formyl-N'-pyruvylurea. The three remaining major products, accounting for a further 25% of the initial thymine loss, are thymine di-adducts of a type not previously reported. Preliminary characterization of these novel photoproducts, based on their UV absorption, mass spectra, and proton and carbon-13 nuclear magnetic resonance spectra, suggests that in each of the three, the thymine moieties are linked by an N(1)-C(5) or N(1)-C(6) bond. A thymine cation radical is implicated as the common precursor of all 9 products. Accordingly. pyrimidine photosensitization by 2-methyl-1,4-naphthoquinone serves as a model system for studying the chemical consequences of radiation-induced ionization of the DNA bases.     

Stereochemistry of the asymmetric reduction of (1′s)-1,3-dimethyl-4(1′-phenylethylimino)piperidine

The stereochemistry of the asymmetric reduction of the imine obtained from 1,3-dimethylpiperidin-4-one and (S)--phenylethylamine has been studied. It is shown that hydride reduction of imine 1 by sodium borohydride in methanol is asymmetric and gives the cis and trans diastereomeric pair 1,3-dimethyl-4-(-phenyl-ethylamino) piperidine in the ratio 3:1. Using sodium in isopropanol gives only one trans diastereomeric pair.¹H NMR has been used to identify the stereochemical structure and diastereomer excess of the cis and trans isomers of 1,3-dimethyl-4-(-phenylethylamino)piperidine which had been separated by column chromatography.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 2, pp. 219–221, February, 1996.     

Thermal opening of the diaziridine fragment in 1-methyl-and 1,3,3-trimethyl-1,3,4,8b-tetrahydro-[1,2]diazirino[3,1-<Emphasis Type="Italic">a</Emphasis>]isoquinolines in the presence of n-arylmaleimides

The thermal opening of the diaziridine ring in 1-methyl-and 1,3,3-trimethyl-1,3,4,8b-tetra-hydro[1,2]diazirino[3,1-a]isoquinolines in the presence of N-arylmaleimides leads to the predominant or exclusive formation of the trans isomers of the products of 1,3-dipolar cycloaddition. In the absence of dipolarophile, the conversion of the starting diaziridines is incomplete over the same time period, while the thermolysis products are N-[3,4-dihydro-2(1H)-isoquinolyl]-and N-[3,3-dimethyl-3,4-di-hydro-2(1H)-isoquinolyl]-N-methyleneamines formed as the result of isomerization of intermediate labile azomethineimines. Dedicated to the memory of A. A. Potekhin. __________ Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 7, pp. 1071–1079, July, 2008.     

C,O-dialkylation of Meldrum's acid: synthesis and reactivity of 1,3,7,7-tetramethyl-4H,10H-6,8,9-trioxa-2-thiabenz[f]azulen-5-one

Reaction of Meldrum's acid with 3,4-bis(chloromethyl)-2,5-dimethylthiophene (1) or 3,4-bis(bromomethyl)-2,5-dimethylthiophene (2) produces the kinetically favored C,O-dialkylation product, 1,3,7,7-tetramethyl-4H,10H-6,8,9-trioxa-2-thiabenz[f]azulen-5-one (4). Recrystallization of 4 from refluxing methanol results in the methanolysis product 5-(4-methoxymethyl-2,5-dimethylthiophen-3-ylmethyl)-2,2-dimethyl[1,3]dioxane-4,6-dione (5). Attempts to isomerize 4 to the thermodynamically favored C,C-dialkylation product, 1,3-dimethyl-5,6-dihydro-4H-cyclopenta[c]thiophene(2-spiro-5)2,2-dimethyl-4,6-dione (8), result in the formation of 1,3-dimethyl-7,8-dihydro-4H-thieno[3,4-c]oxepin-6-one (6). The transformation occurs via a retro-Diels-Alder elimination of acetone followed by hydrolysis and decarboxylation of the resulting ketene. The ketene is trapped by tert-butyl alcohol, furnishing 1,3-dimethyl-6-oxo-7,8-dihydro-4H,6H-thieno[3,4-c]oxepine-7-carboxylic acid tert-butyl ester (7). All compounds are characterized spectroscopically as well as by X-ray crystallography of products 4-7.     

Pyrimidines-19: Ring transformation of 5-nitrouracil into nitroresorcinols

The first intermolecular right transformation of a uracil derivative into the benzene system is reported. Treatment of 1,3-dimethyl-5-nitrouracil (1) with acetone in NaOMe/MeOH afforded 6-acetonyl-5,6-dihydro-1,3-dimethyl-5-nitrouracil (6) which was converted into 4-nitroresorcinol (5) upon treatment with NaOEt/EtOH at reflux. Reaction of1 with butanone gave two major products, 3-(5,6-dihydro-1,3-dimethyl-5-nitrouracil-6-yl)butanone (7) and the 1-(uracil-6-yl)butanone isomer (8). Prolonged treatment of7 with NaOEt/EtOH afforded 4-methyl-6-nitro-resorcinol (9) whereas8 was converted into 2-methyl-4-nitro-resorcinol (10). Treatment of1 with diethyl acetonedicar?ylate in NaOEt/EtOH afforded diethyl-2-(5,6-dihydro-1,3-dimethyl-5-nitrouracil-6-yl)-acetonedicar?ylate (2). Prolonged treatment of2 with NaOEt/EtOH at reflux afforded (5,6-dihydro-1,3-dimethyl-6-nitrouracil-6-yl)-acetate (3). Apparently,2 underwent a retroClaisen reaction to give3. Reaction of1 with ethyl acetoacetate in NaOEt/EtOH gave adduct isomers4 which underwent transformation reaction to give eventually 6-nitroresorcinol (5).     

Unexpected course of rearrangement of substituted S-(1(3H)-isobenzofuranone-3-yl)isothiuronium bromides

Three series of S-(1(3H)-isobenzofuranone-3-yl)isothiuronium bromides differing in substitution at the isothiuronium moiety (none, one or two methyl groups) and at the benzene ring were prepared and characterized. These salts were then treated with various bases (acetate, triethylamine, Na₂CO₃) to give either 1-hydroxy-3-oxo-1,3-dihydro-2H-isoindol-2-carbothioamides or the product of S to N isobenzofuranone-3-yl migration, i.e., 1,3-dimethyl-1-(3-oxo-1,3-dihydro-2-benzofuran-1-yl)thioureas. If ammonia was used in reaction with N,N′-dimethyl isothiuronium salts then 3-hydroxy-2,3-dihydro-1H-isoindol-1-ones were formed together with 1,3-dimethyl-1-(3-oxo-1,3-dihydro-2-benzofuran-1-yl)thioureas in parallel reaction with the yields increasing with ammonia concentration. The formation of isoindolones takes place in two steps with an aldehyde intermediate, which can be trapped with N,N-dimethylhydrazine.