Vibrational spectra of 2-biphenylmethanol. Spectrum simulation and molecular structure

The vibrational spectra of a solid crystalline sample of 2-biphenylmethanol have been measured at room temperature. The IR absorption spectra were recorded in the range 400 cm^–1–3600 cm^–1; Raman spectra were measured in the range 10 cm^–1–1640 cm^–1. The direct mechanical and optoelectronic problems were solved using the fragment method realized as Lev-100 software; the intensity distribution in the IR spectrum of 2-biphenylmethanol was obtained by the same method. The experimental Raman and IR absorption spectra were interpreted by analyzing the calculated data on the frequencies and forms of normal vibrations and their intensities in the IR spectra. IR absorption spectra were simulated for several models of 2-biphenylmethanol conformers that differ in the mutual orientation of fragments. Based on the results of simulation and comparison of the calculated and experimental spectra of conformers we suggested a model for the conformer realized in the solid phase under normal conditions.Original Russian Text Copyright © 2004 by L. M. Babkov, J. Baran, N. A. Davydova, J. I. Kukielskii, and S. V. TrukhachevTranslated from Zhurnal Strukturnoi Khimii, Vol. 45, No. 4, pp. 624–631, July–August, 2004.This revised version was published online in April 2005 with a corrected cover date.     

IR-analysis of H-bonded H2O on the pure TiO2 surface

The surface state of optically pure polydisperse TiO₂ (anatase and rutile) was determined by infra-red (IR) spectroscopy analysis in the temperature range of 100–453 K. Anatase A300 spectrum, contrary to rutile R300 one, has a broad three-component absorption band with peaks at 1048, 1137 and 1222 cm⁻¹ in the spectral range of δ(Ti–O–H) deformation vibrations. For rutile R300 we observed a very weak band at 1047 cm⁻¹, and for the thermal treated rutile R900 these bands were not appeared at all. The analysis of temperature dependencies for the mentioned absorption bands revealed the spectral shift of 1222 cm⁻¹ band towards the high frequencies, when the temperature increased, but the spectral parameters of 1137 and 1048 cm⁻¹ bands remained the same. The temperature of 1222 cm⁻¹ band maximum shift was 373–393 K and correlated with DSC data. Obtained results allowed to assign 1222 cm⁻¹ band to the deformation vibrations of OH-groups, bounded to the surface adsorbed water molecules by weak hydrogen bonds (5 kcal/mol). During the temperature growth these molecules desorbed, which also resulted in the intensity decreasing of stretching OH-groups vibration IR-bands at 3420 cm⁻¹. The destruction and desorption of surface water complexes led to Ti–O–H bond strengthening. IR bands at 1137 and 1048 cm⁻¹ were attributed to the stronger bounded adsorbed water molecules, which are also characterized with stretching OH-groups vibration bands at 3200 cm⁻¹. These surface structure were additionally stabilized by hydrogen bonds with the neighbouring TiO₂ lattice anions and other OH-groups, and desorbed at higher temperatures.     

Calculations of silicooxygen ring vibration frequencies

In the work model calculations of the vibrations of ideally isolated silicooxygen rings (using PM3 method) have been carried out. three-, four-, and six-membered rings have been considered. It has been found that that the three-membered silicooxygen rings are flat and practically undeformed showing D_3h symmetry. The rings of higher number of ring members (i.e. n>3) are deformed to some extent. The deformation reveals itself most significantly in the Si–O–Si bond angles distribution. In the case of all the rings the bridging Si–O–Si bonds are ca. 0.02–0.04 Å shorter than the non-bridging Si–O⁻ bonds. Hypothetical IR spectra for all the rings considered have been also calculated. Analysis of these hypothetical spectra leads to the conclusion that the whole spectrum can be divided into four wavenumbers regions, 1200–1100 cm⁻¹ stretching Si–O(Si) vibrations; 1000–800 cm⁻¹ stretching Si–O⁻ vibrations; 800–600 cm⁻¹; the region in which a band characteristic of silicooxygen rings appears, and below 600 cm⁻¹ bending ⁻O–Si–O⁻ and (Si)O–Si–O(Si). It has been also found that as the number of ring members increases the ‘ring band’ shifts to lower wavenumbers: 725 cm⁻¹ for three-membered rings, 650 cm⁻¹ for four-membered rings and 610 cm⁻¹ for six-membered rings. Calculated spectra have been compared with the experimental spectra of cyclosilicates. They showed good agreement in the 1200–600 cm⁻¹ region. In the experimental spectra as well as in the calculated ones, with increasing the number of ring members the ‘ring band’ shifts towards lower wavenumbers.     

