Formation of mesoscopic water networks in aqueous systems

Formation of the macroscopically-infinite hydrogen-bonded water network in various aqueous systems occurs via 3D percolation transition when the probability of finding a spanning water cluster exceeds 95%. As a result, in a wide interval of water content below the percolation threshold, rarefied quasi-2D water networks span over the mesoscopic length scale. Formation and topology of spanning water networks, which affect various properties of aqueous systems, can be described within the framework of the percolation theory.     

Electronic structure study of hydrogen-bonded water clusters and linear-chain ice crystal using a modified mndo

A revised version of MNDO is employed particularly for the treatment of hydrogen-bonded water clusters and linear-chain ice. The computed results of the average hydrogen-bond energies and the first ionization energies for large water clusters and ice are found to correlate well with observation. In addition, using the tight-binding crystal orbital method of LCAO, the band structure of the linear-chain ice is reported.     

Evolution of the structure of amorphous ice: from low-density amorphous through high-density amorphous to very high-density amorphous ice

We report results of molecular dynamics simulations of amorphous ice for pressures up to 22.5 kbar. The high-density amorphous ice (HDA) as prepared by pressure-induced amorphization of I(h) ice at T=80 K is annealed to T=170 K at various pressures to allow for relaxation. Upon increase of pressure, relaxed amorphous ice undergoes a pronounced change of structure, ranging from the low-density amorphous ice at p=0, through a continuum of HDA states to the limiting very high-density amorphous ice (VHDA) regime above 10 kbar. The main part of the overall structural change takes place within the HDA megabasin, which includes a variety of structures with quite different local and medium-range order as well as network topology and spans a broad range of densities. The VHDA represents the limit to densification by adapting the hydrogen-bonded network topology, without creating interpenetrating networks. The connection between structure and metastability of various forms upon decompression and heating is studied and discussed. We also discuss the analogy with amorphous and crystalline silica. Finally, some conclusions concerning the relation between amorphous ice and supercooled water are drawn.     

Determination of the adsorption isotherm of methanol on the surface of ice. An experimental and grand canonical Monte Carlo simulation study

The adsorption isotherm of methanol on ice at 200 K has been determined both experimentally and by using the Grand Canonical Monte Carlo computer simulation method. The experimental and simulated isotherms agree well with each other; their deviations can be explained by a small (about 5 K) temperature shift in the simulation data and, possibly, by the non-ideality of the ice surface in the experimental situation. The analysis of the results has revealed that the saturated adsorption layer is monomolecular. At low surface coverage, the adsorption is driven by the methanol-ice interaction; however, at full coverage, methanol-methanol interactions become equally important. Under these conditions, about half of the adsorbed methanol molecules have one hydrogen-bonded water neighbor, and the other half have two hydrogen-bonded water neighbors. The vast majority of the methanols have a hydrogen-bonded methanol neighbor, as well.     

Hydrogen-bonded networks of 2,2′-substituted 4,4′-biimidazoles: New ligands for the assembled metal complexes

4,4′-Biimidazole derivatives having alkyl-substituents at 2- and 2′-positions were synthesized as new component molecules of supramolecular assemblies based on hydrogen-bonding interaction. The crystal structure analyses of methyl and ethyl derivatives revealed intriguing three-dimensional structures constructed by hydrogen-bonded networks. Furthermore, the methyl derivative formed a six-membered cyclic motif of hydrogen-bonded network to build up a channel structure. The ethyl derivative gave the two polymorphous, anhydrate and dihydrate, depending on conditions of the crystallization. The anhydrate constructed three-dimensional hydrogen-bonded networks by direct N–H⋯N hydrogen-bondings. In the crystal structure of the dihydrate of ethyl derivative, three-dimensional hydrogen-bonding interaction through water molecules formed a channel structure.     

