A Two-Armed Probe for In-Cell DEER Measurements on Proteins**

The application of double electron-electron resonance (DEER) with site-directed spin labeling (SDSL) to measure distances in proteins and protein complexes in living cells puts rigorous restraints on the spin-label. The linkage and paramagnetic centers need to resist the reducing conditions of the cell. Rigid attachment of the probe to the protein improves precision of the measured distances. Here, three two-armed Gd^III complexes, Gd^III-CLaNP13a/b/c were synthesized. Rather than the disulfide linkage of most other CLaNP molecules, a thioether linkage was used to avoid reductive dissociation of the linker. The doubly Gd^III labeled N55C/V57C/K147C/T151C variants of T4Lysozyme were measured by 95 GHz DEER. The constructs were measured in vitro, in cell lysate and in Dictyostelium discoideum cells. Measured distances were 4.5 nm, consistent with results from paramagnetic NMR. A narrow distance distribution and typical modulation depth, also in cell, indicate complete and durable labeling and probe rigidity due to the dual attachment sites.     

Erythrosin B as a New Photoswitchable Spin Label for Light-Induced Pulsed EPR Dipolar Spectroscopy

We present a new photoswitchable spin label for light-induced pulsed electron paramagnetic resonance dipolar spectroscopy (LiPDS), the photoexcited triplet state of erythrosin B (EB), which is ideal for biological applications. With this label, we perform an in-depth study of the orientational effects in dipolar traces acquired using the refocused laser-induced magnetic dipole technique to obtain information on the distance and relative orientation between the EB and nitroxide labels in a rigid model peptide, in good agreement with density functional theory predictions. Additionally, we show that these orientational effects can be averaged to enable an orientation-independent analysis to determine the distance distribution. Furthermore, we demonstrate the feasibility of these experiments above liquid nitrogen temperatures, removing the need for expensive liquid helium or cryogen-free cryostats. The variety of choices in photoswitchable spin labels and the affordability of the experiments are critical for LiPDS to become a widespread methodology in structural biology.     

Field‐Induced Slow Magnetic Relaxation in a Mononuclear Manganese(III)–Porphyrin Complex

We report on a novel manganese(III)–porphyrin complex with the formula [Mn^III(TPP)(3,5‐Me₂pyNO)₂]ClO₄?CH₃CN ( 2 ; 3,5‐Me₂pyNO=3,5‐dimethylpyridine N‐oxide, H₂TPP=5,10,15,20‐tetraphenylporphyrin), in which the Mn^III ion is six‐coordinate with two monodentate 3,5‐Me₂pyNO molecules and a tetradentate TPP ligand to build a tetragonally elongated octahedral geometry. The environment in 2 is responsible for the large and negative axial zero‐field splitting (D=?3.8 cm^?1), low rhombicity (E/|D|=0.04) of the high‐spin Mn^III ion, and, ultimately, for the observation of slow magnetic‐relaxation effects (E_a=15.5 cm^?1 at H=1000 G) in this rare example of a manganese‐based single‐ion magnet (SIM). Structural, magnetic, and electronic characterizations were carried out by means of single‐crystal diffraction studies, variable‐temperature direct‐ and alternating‐current measurements and high‐frequency and ‐field EPR spectroscopic analysis followed by quantum‐chemical calculations. Slow magnetic‐relaxation effects were also observed in the already known analogous compound [Mn^III(TPP)Cl] ( 1 ; E_a=10.5 cm^?1 at H=1000 G). The results obtained for 1 and 2 are compared and discussed herein.     

Manganese(I)‐Catalyzed C–H Aminocarbonylation of Heteroarenes

A versatile manganese(I) catalyst was employed in C? H aminocarbonylation reactions of heteroarenes with aryl as well as with alkyl isocyanates using a removable directing group approach. Detailed experimental mechanistic studies were suggestive of an organometallic C? H manganesation step, followed by a rate‐determining migratory insertion.     

Pulsed‐EPR Evidence of a Manganese(II) Hydroxycarbonyl Intermediate in the Electrocatalytic Reduction of Carbon Dioxide by a Manganese Bipyridyl Derivative

A key intermediate in the electroconversion of carbon dioxide to carbon monoxide, catalyzed by a manganese tris(carbonyl) complex, is characterized. Different catalytic pathways and their potential reaction mechanisms are investigated using a large range of experimental and computational techniques. Sophisticated spectroscopic methods including UV/Vis absorption and pulsed‐EPR techniques (2P‐ESEEM and HYSCORE) were combined together with DFT calculations to successfully identify a key intermediate in the catalytic cycle of CO₂ reduction. The results directly show the formation of a metal–carboxylic acid–CO₂ adduct after oxidative addition of CO₂ and H⁺ to a Mn⁰ carbonyl dimer, an unexpected intermediate.     

