Halogen switching of azacarbenes C2NH ground states at ab initio and DFT levels

Relative stabilities and singlet–triplet energy differences are calculated for 24 C₂NX azacarbenes (where X is H, F, Cl, and Br). Three skeletal arrangements are employed including azacyclopropenylidene, [(imino)methylene]carbene, and cyanocarbene. Halogens appear to alternate the electronic ground states of C₂NH azacarbenes, from triplet to singlet states, at MP3/6‐311++G**, B1LYP/6‐311++G**, B3LYP/6‐311++G**, MP2/6‐311++G**, MP4(SDTQ)/6‐311++G**, QCISD(T)/6‐311++G**, CCSD(T)/6‐311++G**, CCSD(T)/cc‐pVTZ, G1, and G2 levels of theory. The aromatic characters of singlet cyclic azacyclopropenylidenes are measured using GIAO–NICS calculations. Linear correlations are found between the B3LYP/6‐311++G** calculated LUMO–HOMO energy gaps (ΔE_{HOMO ‐ LUMO}) of the singlet carbenes versus their corresponding singlet–triplet energy separations (ΔE). Electrophilic characters are found for all singlet azacarbenes in their addition reactions to alkenes with the highest electrophilicity being exhibited for X = F. © 2008 Wiley Periodicals, Inc. Heteroatom Chem 19:377–388, 2008; Published online in Wiley InterScience ( www.interscience.wiley.com ). DOI 10.1002/hc.20442     

Computational Study of the Substitution Effect on the Mechanism for the Gold(I)‐Catalyzed Ring Expansions of Unactivated Alkynylcyclopropanes

The ring expansion reactions of unactivated alkynylcyclopropanes X‐C≡C‐C₃H₅ → X‐C=C₄H₅ (X = H, F, Cl, Me, OMe, NMe₂, CMe₃) were examined using the density functional theory calculations. All of the structures were completely optimized at the B3LYP/6‐311++G** level of theory. For clarify the effect of the cationic gold(I), we also added AuPH₃⁺ as the catalyst into the system and the structures for Au were calculated at the B3LYP/LANL2DZ level of theory. The main finding of this work is that the singlet‐triplet splitting of X‐C≡C‐C₃H₅ play an important role in determining the kinetic and thermodynamic stability of the unactivated ring expansion reactions. When X‐C≡C‐C₃H₅ with a smaller singlet‐triplet splitting is utilized, the reaction has a smaller activation energy and a larger exothermicity.     

Substituent effect on intramolecular hydrogen bonding in 2‐hydroxybenzaldehyde

The effect of some substituents on intramolecular hydrogen bonding of 5‐X‐2‐hydroxybenzaldehyde (5‐X‐2‐HBA) has been studied by B3LYP and MP2 methods using 6‐311++G** and AUG‐cc‐PVTZ basis sets. The relationship between hydrogen bond energy E_HB and electron donation (or withdrawal) of substituents has been investigated. An approximately good linear relationship has been detected between Hammett coefficients and hydrogen bond formation energy (R² = 0.98). Herein, population analysis has been performed by atoms in molecules (AIM) and natural bond orbital (NBO) methods. The results of AIM and NBO analyses are in a good agreement with calculated energy values. Furthermore, correlation between ring aromaticity and hydrogen bonding has been investigated by nucleus‐independent chemical shift (NICS) at GIAO/B3LYP/6‐311++G** level of theory. © 2009 Wiley Periodicals, Inc. Int J Quantum Chem, 2009     

Computational study of tautomerism and aromaticity in mono‐ and dithio‐substituted tropolone

Keto‐enol tautomerism in mono‐ and dithio‐substituted analogs of tropolone was investigated using electronic structure computations. Seven structural isomers of C₇H₆OS and four of C₇H₆S₂ were optimized fully in gas phase at HF and B3LYP theoretical levels in combination with the 6‐311++g** basis set, as well as with the CBS‐QB3 and G3 methods. To examine the effects of an aqueous solvent on tautomeric equilibrium constants, each species was optimized in water using the self‐consistent reaction field polarizable continuum model at HF/6‐311++g** and B3LYP/6‐311++g** model chemistries. In both phases it was found that the enol forms were significantly more stable with respect to electronic energy and Gibbs free energy compared to the keto isomers, and outnumbered the keto species by several orders of magnitude. This was understood on the basis of elementary Hückel theory and the 4n + 2 rule, and supported by nucleus independent chemical shifts computations of NMR chemical shifts in these seven membered cyclic systems. © 2012 Wiley Periodicals, Inc.     