The IINS/quantum chemical studies of 17α- and 21-hydroxy-derivatives of progesterone

The inelastic incoherent neutron scattering and quantum chemical studies have been performed on 17 and 21 hydroxy progesterone and the assignment of internal modes have been proposed in the range up to 700 cm⁻¹. The lattice branch of PDS reveals modes which could be attributed to torsions of rings A and D (cyclohexane and cyclopentane) of the pregnane skeleton. An assignment of the torsional vibrations of methyl groups in the range 150–300 cm⁻¹ and the deformation and out-of plane vibrations of CCOH groups has been proposed. An analysis of the effect of hydrogen bonds on PDS spectra has been performed.     

Redox features of β-VOPO4 catalyst using tracer and laser Raman spectroscopy

The oxygen ions of the β-VOPO₄ catalyst were exchanged with an tracer by a reduction–oxidation method and by a catalytic oxidation of but-1-ene using ₂. The bands at 992 and 900 cm⁻¹ were more shifted to lower frequencies than those at 1076 and 1002 cm⁻¹. Applying the correlation between the Raman bands and stretching vibrations in the literature, the exchanged oxygen species were estimated. The results suggest that the P–O–V vacancies corresponding to 992 and 900 cm⁻¹ were responsible for reoxidation and the V=O oxygen corresponding to the 1002 cm⁻¹ band of β-VOPO₄ was not. The (VO)₂P₂O₇ was oxidized to β-VOPO₄ by O₂ above 823 K. The insertion position of oxygen was determined at the bands at 992 and 900 cm⁻¹ of β-VOPO₄ using ₂, which is the same as the exchanged position.     

IR spectroscopic study of the conformational lability of 4′-ethyl-4-cyanobiphenyl

The conformational lability of 4-ethyl-4-cyanobiphenyl molecules in solid crystal (SC) and isotropic liquid (IL) states was investigated by IR spectroscopic techniques (experiment and theory). IR absorption spectra were measured at 28°C–95°C in the frequency range 400 cm^–1–4000 cm^–1. Spectrum simulation was performed using the fragment method with allowance for the conformational fluctuations of molecules. The experimental and calculated spectra were compared and analyzed, and it was shown that in the IL, the samples are mixtures of conformers. The temperature changes in the spectra in the stated range are caused by the conformational lability of molecules.Original Russian Text Copyright © 2004 by L. M. Babkov, I. I. Gnatyuk, G. A. Puchkovskaya, and S. V. TrukhachevTranslated from Zhurnal Strukturnoi Khimii, Vol. 45, No. 3, pp. 398–405, May–June, 2004.     

Differentiation and quality estimation of Cordyceps with infrared spectroscopy

Heretofore, a scientific and systemic method for differentiation and quality estimation of a well-known Chinese traditional medicine, ‘Cordyceps’, has not been established in modern market. In this paper, Fourier-transform infrared spectroscopy (FTIR) and two-dimensional correlation infrared spectroscopy (2D-IR) are employed to propose a method for analysis of Cordyceps. It has presented that IR spectra of real Cordyceps of different origins and counterfeits have their own macroscopic fingerprints, with discriminated shapes, positions and intensities. Their secondary derivative spectra can amplify the differences and confirm the potentially characteristic IR absorption bands 1400–1700 cm⁻¹ to be investigated in 2D-IR. Many characteristic fingerprints are discovered in 2D-IR spectra in the range of 1400–1700 cm⁻¹ and hetero 2D spectra of 670–780 cm⁻¹ × 1400–1700 cm⁻¹. The different fingerprints display different chemical constitutes. Through the three steps, different Cordyceps and their counterfeits can be discriminated effectively and their qualities distinctly display. Successful analysis of eight Cordyceps capsule products has proved the practicability of the method, which can also be applied to the quality estimation of other Chinese traditional medicines.     

