In-plane pyridinium cation reorientation in bis-thiourea chloride, bromide and iodide: quasielastic neutron scattering combined with molecular dynamics simulations

We have studied the dynamics of bis-thiourea pyridinium chloride and bromide by means of quasielastic neutron scattering (QENS). The QENS data allow describing the geometry of the in-plane motion of the pyridinium cation and reveal that it is similar to the motion previously observed in bis-thiourea pyridinium iodide. Molecular dynamics (MD) simulations have been performed to investigate the cation dynamics on the high temperature phase of the full series of compounds: bis-thiourea pyridinium chloride, bromide and iodide. Three different models of intermolecular potential have been tested and the agreement between the simulated and experimental elastic incoherent structure factors (EISFs) is used to select the more realistic one. The detailed analysis of the MD results indicates that Coulombic interactions together with the formation of hydrogen bonds between the pyridinium cation and the host sublattice influence strongly the geometry of the in-plane cation reorientation.     

A study of out-of-plane cation dynamics in a bis-thiourea pyridinium chloride inclusion compound

The out-of-plane motion of the pyridinium cation in the bis-thiourea pyridinium chloride inclusion compound has been studied in a wide temperature range using (1)H NMR, dielectric spectroscopy and quasielastic neutron scattering. The geometry of this motion is obtained from the Q-dependence of the elastic incoherent structure factor determined from the quasielastic neutron scattering measurements. We find that the pyridinium cation performs out-of-plane reorientations around the axis passing through two opposite atoms of the ring. The correlation times as a function of temperature were measured in the three known crystallographic phases, finding a good agreement between the three techniques employed. The activation energy for this motion changes from 5 ± 1 kJ mol(-1) in the low-temperature phase to 1.2 ± 0.2 kJ mol(-1) in the intermediate and high-temperature phases.     

Quasielastic neutron scattering study of pyridinium cation reorientation in thiourea pyridinium nitrate inclusion compound

The dynamics of the pyridinium cation in thiourea pyridinium nitrate inclusion compound has been studied using quasielastic neutron scattering in a wide temperature range (10-350 K). The elastic incoherent structure factor was determined from neutron backscattering and time-of-flight measurements and its analysis allows to describe in detail the geometry of the motions of the pyridinium cation. Our study reveals two types of motion having two different correlation times. The pyridinium cation reorients about the axis perpendicular to its molecular plane over inequivalent threefold potential energy barriers and also executes a faster out-of-plane motion about the axis passing through two opposite atoms of the ring.     

Liquid phase behavior of ionic liquids with alcohols: experimental studies and modeling

Ionic liquids (ILs) have been suggested as potential "green" solvents to replace volatile organic solvents in reaction and separation processes due to their negligible vapor pressure. To develop ILs for these applications, it is important to gain a fundamental understanding of the factors that control the phase behavior of ionic liquids with other liquids. In this work, we continue our study of the effect of chemical and structural factors on the phase behavior of ionic liquids with alcohols, focusing on pyridinium ILs for comparison to imidazolium ILs from our previous studies. The impact of different alcohol and IL characteristics, including alcohol chain length, cation alkyl chain length, anion, different substituent groups on the pyridinium cation, and type of cation (pyridinium vs imidazolium) will be discussed. In general, the same type of behavior is observed for pyridinium and imidazolium ILs, with all systems studied exhibiting upper critical solution temperature behavior. The impacts of alcohol chain length, cation chain length, and anion, are the same for pyridinium ILs as those observed previously for imidazolium ILs. However, the effect of cation type on the phase behavior is dependent on the strength of the cation-anion interaction. Additionally, all systems from this study and our previous work for imidazolium ILs were modeled using the nonrandom two-liquid (NRTL) equation using two different approaches for determining the adjustable parameters. For all systems, the NRTL equation with binary interaction parameters with a linear temperature dependence provided a good fit of the experimental data.     

Anion-templated rotaxane formation

The development of an acyclic chloride anion template in which the chloride anion is coordinatively unsaturated and available for subsequent complexation to various hydrogen bond donating components is described. This template orients a neutral hydrogen bond donating ligand and a pyridinium cation orthogonally to one another. Incorporation of second-sphere interactions between the ligand and the pyridinium cation improved the efficacy of the chloride template. These results were exploited in the construction of a chloride anion-templated [2]rotaxane which, after anion template removal, was studied with regards to its anion recognition properties. Encirclement of the neutral macrocycle around the dumbbell-shaped pyridinium cation in the [2]rotaxane produced a dramatic increase in its selectivity for chloride anions as compared to the noninterlocked cation. This is interpreted as a function of the anion template used to create the [2]rotaxane superstructure.     