Ab initio study of the ground and excited states of HCP and its isomer HPC

The potential energy surface of HCP converting to HPC in its ground electronic state has been investigated with ab initio methods at levels up to MP2/6-311G**//MP4/6-311G** as well as TZV + + ** CASSCF. All geometries are fully optimized and compare favorably to previous theoretical and experimental values. The HCP molecule is predicted to be 85.4 kcal/mol lower in energy than its linear isomer at the-MP2/6-31G*//MP2/6-31G* level. The energy barrier for hydrogen rearrangement is found to be merely 2.3 kcal from the HPC end. CASSCF studies were initiated to clarify the low barrier and lent support to a flat surface as HPC converts to stable, linear HCP at the TZV + + ** level. CASSCF also predicts that HPC is unstable with respect to bending. Harmonic vibrational frequencies for HCP results in 5% accuracy or better. A bent triplet is found to be the lowest excited state using the CASSCF method. © 1993 John Wiley & Sons, Inc.     

Quantum study on the electrocyclic reactions of CH2CHCHCHX (XH,F, Cl)

The microscopic mechanisms of the electrocyclic reactions for cis‐1,3‐butadiene and its monofluoro‐, monochloroderivatives have been studied by density functional theory (DFT), using the B3LYP method and 6‐311++G** basis sets. We optimized the geometric configurations of reactants, transition states, and products; verified all the probable transition states through vibrational analysis; and calculated the relative single‐point energies at the QCISD(T)/6‐311++G**//B3LYP/6‐311++G**. The results show that the monofluoro‐, monochloroderivatives of cis‐1,3‐butadiene both have two conformers; the reactant favors the electrocyclic reaction when one outboard hydrogen atom of the CH₂ groups is substituted by the fluorine or chlorine atom. © 2004 Wiley Periodicals, Inc. Int J Quantum Chem, 2004     

DFT investigation of sites of protonation of antitumor of 2‐(4‐aminophenyl)benzazoles in the gas phase and in solution

The proton affinity on each of the possible sites in the antitumor 2‐(4‐aminophenyl)benzazoles has been calculated at the B3LYP/6‐311G** level of theory in the gas phase and in solution. The N₃‐site of protonation is found to be strongly favored over the NH₂‐site for the studied compounds both in gas phase and in solution. The stability of N₃‐protonated species is explained by the resonance interaction of the NH₂‐group with the heterocyclic ring. The potential energy surface (PES) for the protonation process was studied at the density functional theory (DFT)/B3LYP/6‐311++G** level of theory. Solvent effects on the PES were also examined using two models: Onsager self‐consistent field and polarizable continuum model (PCM). © 2005 Wiley Periodicals, Inc. Int J Quantum Chem, 2005     

Computational Study of the Substitution Effect on the Mechanism for the Aza‐ and Arsa‐Wittig Reactions

The aza‐ and arsa‐Wittig reactions HM=PH₃ + O=CHX → HM=CHX + O=PH₃ (M = N, As; X = H, F, Cl, Me, OMe, NMe₂, CMe₃) were examined using the density functional theory calculations. All of the structures were completely optimized at the B3LYP/6‐311++G** level of theory. The main finding of this work is that the difference between singlet‐triplet splitting of O=CHX and HM=PH₃ play an important role in determining the kinetic and thermodynamic stability of the aza‐ and arsa‐Wittig reactions. When HM=PH₃ with more ylidic character is utilized, the reaction has a smaller activation energy and a larger exothermicity.     

Anharmonic Effect of the Unimolecular Dissociation of Ethyl Radical

The anharmonic and harmonic rate constants have been calculated for the unimolecular dissociation of ethyl radical using the method proposed by Yao and Lin (YL method) at both B3LYP/6‐311++G** and MP2/6‐311++G** levels. The different rate constants indicate that the results obtained from B3LYP and MP2 method are very close. The anharmonic and tunneling effect of the title reaction has also been examined. The comparison shows that, both in microcanonical and canonical systems, the anharmonic rate constants are higher than those for harmonic cases, especially in the case of high total energies and temperatures, which indicates that anharmonic effect of the unimolecular dissociation of ethyl into C₂H₄ and H is so significant that cannot be neglected. The tunneling effect is very small for the decomposition of C₂H₅ radical.     