A novel series of sulphur-bridged ruthenium-molybdenum complexes: [(RaaiR′)<Subscript>2</Subscript> Ru(μ-S)<Subscript>2</Subscript>Mo(OH)<Subscript>2</Subscript>]. Synthesis,spectroscopic and electrochemical characterization. RaaiR′=1-alkyl-2-(arylazo) imidazole

The reaction of ctc-[Ru(RaaiR′)₂Cl₂] (1) [RaaiR′ = 1-alkyl-2-(arylazo)imidazole, p-R-C₆H₄-N=N-C₃H₂NN(1)-R′, R = H (a), Me (b), Cl (c), R′ = Me (2), Et (3), Bz (4)] with (NH₄)₂MoS₄ in aqueous MeOH afforded red-violet mixed ligand complexes of the type [(RaaiR′)₂Ru(μ-S)₂Mo(OH)₂] (2–4). In complexes (2–4) the terminal Mo=S bonds of the MoS₄²⁻ unit become hydroxylated and the molybdenum ion is reduced from the starting Mo^VI in MoS₄²⁻ to Mo^IV in the final product (2–4). The solution electronic spectra exhibit a strong MLCT band at 550–570 nm in DCM. Cyclic voltammograms show a Ru(III)/Ru(II) couple at 1.10–1.4 V, irreversible Mo(IV)/Mo(V) oxidations in the 1.66–1.72 V range, along with four successive reversible ligand reductions in the range −0.45–0.67 V (one electron), −0.82–1.12 V (one electron), and −1.44–1.90 V (simultaneously two electrons).     

Vibrational interactions in dimethylgold(III) halides and carboxylates

The far-infrared and Raman spectra of binuclear molecules [Me₂AuX]₂ (X = Cl, Br, I) and [Me₂Au(OOCR)]₂ (R = Me, CF₃, Bu^t, Ph) in the 600–70 cm⁻¹ region are reported. The experimentally measured vibrational frequencies of [Me₂AuX]₂ are in a good agreement with density functional theory predictions. The Au…Au vibrational interactions predicted to be in the 270–60 cm⁻¹ region of [Me₂AuX]₂ far-IR and Raman spectra have been observed. The Raman-active Au…Au vibrations of the [Me₂Au(OOCR)]₂ molecules were found to be in the same region as those of [Me₂AuX]₂. The Au–X stretching modes were observed between 100 and 250 cm⁻¹ in accordance with the DFT predictions. Their frequencies in the IR spectra of [Me₂AuX]₂ increase in the sequence I < Br < Cl while the AuC₂ stretching frequencies decrease in the same order. This fact might be an evidence of the decreasing covalent character of the gold-halogen bridges. The Au–O stretching bands of dimethylgold(III) carboxylates have been observed in the 500–250 cm⁻¹ region, and Au–C stretching frequencies of both [Me₂AuX]₂ and [Me₂Au(OOCR)]₂ compounds have been found between 600 and 500 cm⁻¹.     

Vibrational spectra and structure of caprolactamates of group II metals

Differences between the IR and Raman spectra of the dicaprolactamates of Mg, Ca, and Ba indicate differences in their structures. Barium dicaprolactamate has an ionic structure, while the dicaprolactamates of Mg and Ca are partially covalent and have one-dimensional chain structures with various types of NCO group (terminal, bridge). In solution the dicaprolactamates of Mg and Ca are associated on account of the formation of bridged NCO groups. It was shown that the vibration frequencies of the bridged NCO groups lie in the range 1580–1620 cm^–1, and those of the terminal groups in the range 1550–1580 cm^–1.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 7, pp. 1570–1573, July, 1990.     