层状有机-无机杂化钙钛矿(C7H12N2)PbBr4的合成、结构及发光性质

通过向杂化体系中引入特殊的有机配体2-（2-氨基乙基）吡啶,利用溶液冷却技术,合成了一种二维层状有机-无机杂化钙钛矿结构材料的化合物(C7H12N2)PbBr4的晶体。 X射线单晶衍射结果表明,化合物(C7H12N2)PbBr4的单晶结构属于正交晶系,Pbca空间群,a=1.702 3 nm,b=0.828 9 nm,c=2.022 4 nm,Z=8。 无机部分是由共顶点的PbBr6金属卤化物八面体组成的二维平面片层。 采用了相对扭曲构型的有机胺阳离子与二维无机片层通过氢键作用组成了杂化钙钛矿结构。 对其光学性质进行了测试。荧光光谱的特征发射峰出现在422 nm处。     

Structural dynamics of supercooled water from quasielastic neutron scattering and molecular simulations

One of the outstanding challenges presented by liquid water is to understand how molecules can move on a picosecond time scale despite being incorporated in a three-dimensional network of relatively strong H-bonds. This challenge is exacerbated in the supercooled state, where the dramatic slowing down of structural dynamics is reminiscent of the, equally poorly understood, generic behavior of liquids near the glass transition temperature. By probing single-molecule dynamics on a wide range of time and length scales, quasielastic neutron scattering (QENS) can potentially reveal the mechanistic details of water's structural dynamics, but because of interpretational ambiguities this potential has not been fully realized. To resolve these issues, we present here an extensive set of high-quality QENS data from water in the range 253-293 K and a corresponding set of molecular dynamics (MD) simulations to facilitate and validate the interpretation. Using a model-free approach, we analyze the QENS data in terms of two motional components. Based on the dynamical clustering observed in MD trajectories, we identify these components with two distinct types of structural dynamics: picosecond local (L) structural fluctuations within dynamical basins and slower interbasin jumps (J). The Q-dependence of the dominant QENS component, associated with J dynamics, can be quantitatively rationalized with a continuous-time random walk (CTRW) model with an apparent jump length that depends on low-order moments of the jump length and waiting time distributions. Using a simple coarse-graining algorithm to quantitatively identify dynamical basins, we map the newtonian MD trajectory on a CTRW trajectory, from which the jump length and waiting time distributions are computed. The jump length distribution is gaussian and the rms jump length increases from 1.5 to 1.9 A? as the temperature increases from 253 to 293 K. The rms basin radius increases from 0.71 to 0.75 A? over the same range. The waiting time distribution is exponential at all investigated temperatures, ruling out significant dynamical heterogeneity. However, a simulation at 238 K reveals a small but significant dynamical heterogeneity. The macroscopic diffusion coefficient deduced from the QENS data agrees quantitatively with NMR and tracer results. We compare our QENS analysis with existing approaches, arguing that the apparent dynamical heterogeneity implied by stretched exponential fitting functions results from the failure to distinguish intrabasin (L) from interbasin (J) structural dynamics. We propose that the apparent dynamical singularity at ～220 K corresponds to freezing out of J dynamics, while the calorimetric glass transition corresponds to freezing out of L dynamics.     

Comparative Analysis of Hydration Layer Reorientation Dynamics of Antifreeze Protein and Protein Cytochrome P450

Antifreeze proteins (AFPs) inhibit ice recrystallization by a mechanism remaining largely elusive. Dynamics of AFPs' hydration water and its involvement in the antifreeze activity have not been identified conclusively. We herein, by simulation and theory, examined the water reorientation dynamics in the first hydration layer of an AFP from the spruce budworm, Choristoneura fumiferana, compared with a protein cytochrome P450 (CYP). The increase of potential acceptor water molecules around donor water molecules leads to the acceleration of hydrogen bond exchange between water molecules. Therefore, the jump reorientation of water molecules around the AFP active region is accelerated. Due to the mutual coupling and excitation of hydrogen bond exchange, with the acceleration of hydrogen bond exchange, the rearrangement of the hydrogen bond network and the frame reorientation of water are accelerated. Therefore, the water reorientation dynamics of AFP is faster than that of CYP. The results of this study provide a new physical image of antifreeze protein and a new understanding of the antifreeze mechanism of antifreeze proteins.     