Theoretical study on the gas‐phase reaction mechanism between nickel monoxide and methane for syngas production

The comprehensive mechanism survey on the gas‐phase reaction between nickel monoxide and methane for the formation of syngas, formaldehyde, methanol, water, and methyl radical has been investigated on the triplet and singlet state potential energy surfaces at the B3LYP/6‐311++G(3df, 3pd)//B3LYP/6‐311+G(2d, 2p) levels. The computation reveals that the singlet intermediate HNiOCH₃ is crucial for the syngas formation, whereas two kinds of important reaction intermediates, CH₃NiOH and HNiOCH₃, locate on the deep well, while CH₃NiOH is more energetically favorable than HNiOCH₃ on both the triplet and singlet states. The main products shall be syngas once HNiOCH₃ is created on the singlet state, whereas the main products shall be methyl radical if CH₃NiOH is formed on both singlet and triplet states. For the formation of syngas, the minimal energy reaction pathway (MERP) is more energetically preferable to start on the lowest excited singlet state other than on the ground triplet state. Among the MERP for the formation of syngas, the rate‐determining step (RDS) is the reaction step for the singlet intermediate HNiOCH₃ formation involving an oxidative addition of NiO molecule into the C? H bond of methane, with an energy barrier of 120.3 kJ mol^?1. The syngas formation would be more effective under higher temperature and photolysis reaction condition. © 2009 Wiley Periodicals, Inc. J Comput Chem, 2009     

Theoretical study of reaction mechanism for CH2CHX(XH,F, Cl) with ozone

In this work, we study the reaction mechanism of the CH₂CHX(X?H, F, Cl) with ozone reactions, using ab initio MP2 method at 6‐311++g** basis set level. The geometric configurations of reactants, intermediates, transition states, and products were optimized, and the energies were obtained at the QCISD(T)/6‐311++G** level. The transition states and intermediates of the reactions were verified by the vibrational analysis. The results show that the ozonolysis of ethylene and its derivatives is reasonable and believable along the Criegee mechanism. The results also show that the activation energies of the controlling steps along the fluoroethylene and chloroethylene with ozone reaction pathways were lower than that along the ethylene with ozone reaction pathway. That is to say, the derivatives of ethylene have the higher activity to react with ozone and deplete the ozone layer. © 2004 Wiley Periodicals, Inc. Int J Quantum Chem, 2004     

The reaction of cyclopentyne with ethene: concerted vs stepwise mechanism?

The cycloaddition of cyclopentyne with ethene was examined using (U)B3LYP and CASSCF methods to discern the reaction mechanism. (U)B3LYP/6-31G* and (U)B3LYP/6-311+G* slightly favor the concerted pathway, whereas CASSCF(4,4)/6-31G* and CASCF(6,6)/6-31G* favor the diradical pathway. MRMP2 using the CASSCF(4,4) wave function also favors the diradical mechanism. In the context of a diradical pathway, the experimentally observed complete retention of stereochemistry for this reaction is understood in terms of stereochemical control resulting from dynamic effects.     

Comprehensive Theoretical and Experimental Studies on the CF3H Fire‐extinguishing Mechanism

In order to clarify the chemical suppression mechanisms of CF₃H, experimental and theoretical studies were conducted respectively in this paper. Firstly, the combustion species in low pressure laminar premixed flat methane flames with CF₃H addition is measured by synchrotron radiation molecular beam mass spectrometry (SR‐MBMS) experimentally. Fire suppression chemistry of CF₃H is investigated by selective detection of combustion radicals and intermediates in experimental process. Secondly, quantum chemistry calculations are performed to calculate the potential energy surfaces (PES) for the CF₃H unimolecular dissociation reaction and reactions of CF₃H with free radical OH and H at the B3LYP/6‐311++G** and QCISD(T)/6‐311++G** levels. Finally, the chemical suppression mechanism of CF₃H was discussed by comparing the theoretical calculation with experimental measurement.     