Lattice- and network-structure in plastic ice

We have investigated structural and energetic characteristics of plastic ice, which was found in a high pressure region such as 10 GPa by molecular dynamics simulation and free energy calculation. It was predicted that plastic ice intervenes between ice VII and liquid water, in which diffusion is suppressed but rotation is allowed. In the present work, the structure in plastic ice is explored from both local and global view points and focus is placed on the local arrangement, the extent of deviation from the ideal lattice position, and the hydrogen-bonded patterns. The roles of the attractive interaction and the repulsive part of Lennard-Jones potential are also examined. It is found that the higher interaction energy in plastic ice induces a large dislocation of water molecules, which eventually conducts a facile rotation. There are a large amount of hydrogen-bonds which do not orient to the tetrahedral directions. These orientational defects give rise to fusion of the two interpenetrating sublattices of ice VII leading to a plastic phase rather than defect-containing ice VII, which results in a unique network structure of the plastic ice.     

An experimental study of crystallization and crystal growth of methane hydrates from melting ice

An experiment with well defined gas-water interfacial surface area was developed to study the crystallization and crystal growth of methane hydrates. Measurable formation rates were observed only when melting ice was involved. No hydrates nucleated from liquid water or from non-melting ice. It is concluded that melting ice, which like hydrate water is hydrogen-bonded, provides a template for hydrate nucleation as well as providing a heat sink for absorbing the heat of formation during hydrate growth. The experiment was conducted in the absence of mixing so that hydrate crystals grew under quiescent conditions.Dedicated to Dr D. W. Davidson in honor of his great contributions to the sciences of inclusion phenomena.     

How cryoprotectants work: hydrogen-bonding in low-temperature vitrified solutions

Dimethyl sulfoxide (DMSO) increases cell and tissue viability at low temperatures and is commonly used as a cryoprotectant for cryogenic storage of biological materials. DMSO disorders the water hydrogen-bond networks and inhibits ice-crystal growth, though the specific DMSO interactions with water are difficult to characterize. In this study, we use a combination of Fourier Transform infrared spectroscopy (FTIR), molecular dynamics simulations, and vibrational frequency maps to characterize the temperature-dependent hydrogen bonding interactions of DMSO with water from 30 °C to −80 °C. Specifically, broad peaks in O–D stretch vibrational spectra of DMSO and deuterated water (HDO) cosolvent systems show that the hydrogen bond networks become increasingly disrupted compared to pure water. Simulations demonstrated that these disrupted hydrogen bond networks remain largely localized to the first hydration shell of DMSO, which explains the high DMSO concentrations needed to prevent ice crystal formation in cryopreservation applications.

Dimethyl sulfoxide (DMSO) increases cell and tissue viability at low temperatures and is commonly used as a cryoprotectant for cryogenic storage of biological materials.     

Microwave heating of water, ice, and saline solution: molecular dynamics study

In order to study the heating process of water by the microwaves of 2.5-20 GHz frequencies, the authors have performed molecular dynamics simulations by adopting a nonpolarizable water model that has fixed point charges on a rigid-body geometry. All runs are started from the equilibrated states derived from the I(c) ice with given density and temperature. In the presence of microwaves, the molecules of liquid water exhibit rotational motion whose average phase is delayed from the microwave electric field. Microwave energy is transferred to the kinetic and intermolecular energies of water, where one-third of the absorbed microwave energy is stored as the latter energy. The water in ice phase is scarcely heated by microwaves because of the tight hydrogen-bonded network of water molecules. Dilute salt water is significantly more heated than pure water because of the field-induced motion of salt ions, especially that of large-size ions, by the microwave electric field and energy transfer to water molecules by collisions.     

The cooperative model for orientational defects in ice: Continuum approach

A kink-solitonic model of orientational defects in the hydrogen-bonded network of ice is proposed within the framework of the continuum approach for an infinite quasi-one-dimensional chain, (H₂O)∞, of water molecules.     

Room-temperature icelike water in kanemite detected by 2H NMR T1 relaxation

2H NMR was used to study the nature of deuterated water in kanemite. Evidence is presented that shows that the water changes state from liquid to solid at room temperature during the hydration reaction that forms kanemite. The deuterium nuclei in the water experience rapid tetrahedral jumps in a hydrogen-bonded lattice like those observed in 2H2O ice.     

Interstellar ice surface site modification induced by dicyanoacetylene adsorption

Dicyanoacetylene adsorbed on amorphous ice water at 10 K presents an interaction with the dangling H site and induces a s(4) adsorption site formation due to the restructuring of the ice bulk. Warming up the sample provokes the dicyanoacetylene desorption from the H(2)O ice film, which could be due to the beginning of the ice crystallization process. The desorption activation energy measured by temperature-programmed desorption (E(d) = 42 +/- 5 kJ x mol(-1)) is in good agreement with that calculated (E(d) = 46 kJ x mol(-1)) and gives evidence of a hydrogen-bonded adsorbed state on amorphous ice films.     