Turn‐On Fluorescence and Unprecedented Encapsulation of Large Aromatic Molecules within a Manganese(II)–Triazole Metal–Organic Confined Space

For the purpose of investigating the coordination behavior of sterically congested alkenes and exploring the possibility of cofacial complexation in the polycyclic aromatic system for the formation of extended polymeric networks, a new tetradentate ligand, 1,1,2,2‐tetrakis[4‐(1H‐1,2,4‐triazol‐1‐yl)phenyl]ethylene (TTPE), has been designed and synthesized. By using TTPE as a building block with regard to the self‐assembly with MnCl₂ ? 4 H₂O, a novel two‐dimensional coordination framework {[Mn(TTPE)Cl₂] ? 4 CHCl₃}_n ( 1 ) can be isolated. Anion‐exchange and organic‐group‐functionalized aromatic guest TTPE‐loaded host–guest complex experimental results indicate that coordinated Cl^? anions in the 2D framework of 1 can be completely replaced with dissociative ClO₄^? groups in an irreversible single‐crystal‐to‐single‐crystal transformation fashion, as evidenced by the anion‐exchange products of {[Mn(TTPE)(H₂O)₂](ClO₄)₂ ? 0.5 TTPE ? 5.25 H₂O}_n ( 2 ). Interestingly, TTPE, acting as an organic template, was encapsulated in the confined space of the 2D grid of 2 . To the best of our knowledge, such large organic molecules encapsulated in the reactive organic‐group‐functionalized aromatic‐guest‐loaded host–guest complex are unprecedented up to now. Luminescence measurements illustrate that 1 and 2 represent novel examples of sensing materials based on triazole derivatives. Further, 2 has been demonstrated by tuning the fluorescence response of porous metal–organic frameworks as a function of adsorbed small analytes.     

Synthesis and Magnetic Properties of (Pyrrolidin‐1‐oxyl)–(Nitronyl Nitroxide)/(Iminonitroxide)‐Dyads

Unlike extensively studied diradicals linked by π‐conjugated systems, only a few studies have investigated weakly coupled diradicals linked by an sp³ carbon atom. Herein, we prepared pyrrolidin‐1‐oxyl–(nitronyl nitroxide)‐dyad 5 and pyrrolidin‐1‐oxyl–iminonitroxide‐dyad 6 . From the observed temperature dependence of the magnetic susceptibility, 5 and 6 were determined to be in singlet ground states with 2J_intra/k_B=?35.2 K and ?13.6 K, respectively. From these results and theoretical calculations of related diradicals, the spin‐polarization model counting the small spin density of the sp³ carbon atom could be used as a spin‐prediction model.     

Spin‐Labeled Heparins as Polarizing Agents for Dynamic Nuclear Polarization

A potentially biocompatible class of spin‐labeled macromolecules, spin‐labeled (SL) heparins, and their use as nuclear magnetic resonance (NMR) signal enhancers are introduced. The signal enhancement is achieved through Overhauser‐type dynamic nuclear polarization (DNP). All presented SL‐heparins show high ¹H DNP enhancement factors up to E=?110, which validates that effectively more than one hyperfine line can be saturated even for spin‐labeled polarizing agents. The parameters for the Overhauser‐type DNP are determined and discussed. A striking result is that for spin‐labeled heparins, the off‐resonant electron paramagnetic resonance (EPR) hyperfine lines contribute a non‐negligible part to the total saturation, even in the absence of Heisenberg spin exchange (HSE) and electron spin‐nuclear spin relaxation (T_1ne). As a result, we conclude that one can optimize the use of, for example, biomacromolecules for DNP, for which only small sample amounts are available, by using heterogeneously distributed radicals attached to the molecule.     

Cerium(IV)‐Driven Water Oxidation Catalyzed by a Manganese(V)–Nitrido Complex

The study of manganese complexes as water‐oxidation catalysts (WOCs) is of great interest because they can serve as models for the oxygen‐evolving complex of photosystem II. In most of the reported Mn‐based WOCs, manganese exists in the oxidation states III or IV, and the catalysts generally give low turnovers, especially with one‐electron oxidants such as Ce^IV. Now, a different class of Mn‐based catalysts, namely manganese(V)–nitrido complexes, were explored. The complex [Mn^V(N)(CN)₄]²⁻ turned out to be an active homogeneous WOC using (NH₄)₂[Ce(NO₃)₆] as the terminal oxidant, with a turnover number of higher than 180 and a maximum turnover frequency of 6 min⁻¹. The study suggests that active WOCs may be constructed based on the Mn^V(N) platform.     