Beryllepin,C6H6Be,and “Beryllium‐Inserted Benzenes,” C6H6Ben,n = 2–6: A Density Functional Computational Investigation

The seven‐membered beryllium‐containing heterocycle beryllepin, C₆H₆Be, has been examined computationally at the B3LYP/6‐311++G** density functional level of theory. Beryllepin is best described as a planar singlet heterocyclic conjugated triene with marginal aromatic character containing a C–Be–C moiety forced to be nonlinear (∠C‐Be‐C = 146.25°) by the cyclic constraints of the seven‐membered ring. The molecule can be considered to be derived from a benzene‐like system in which a neutral beryllium atom has been inserted between two adjacent carbon atoms. The 11 other possible “beryllium‐inserted benzenes,” C₆H₆Be_n, n = 2–6, have also been investigated. Only two of these heterocyclic systems, the eight‐membered 1,4‐diberyllocin and the nine‐membered 1,4,7‐triberyllonin, were found to be stable, singlet‐ground‐state systems, albeit with little aromatic character. Of the remaining nine beryllium‐inserted benzenes, with the exception of the 11‐membered ring containing five beryllium atoms and the 12‐membered ring containing six beryllium atoms, which were calculated to exist as a ground state pentet and septet, respectively, all were calculated to be ground state triplet systems.     

Quantum chemical and experimental studies on the structure and vibrational spectra of substituted 2-pyranones

A systematic study on the structural characteristics of the 2-pyranone ring containing molecules with bromine, nitrile, and amide substituents at the C-3 position in the ring is conducted in the electronic ground (S ₀) state by DFT calculations using the B3LYP/6-311++G** method. The geometrical structure of the bromine substituted compound, which shows potent hepatoprotective activity, is studied both in the ground (S ₀) and first excited singlet (S ₁) states using RHF/6-311++G** and CIS/6-311++G** methods respectively. The molecules are found to exist in two isomeric forms gauche and trans that have the enthalpy difference of less than 3.32 kcal/mol; the latter is the preferred orientation in the gaseous phase. The S ₁ state is a ¹(π,π*) state that arises π-electron transfer from the region of a double bond in the pyranone ring to the region of the internuclear bond connecting the 2-pyranone and benzene rings. A complete vibrational analysis is conducted for the 3-bromo-6-(4-chlorophenyl)-4-thiomethyl-2H-pyran-2-one molecule based on the experimental infrared spectra in the 50–4000 cm⁻¹ region and DFT/6- 311++G** computations of vibrational frequencies for the gauche and trans isomeric forms. Spectral assignments based on the potential energy distribution along the internal coordinates confirm the nonplanar structure of the molecule.     

Heteroatom effects in XC5H5C Arduengo-type carbenes (X = CH,N, P,and As) in singlet and triplet states

Internal energy difference, ΔE _s-t; enthalpy difference, ΔH _s-t; Gibbs free energy difference, ΔG _s-t, between the singlet (s) and triplet states (t) of XC₅H₅C, 1X (X = CH, N, P, and As) were computed at B3LYP/6-311++G** and MP2/6-311++G**//B3LYP/6-311++G** levels of theory. The ΔG _s-t between the singlet and triplet states of 1 _X were changed in the order: 1 _P > 1 _As > 1 _N .     

1,4-Addition of benzene to a dihydrocyclopent[a]indene diradical: synthesis and DFT study

Photochemical cyclization of compound 1, a homoenediyne (-CCC=CCH2CC-) bearing two ethynylanthracene chromophores, yields two isomeric dihydrocyclopent[a]indene ring systems, spiro-fused to the 9-position of a 9,10-dihydroanthracene moiety. Evidence of a photochemically initiated diradical cyclization pathway is proposed on the basis of (i) hydrogen abstraction from reaction with 1,4-cyclohexadiene (1,4-CHD) and (ii) the observation of 1,4-addition of benzene (solvent). The reaction was further analyzed by a complete density functional theory (DFT) study, using an unrestricted approach (UBLYP) with a 6-31G* basis set for the open-shell triplet states of the reactants, products, and diradical intermediates to model the photochemical nature of observed transformation. A mechanism detailing the observed cyclization/addition reaction is proposed.     