Vibrational spectroscopy and dynamics of small anions in ionic liquid solutions

Fourier-transform infrared (FTIR) and time-resolved IR spectroscopies have been used to study vibrational band positions, vibrational energy relaxation (VER) rates, and reorientation times of anions in several ionic liquid (IL) solutions. The ILs primarily investigated are based on the 1-butyl-2,3-dimethylimidazolium ([BM(2)IM]) cation with thiocyanate (NCS-), dicyanamide (N(CN)2-), and tetrafluoroborate (BF4-) anions. Spectroscopic studies are carried out near 2000 cm-1 for the C[Triple Bond]N stretching bands of NCS- and N(CN)2- as the IL anion as well as for NCS-, N(CN)2-, and azide (N3-) anions dissolved in [BM2IM][BF4]. The VER studies of N(CN)2- are reported for the first time. VER of N3-, NCS-, and N(CN)2- is measured in normal solvents, such as N-methylformamide, to compare with the IL solutions. The spectral shifts and VER rates of the anions in IL solution are quite similar to those in polar aprotic, conventional organic solvents, i.e., dimethylsulfoxide, and significantly different than those in methanol, in which there is hydrogen bonding. Similar studies were also carried out for the anions in another IL, 1-butyl-3-methylimidazolium tetrafluoroborate ([BMIM][BF4]), in which the C2 hydrogen is present. The results for the anions are similar to those in the [BM2IM] containing ILs, in which the C2 hydrogen is methyl substituted. This suggests that substituting this hydrogen has, at most, a minor effect on the degree of hydrogen bonding in the anion-IL solvation interaction based on the infrared spectra and dynamics.     

吡啶离子液体阳离子的离子色谱法分析

建立了离子色谱-直接电导检测法分离测定3种吡啶离子液体阳离子(N-乙基吡啶、N-丁基吡啶和N-己基吡啶阳离子)的方法.采用磺酸型阳离子交换色谱柱,以乙二胺-柠檬酸-乙腈为淋洗液,考察了淋洗液种类和浓度以及色谱柱温度对离子液体阳离子保留的影响.实验发现,吡啶阳离子的保留过程是放热过程,其同系物的保留符合碳数规律.优化的色...     

Reorientational dynamics of the dodecahydro-closo-dodecaborate anion in Cs2B12H12

Rapid reorientational motions of the B(12)H(12)(2-) icosahedral anion, a key intermediate in borohydride dehydrogenation, are revealed by quasielastic neutron scattering (QENS) measurements of Cs(2)B(12)H(12) between 430 and 530 K. At 430 K, over the range of momentum transfers collected, the elastic incoherent structure factor (EISF) is consistent with a model for reorientational jumps about a single molecular axis. At temperatures of 480 K and higher, however, the EISF suggests the emergence of multiaxis reorientation by dynamically similar, independent jumps about two axes, on average, preserving crystallographic order. Alternatively, if one assumes that the anions are undergoing temperature-dependent rotational trapping, then the EISF is also consistent with a jump model involving a temperature-dependent mobile fraction of anions statistically tumbling between discrete crystallographic sites. Although neutron vibrational spectra demonstrate that the anion torsional modes soften dramatically with increasing temperature, the QENS-derived activation energy of 333 meV for reorientation clearly shows that the anions are not undergoing isotropic rotational diffusion.     

Water motion in reverse micelles studied by quasielastic neutron scattering and molecular dynamics simulations