Site‐Directed Spin‐Labeling of DNA by the Azide–Alkyne ‘Click’ Reaction: Nanometer Distance Measurements on 7‐Deaza‐2′‐deoxyadenosine and 2′‐Deoxyuridine Nitroxide Conjugates Spatially Separated or Linked to a ‘dA‐dT’ Base Pair

Nucleobase‐directed spin‐labeling by the azide‐alkyne ‘click’ (CuAAC) reaction has been performed for the first time with oligonucleotides. 7‐Deaza‐7‐ethynyl‐2′‐deoxyadenosine ( 1 ) and 5‐ethynyl‐2′‐deoxyuridine ( 2 ) were chosen to incorporate terminal triple bonds into DNA. Oligonucleotides containing 1 or 2 were synthesized on a solid phase and spin labeling with 4‐azido‐2,2,6,6‐tetramethylpiperidine 1‐oxyl (4‐azido‐TEMPO, 3 ) was performed by post‐modification in solution. Two spin labels ( 3 ) were incorporated with high efficiency into the DNA duplex at spatially separated positions or into a ‘dA‐dT’ base pair. Modification at the 5‐position of the pyrimidine base or at the 7‐position of the 7‐deazapurine residue gave steric freedom to the spin label in the major groove of duplex DNA. By applying cw and pulse EPR spectroscopy, very accurate distances between spin labels, within the range of 1–2 nm, were measured. The spin–spin distance was 1.8±0.2 nm for DNA duplex 17 ( dA*^7,10 ) ?11 containing two spin labels that are separated by two nucleotides within one individual strand. A distance of 1.4±0.2 nm was found for the spin‐labeled ‘dA‐dT’ base pair 15 ( dA*⁷ ) ?16 ( dT*⁶ ). The ‘click’ approach has the potential to be applied to all four constituents of DNA, which indicates the universal applicability of the method. New insights into the structural changes of canonical or modified DNA are expected to provide additional information on novel DNA structures, protein interaction, DNA architecture, and synthetic biology.     

Pulse EPR Methods for Studying Chemical and Biological Samples Containing Transition Metals

This review discusses the application of pulse EPR to the characterization of disordered systems, with an emphasis on samples containing transition metals. Electron nuclear double‐resonance (ENDOR), electron‐spin‐echo envelope‐modulation (ESEEM), and double electron–electron resonance (DEER) methodologies are outlined. The theory of field modulation is outlined, and its application is illustrated with DEER experiments. The simulation of powder spectra in EPR is discussed, and strategies for optimization are given. The implementation of this armory of techniques is demonstrated on a rich variety of chemical systems: several porphyrin derivatives that are found in proteins and used as model systems, otherwise highly reactive aminyl radicals stabilized with electron‐rich transition metals, and nitroxide–copper–nitroxide clusters. These examples show that multi‐frequency continuous‐wave (CW) and pulse EPR provides detailed information about disordered systems.     

Synthesis and Spin‐Trapping Properties of a Trifluoromethyl Analogue of DMPO: 5‐Methyl‐5‐trifluoromethyl‐1‐pyrroline N‐Oxide (5‐TFDMPO)

The 5‐diethoxyphosphonyl‐5‐methyl‐1‐pyrroline N‐oxide superoxide spin adduct (DEPMPO?OOH) is much more persistent (about 15 times) than the 5,5‐dimethyl‐1‐pyrroline N‐oxide superoxide spin adduct (DMPO?OOH). The diethoxyphosphonyl group is bulkier than the methyl group and its electron‐withdrawing effect is much stronger. These two factors could play a role in explaining the different half‐lifetimes of DMPO?OOH and DEPMPO?OOH. The trifluoromethyl and the diethoxyphosphonyl groups show similar electron‐withdrawing effects but have different sizes. We have thus synthesized and studied 5‐methyl‐5‐trifluoromethyl‐1‐pyrroline N‐oxide (5‐TFDMPO), a new trifluoromethyl analogue of DMPO, to compare its spin‐trapping performance with those of DMPO and DEPMPO. 5‐TFDMPO was prepared in a five‐step sequence by means of the Zn/AcOH reductive cyclization of 5,5,5‐trifluoro‐4‐methyl‐4‐nitropentanal, and the geometry of the molecule was estimated by using DFT calculations. The spin‐trapping properties were investigated both in toluene and in aqueous buffer solutions for oxygen‐, sulfur‐, and carbon‐centered radicals. All the spin adducts exhibit slightly different fluorine hyperfine coupling constants, thereby suggesting a hindered rotation of the trifluoromethyl group, which was confirmed by variable‐temperature EPR studies and DFT calculations. In phosphate buffer at pH 7.4, the half‐life of 5‐TFDMPO?OOH is about three times shorter than for DEPMPO?OOH and five times longer than for DMPO?OOH. Our results suggest that the stabilization of the superoxide adducts comes from a delicate balance between steric, electronic, and hydrogen‐bonding effects that involve the β group, the hydroperoxyl moiety, and the nitroxide.