IR study of the peculiarities of the stabilization of the NH4Na-Y zeolite structure during its hydrothermal dealumination

The variations in the structure of deep-level calcinated NH₄Na-Y zeolite (68 % NH₄ ⁺, Si/Al = 2.56) at 873 K (stage I of the hydrothermal dealumination) as a result of ammonation and subsequent calcination in water vapor at 973 and 1023 K (stageII) were studied using the IR spectra of zeolite framework vibrations. It was shown that ammonation of the product of stageI promotes the formation of linear disiloxane bonds and extra-framework =Al^VI-OH species identified by absorption at 482, 1196 cm^–1, and 524, 612, 829 cm^–1. The ammonation is also accompanied by an increase in the excessive negative framework charge (ENFC), which is manifested in the high-frequency (HF) shift of the bands that have maxima in thev _as (TO₄) region and equals 10 cm^–1, and also by a decrease in the unit cell parameter (a ₀) by 0.14 Å. The decrease in both the ENFC anda ₀ for the products of stageII, v _as (TO₄) = 10–20 cm^–1 and a ₀ = 0.07–0.14 Å, is due to the formation of nonlinear disiloxane bonds and non-framework aluminum hydroxide species identified by the absorption bands at 478, 1173 cm^–1 and 530, 615, 835 cm^–1.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 4, pp. 660–664, April, 1993.     

IR spectroscopic study of adsorption of ammmonia on Brønsted acid centers of a fluorinated surface of silica

The adsorption of aqueous ammonia solution vapor on a fluorinated surface of aerosil was studied by IR spectroscopy. The adsorption of NH₃ is accompanied by the appearance of absorption bands at 740, 1450, and 3330 cm^–1 in the IR spectra. The surface compounds were identified from the results of a study on the thermal degradation of adsorbed complexes and an analysis of literature data. The IR absorption bands at 1450 and 3330 cm^–1 correspond to deformational and stretching vibrations of the N-H bonds of the ammonium cation, The 740 cm^–1 band was assigned to the vibrations of the Si-F bonds in the complex anion, containing a fragment of SiO₂ surface, a fluorine atom, a hydroxyl group and a molecule of water. In this surface-coordinated compound, the silicon atom has a coordination number of six.Translated from Teoreticheskaya i Éksperimental'naya Khimiya, Vol. 22, No. 6, pp. 747–751, November–December, 1986.     

Comparative study of the spectroscopic properties of Cr-doped LiAlO2 and LiGaO2

A detailed spectroscopic study of the optical characteristics of the tetrahedrally coordinated Cr⁴⁺ ion in LiAlO₂ and LiGaO₂ is given. From absorption and excitation measurements the crystal field parameter Dq and the Racah parameter B were determined to be Dq=1065 cm⁻¹, B=450 cm⁻¹, and Dq/B=2.4 for LiAlO₂ and Dq=1055 cm⁻¹, B=428 cm⁻¹, and Dq/B=2.5 for LiGaO₂. For the Racah parameter C only a lower limit can be given, i.e. 2417 cm⁻¹ for LiAlO₂ and 2667 cm⁻¹ for LiGaO₂. Due to the strong crystal field splitting — caused by the low site symmetry — the ³B(³T₂) crystal field component is the metastable and thus the emitting level. In the low-temperature absorption and emission spectra the expected three spin–orbit components of the ³B level are found at 8273, 8296, and 8300 cm⁻¹ for Cr⁴⁺:LiAlO₂ and 8610, 8623, and 8632 cm⁻¹ for Cr⁴⁺:LiGaO₂. The emission lifetime of Cr⁴⁺ in LiAlO₂ is 95 μs at 10 K and single exponential. In Mg-codoped LiAlO₂ and in LiGaO₂ the Cr⁴⁺ decay is double exponential. In Cr,Mg:LiAlO₂ two centers can be clearly distinguished, while in Cr:LiGaO₂ a variety of centers are observed, probably due to different charge compensation processes between Li, Ga, and Cr. The quantum efficiencies at room temperature are 42% for Cr:LiAlO₂ and 23% for Cr:LiGaO₂. Already at low temperature nonradiative decay processes occur. The temperature dependence of the lifetimes were analyzed with the model of Struck and Fonger. Excited state absorption measurements indicate that in the spectral region of the emission the excited state absorption cross-section is larger than the stimulated emission cross-section. Therefore laser oscillation is unlikely in these systems.     