Hetero‐π‐systems from 2 + 2 cycloreversion,part 2.1Ab initio thermochemical study of heterocyclobutanes 2 + 2 cycloreversion to form heteroethenes H2C=X (X=NH,O, SiH2, PH,S)

Ab initio and DFT thermochemical study of diradical mechanism of 2 + 2 cycloreversion of parent heterocyclobutanes and 1,3‐diheterocyclobutanes, cyclo‐(CH₂CH₂CH₂X), and cyclo‐(CH₂XCH₂X), where X = NH, O, SiH₂, PH, S, was undertaken by calculating closed‐shell singlet molecules at three levels of theory: MP4/6‐311G(d)//MP2/6‐31G(d)+ZPE, MP4/6‐311G(d,p)//MP2/6‐31G (d,p)+ZPE, and B3LYP/6‐311+G(d,p)+ZPE. The enthalpies of 2 + 2 cycloreversion decrease on going from group 14 to group 16 elements, being substantially higher for the second row elements. Normally endothermic 2 + 2 cycloreversion is predicted to be exothermic for 1,3‐diazetidine and 1,3‐dioxtane. Strain energies of the four‐membered rings were calculated via the appropriate homodesmic reactions. The enthalpies of ring opening via the every possible one‐bond homolysis that results in the formation of the corresponding 1,4‐diradical were found by subtracting the strain energies from the central bond dissociation energies of the heterobutanes CH₃CH₂—CH₂XH, CH₃CH₂—XCH₃, and HXCH₂—XCH₃. The latter energies were determined via the enthalpies of the appropriate dehydrocondensation reactions, using C—H and X—H bond energies in CH₃XH calculated at G2 level of theory. Except 1,3‐disiletane, in which ring‐opening enthalpy attains 69.7 kcal/mol, the enthalpies of the most economical ring openings do not exceed 60.7 kcal/mol. The 1,4‐diradical decomposition enthalpies found as differences between 2 + 2 cycloreversion and ring‐opening enthalpies were negative, the least exothermicity was calculated for ⋅ CH₂SiH₂CH₂CH₂. The only exception was 1,3‐disiletane, which being diradical, CH₂SiH₂CH₂SiH₂, decomposed endothermically. Since decomposition of the diradical containing two silicon atoms required extra energy, raising the enthalpy of the overall reaction to 78.9 kcal/mol, 1,3‐disiletane was predicted to be highly resisting to 2 + 2 cycloreversion. © 2007 Wiley Periodicals, Inc. Heteroatom Chem 18:704–720, 2007; Published online in Wiley InterScience ( www.interscience.wiley.com ). DOI 10.1002/hc.20377     

Reaction of CH3O2 and HO2: Ab initio characterization of dimer structure and vibrational mode analysis for reaction mechanisms

All species involved in the multi‐channel reaction of CH₃O₂ with HO₂ have been investigated using density functional theory (DFT). The molecular geometries for various species are optimized employing the B3LYP method implementing the 6‐311++G** basis set. The relative energies of all species are calculated at the same level theory. The results show that there are two kinds of channels: singlet and triplet. The singlet channel involves four intermediates and six transition states. The triplet channel includes two intermediates and two transition states. There are four kinds of reaction products: CH₃OOH + ¹O₂, CH₃OH + O₃, CH₄ + 2O₂, and CH₃OOH + ³O₂. The vibrational mode analysis is used to elucidate the relationships of the intermediates, the transition states, and the products. The extensive investigation shows that the reaction mechanism is reliable. © 2005 Wiley Periodicals, Inc. Int J Quantum Chem, 2006     

Direct dynamics study on mechanism and kinetics of the biradical self‐reaction of HOO

A theoretical study of the mechanism and the kinetics for the hydrogen abstraction reaction of the biradical hydroperoxy radical has been presented at the CCSD(T)/6‐311++G(3d,2p)//CCSD/6‐31+G(d,p) level of theory. Our theoretical calculations suppose a stepwise mechanism involving the formation of a postreactant complex in the triplet and singlet entrance channels. Four transition states of the six‐membered chain complexes (³TS1 and ¹TS1) and six‐membered ring complexes (³TS2 and ¹TS2) are located at the high dual level CCSD(T)/6‐311++G(3d,2p)//CCSD/6‐31+G(d,p) method. The rate constants of Path 1 ～ Path 4 at the CCSD(T)/6‐311++G(3d,2p)//CCSD/6‐31+G (d,p) level are calculated by means of the conventional transition state theory (TST) and canonical variational TST without and with small‐curvature tunneling (SCT) correction within the temperature range of 200–2,500 K. The calculated results show that the triplet channel is the dominating reaction channel and Path 2 is found to be the most favorable pathway. The rate constants of Path 2 are in good agreement with the experimental values at the experimentally measured temperatures. Moreover, the variational effect is not obvious in the low temperature range but is not neglectable in the high temperature range. The SCT plays an important role particularly in the low temperature range. © 2010 Wiley Periodicals, Inc. Int J Quantum Chem, 2011