Preorganizing linear (self-complementary) quadruple hydrogen-bonding arrays using intramolecular hydrogen bonding as the sole force

[structures: see text] In this article we describe a rational approach for prefixing multiple cooperative binding sites in an ideal spatial arrangement on a structurally rigid backbone, constrained exclusively by intramolecular hydrogen bonding. The idea is exemplified by the ability of the self-assembling constructs 1a-e and 2a,b to form hydrogen-bonded dimers, whose structural preorganization has been solely effected by intramolecular hydrogen bonding. The readily accessible amidinourea backbone has been used as a common platform for the construction of a variety of such self-assembling systems. ESI mass spectrometry and single-crystal X-ray diffraction studies have been particularly effective in investigating the self-assembling propensities of these systems. Remarkably, most the H-bonded dimers reported herein undergo an unusual mode of self-assembly, using intermolecular four-membered ring hydrogen-bonded interaction, affording extended supramolecular networks.     

Spectroscopic signatures of halogens in clathrate hydrate cages. 1. Bromine

We report the first UV-vis spectroscopic study of bromine molecules confined in clathrate hydrate cages. Bromine in its natural hydrate occupies 51262 and 51263 lattice cavities. Bromine also can be encapsulated into the larger 51264 cages of a type II hydrate formed mainly from tetrahydrofuran or dichloromethane and water. The visible spectra of the enclathrated halogen molecule retain the spectral envelope of the gas-phase spectra while shifting to the blue. In contrast, spectra of bromine in liquid water or amorphous ice are broadened and significantly more blue-shifted. The absorption bands shift by about 360 cm-1 for bromine in large 51264 cages of type II clathrate, by about 900 cm-1 for bromine in a combination of 51262 and 51263 cages of pure bromine hydrate, and by more than 1700 cm-1 for bromine in liquid water or amorphous ice. The dramatic shift and broadening in water and ice is due to the strong interaction of the water lone-pair orbitals with the halogen sigma* orbital. In the clathrate hydrates, the oxygen lone-pair orbitals are all involved in the hydrogen-bonded water lattice and are thus unavailable to interact with the halogen guest molecule. The blue shifts observed in the clathrate hydrate cages are related to the spatial constraints on the halogen excited states by the cage walls.     

Neutron vibrational spectroscopy gives new insights into the structure of poly(p-phenylene terephthalamide)

The vibrational spectra of benzanilide and poly(p-phenylene terephthalamide) have been measured using inelastic neutron scattering. These compounds have similar hydrogen-bond networks, which, for poly(p-phenylene terephthalamide), lead to two-dimensional hydrogen-bonded sheets in the crystal. Experimental spectra are compared with solid-state, quantum chemical calculations based on density functional theory (DFT). Such "parameter-free" calculations allow the structure-dynamics relation in this type of compound to be quantified, which is demonstrated here for benzanilide. In the case of poly(p-phenylene terephthalamide), vibrational spectroscopy and DFT calculations help resolve long-standing questions about the packing of hydrogen-bonded sheets in the solid state.     

Hydrogen bond networks in water and methanol with varying interaction strengths

Metropolis Monte Carlo simulations of hydrogen-bonded liquids (water and methanol) were performed with the well tested effective pair potentials TIP5P and OPLS. The Coulomb contribution for the interaction potential was damped by a factor η varied from 1 to 0.49 for water and 1 to 0.15 for methanol. As a result, the networks formed by the hydrogen-bonded molecules presented interesting properties as a function of η, including small-world patterns and percolation transitions. These complex networks were analyzed by local (clustering coefficients, average degrees), semi-global (path lengths) and global (spectral densities) properties, and islands statistics. From these properties, small-world behavior was found for η in the range 0.60-0.75 for both liquids, interestingly independent of the molecular structure of the liquid. Phase transition behavior was observed for the average degrees and the clustering coefficient curves with critical values at 0.55 for water and 0.34 for methanol. Macroscopic properties such as mass density and vaporization enthalpy were also parametrically dependent on η and they presented phase transition behavior that coincides with the critical values obtained from the topological analysis. This is probably the first time that such phase transitions are observed for these quantities and shows a direct relation between macroscopic properties and topological features of hydrogen bond networks.     