Vibrational spectroscopic study of the arsenate mineral strashimirite Cu8(AsO4)4(OH)4·5H2O—Relationship to other basic copper arsenates

The basic copper arsenate mineral strashimirite Cu₈(AsO₄)₄(OH)₄·5H₂O from two different localities has been studied by Raman spectroscopy and complemented by infrared spectroscopy. Two strashimirite mineral samples were obtained from the Czech (sample A) and Slovak (sample B) Republics. Two Raman bands for sample A are identified at 839 and 856 cm⁻¹ and for sample B at 843 and 891 cm⁻¹ are assigned to the ν₁ (AsO₄³⁻) symmetric and the ν₃ (AsO₄³⁻) antisymmetric stretching modes, respectively. The broad band for sample A centred upon 500 cm⁻¹, resolved into component bands at 467, 497, 526 and 554 cm⁻¹ and for sample B at 507 and 560 cm⁻¹ include bands which are attributable to the ν₄ (AsO₄³⁻) bending mode. In the Raman spectra, two bands (sample A) at 337 and 393 cm⁻¹ and at 343 and 374 cm⁻¹ for sample B are attributed to the ν₂ (AsO₄³⁻) bending mode. The Raman spectrum of strashimirite sample A shows three resolved bands at 3450, 3488 and 3585 cm⁻¹. The first two bands are attributed to water stretching vibrations whereas the band at 3585 cm⁻¹ to OH stretching vibrations of the hydroxyl units. Two bands (3497 and 3444 cm⁻¹) are observed in the Raman spectrum of B. A comparison is made of the Raman spectrum of strashimirite with the Raman spectra of other selected basic copper arsenates including olivenite, cornwallite, cornubite and clinoclase.     

Calorimetric and IR-spectroscopic study of adsorption of methanol on zeolite-like aluminophosphates

Electrostatic properties of zeolite-like aluminophosphates are intermediate between those of zeolites and zeolite-like silica modifications. The adsorption measurements and IR spectroscopic investigations of the framework vibrations demonstrate that the number of the adsorption complexes of CH₃OH with Al atoms increases in the following order: AlPO₄-5 < AlPO₄-17 AlPO₄-18.The OH vibrations of methanol molecules in the first coordination sphere of the Al atoms are reflected in the IR spectra as an absorption band at 3200 cm^–1, which is not observed for the adsorption of CH₃OH on zeolites.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 10, pp. 1937–1942, October, 1995.     

Diffuse reflectance spectra of iron(III) vanadates

The electronic spectra of solid iron(III) vanadates FeVO₄ and Fe₂V₄O₁₃ were investigated by the diffuse reflectance technique in the spectral range 12 500–50 000 cm⁻¹. The spectra of investigated vanadates contain 2–3 intensive CT bands in the UV region and two lowest energy d–d bands in the 12 000–22 000 cm⁻¹ range. The presence of the weak bands for FeVO₄ and Fe₂V₄O₁₃ at 16 500 cm⁻¹ and 20 500 cm⁻¹ points to the lattice deffects (oxygen deficiency and the presence of the V⁴⁺ ions) in the structure of investigated vanadates.     

Infrared spectra of cyclic ethers and their derivatives

The IR spectra of six monosubstituted and of four 2,6-disubstituted 1,4-dioxanes have been studied in the 650–1800cm^–1 region. The assignment of the bands due to the vibrations of the 1,4-dioxane ring and to the deformation vibrations of the methylene groups of the ring is given. The appearance of a whole series of new absorption bands on passing from unsubstituted 1,4-dioxane to its derivatives is explained by the change in the symmetry of the molecule and the removal of the prohibition from the vibrations previously inactive in the IR spectra connected with this reduction in symmetry. It is proposed to use, in order to confirm the presence of a 1,4-dioxane ring in a molecule from the results of IR spectroscopy, not only the 1126-cm^–1 band but the whole group of bands lying in the frequency ranges 800–950, 1000–1150, and 1200–1300 cm^–1.For part I, see [3].     

Investigation of silicate mineral sanidine by vibrational and NMR spectroscopic methods

Sanidine, a variety of feldspar minerals has been investigated through optical absorption, vibrational (IR and Raman), EPR and NMR spectroscopic techniques. The principal reflections occurring at the d-spacings, 3.2892, 3.2431, 2.9022 and 2.6041 Å confirm the presence of sanidine structure in the mineral. Sanidine shows five prominent characteristic infrared absorption bands in the region 1200–950, 770–720, 590–540 and 650–640 cm⁻¹. The Raman spectrum shows the strongest band at 512 cm⁻¹ characteristic of the feldspar structure, which contains four membered rings of tetrahedra. The UV–vis–NIR absorption spectrum had strong absorption features at 6757, 5780 and 5181 cm⁻¹ due to the combination of fundamental OH– stretching. The bands at 11236 and 8196 cm⁻¹and the strong, well-defined band at (30303 cm⁻¹ attest the presence of Fe²⁺ and Fe³⁺, respectively, in the sample. The signals at g = 4.3 and 3.7 are interpreted in terms of Fe³⁺ at two distinct tetrahedral positions Tl and T2 of the monoclinic crystal structure The ²⁹Si NMR spectrum shows two peaks at −97 and −101 ppm corresponding to T2 and T1, respectively, and one peak in ²⁷Al NMR for Al(IV).     

Characteristic frequencies in the infrared spectra of pyrazolines

Pyrazolines are characterized by valence vibrations at the following frequencies: C=N (1580–1627 cm^–1), H-C³=N (3040–3063 cm^–1), H-N (3270–3305 cm^–1) and CH₃-N (2780–2805 cm^–1). Lowering of the frequencies of the valence vibrations of C=N in pyrazolines, when compared with the magnitudes characteristic of alkyledene amines and oximes, is regarded as a consequence of coupling with the unshared electron pair of the neighboring nitrogen atom. By means of the IR spectra, it is possible to determine the position of the double bonds in the pyrazoline ring, to distinguish between pyrazolines substituted and nonsubstituted in positions 1 and 3, and to establish the presence of geminate (twin) methyl groups and methyl groups in position 1.     

Infrared spectroscopy of isolated nucleotides. 1. The cyclic 3′,5′-adenosine monophosphate anion

The intracellular second messenger deprotonated adenosine 3′,5′-cyclic monophosphate anion (cAMP-H)⁻, generated as gaseous species by electrospray ionization (ESI) and stored in a Paul ion-trap mass spectrometer, has been investigated by mass-resolved infrared multiple photon dissociation (IRMPD) spectroscopy in the 900–1800 cm⁻¹ fingerprint wavenumber range, exploiting the powerful and continuously tunable radiation from a free electron laser (FEL) at the Centre Laser Infrarouge d’Orsay (CLIO). The IRMPD features are interpreted by comparison with the IR spectra obtained by quantum chemical calculations for different low-lying conformers, allowing an assignment for the observed IRMPD bands. It is to be noted that the calculated IR spectra for the most stable conformers look all rather similar and do not allow an unambiguous structural assignment, based exclusively on the IRMPD spectrum. However, the positions and intensities of the IRMPD features of isolated (cAMP-H)⁻ ions are consistent with a species deprotonated at the phosphate group and compatible with the main equilibrium structures lying within 18 kJ mol⁻¹ from the lowest lying conformation, the anti-chair form with a C3′-endo sugar twist.