The single-crystal, basal face of ice I(h) investigated with sum frequency generation

Sum frequency generation spectroscopy has been used to investigate the hydrogen-bonded region of single-crystal, hexagonal ice in the temperature range of 113-178 K. The temperature and polarization dependences of the signal are used in conjunction with a recent theoretical model to suggest an interpretation of the bluest and reddest of the hydrogen-bonded peaks. The reddest feature is associated with strong hydrogen bonding; the dynamic polarizability of this feature is primarily parallel to the surface. It is assigned to a cooperative motion among the companion to the free-OH and four-coordinate oscillators hydrogen bonded to dangling lone-pair molecules on the surface. The bluest hydrogen-bonded feature is similarly assigned to a cooperative motion of the OH stretch of dangling lone-pair molecules and of four-coordinate molecules in the lower half bilayer that are hydrogen bonded to free-OH molecules. Reconstruction induced strain is present at as low as 113 K. These results provide a richer picture of the ice surface than has heretofore been possible.     

Hydrogen-bonded donor--acceptor compounds for organic ferroelectric materials

Organic ferroelectrics are multifunctional candidates for future organic electronic and optical devices. In spite of their potential, only a few organic compounds are known to exhibit a ferroelectric transition. The conventional approach to ferroelectrics, in general, relies on the use of asymmetric dipolar molecules and/or substituents. Recently, distinct design strategies have been developed using the molecular compounds of binary- or multi-components, combined with "non-covalent" forces: charge-transfer interactions and/or hydrogen bonding. This article focuses on the supramolecular systems of hydrogen-bonded acid and base molecules. Ferroelectricity and a significant dielectric response, as well as an antiferroelectric ordering induced by proton transfer, are demonstrated in the hydrogen-bonded chains composed of 2,5-dihydroxy-p-benzoquinone derivatives and nitrogen-containing aromatic bases.     

Micro-Raman investigations of the formaldehyde-ice system

Rapidly frozen aqueous solutions containing variable amounts of dissolved formaldehyde (0.1, 5, 7, 10, 15, and 20 mol %) have been analyzed by micro-Raman spectroscopy at ambient pressure and low temperature. The importance of the formladehyde-ice system has been repeatedly quoted in various contexts, such as atmospheric and snowpack chemistry and interstellar and cometary ices. Understanding and characterizing the effects of freezing and the interactions of formaldehyde with ice are therefore of relevant interest. In this study, the distinct vibrational signatures of the oligomers present in the solution and in the frozen ice mixtures have been identified in the 120-4000 cm(-1) spectral range. From the subtle changes of the bands assigned to the CO and CH group frequencies, at least two distinct crystalline phases (pI and pII) are found to coexist with ice at different temperatures. Depending on the cooling-rewarming protocol, pI is found to crystallize in the 163-213 K temperature range. Above approximately 213 K, pI gets transformed irreversibly into pII which is stable up to approximately 234 K. pII is found to interact more strongly with ice than pI, as revealed, for example, by the drop in frequency of the bands assigned to the O-H stretching as pI transforms into pII. It is suggested that pII consists of a hydrogen-bonded network of oligomers and water molecules. On the other hand, it is suggested that the oligomers mainly present in pI interact through weak forces with the surrounding water molecules.     

Construction of two-dimensional (2D) H-bonded supramolecular nanostructures studied by STM

In this review,a group of two-dimensional（2D） hydrogen-bonded supramolecular networks developed in our laboratory are discussed.Our attention is mainly focused on:（1） recognition of Fe³⁺ through twocomponent molecular networks;（2） site-selective fabrication of 2D fullerene arrays;and（3） fabrication of the nanoporous structure regulated by photoisomerization reaction process.It is envisioned that special supramolecular nanostructures,through H-bonding interactions,can be constructed or reconstructed to be further investigated toward the research of multi-component systems,molecule recognition,single molecular switches,and host-guest supramolecular chemistry.