Motion of water molecules in Aerosol OT [sodium bis(2-ethylhexyl) sulfosuccinate, AOT] reverse micelles with water content w(0) ranging from 1 to 5 has been explored both experimentally through quasielastic neutron scattering (QENS) and with molecular dynamics (MD) simulations. The experiments were performed at the energy resolution of 85 microeV over the momentum transfer (Q) range of 0.36-2.53 A(-1) on samples in which the nonpolar phase (isooctane) and the AOT alkyl chains were deuterated, thereby suppressing their contribution to the QENS signal. QENS results were analyzed via a jump-diffusion/isotropic rotation model, which fits the results reasonably well despite the fact that confinement effects are not explicitly taken into account. This analysis indicates that in reverse micelles with low-water content (w(0)=1 and 2.5) translational diffusion rate is too slow to be detected, while for w(0)=5 the diffusion coefficient is much smaller than for bulk water. Rotational diffusion coefficients obtained from this analysis increase with w(0) and are smaller than for bulk water, but rotational mobility is less drastically reduced than translational mobility. Using the Faeder/Ladanyi model [J. Phys. Chem. B 104, 1033 (2000)] of reverse micelle interior, MD simulations were performed to calculate the self-intermediate scattering function F(S)(Q,t) for water hydrogens. Comparison of the time Fourier transform of this F(S)(Q,t) with the QENS dynamic structure factor S(Q,omega), shows good agreement between the model and experiment. Separate intermediate scattering functions F(S) (R)(Q,t) and F(S) (CM)(Q,t) were determined for rotational and translational motion. Consistent with the decoupling approximation used in the analysis of QENS data, the product of F(S) (R)(Q,t) and F(S) (CM)(Q,t) is a good approximation to the total F(S)(Q,t). We find that the decay of F(S) (CM)(Q,t) is nonexponential and our analysis of the MD data indicates that this behavior is due to lower water mobility close to the interface and to confinement-induced restrictions on the range of translational displacements. Rotational relaxation also exhibits nonexponential decay. However, rotational mobility of O-H bond vectors in the interfacial region remains fairly high due to the lower density of water-water hydrogen bonds in the vicinity of the interface.     

Investigation on the Coordination Mode of IL-Supported Diols Used as Phosphine-Free Ligands for Palladium Catalyzed Heck Reaction

The coordination mode of IL-supported diols used as phosphine-free ligands for palladium catalyzed Heck reaction has been investigated by tuning their compositions. The difference in coordination of these IL-supported diols with metal Pd in Heck reaction was related to the changes of the cation rings, leading to the different activities of Pd catalyst in the reaction. The experimental results indicated that the activities of Pd catalyst were affected mainly by n-electron density of the cation rings. Compared to pyridinium and piperidinium cations, imidazolium cations showed the best coordination to metal Pd. In the meantime, C-2 hydrogen and the length of alkyl side chains had impacts on the coordination as well.     

The electrochemical stability of ionic liquids and deep eutectic solvents

Room temperature ionic liquids (ILs) composed of cations and anions, as well as deep eutectic solvents (DESs) composed of hydrogen bond donors (HBDs) and hydrogen bond acceptors (HBAs), are regarded as green solvents due to their low volatility. They have been used widely for electrochemically driven reactions because they exhibit high conductivity and excellent electrochemical stability. However, no systematic investigations on the electrochemical potential windows (EPWs), which could be used to characterize the electrochemical stability, have been reported. In this regard, the EPWs of 33 ILs and 23 DESs have been studied utilizing cyclic voltammetry (CV) method and the effects of structural factors (cations and anions of ILs, and HBDs and HBAs of DESs) and external factors (electrode, water content) on the EPWs have been comprehensively investigated. The electrochemical stability of selected ILs comprising five traditional cations, namely imidazolium, pyridinium, pyrrolidinium, piperidinium and ammonium and 13 kinds of versatile anions was studied. The results show that for ILs, both cation and anion play an important role on the reductive and oxidative potential limit. For a same IL at different working electrode, for example, glassy carbon (GC), gold (Au) and platinum (Pt) electrode, the largest potential window is almost observed on the GC working electrode. The investigations on the EPWs of choline chloride (ChCl), choline bromide (ChBr), choline iodide (ChI), and methyl urea based DESs show that the DES composed of ChCl and methyl urea has the largest potential window. This work may aid the selection of ILs or DESs for use as a direct electrolyte or a solvent in electrochemical applications.     

Orientational and translational dynamics in room temperature ionic liquids

The authors investigate the dynamics of a series of room temperature ionic liquids, based on the same 1-butyl-3-methylimidazolium cation with different anions, by means of broadband (10(-6)-10(9) Hz) dielectric spectroscopy and depolarized light scattering in the temperature range from 400 K down to 35 K. Typical ionic conductivity is observed above the glass transition temperature Tg. Below Tg the authors detect relaxation processes that exhibit characteristics of secondary relaxations, as typically observed in molecular glasses. At high temperatures, the characteristic times of cation reorientation, deduced from the light scattering data, are approximately equal to the electric modulus relaxation times related to ionic conductivity. In the supercooled regime and close to Tg, the authors observe decoupling of conductivity from structural relaxation. Overall, room temperature ionic liquids exhibit typical glass transition dynamics, apparently unaltered by Coulomb interactions.     

Réduction électrochimique de porphyrines portant un groupement électroactif pyridinium

The electrochemical reduction of meso-tetraphenylporphyrins β-substituted by a pyridinium group was investigated in N,N-dimethylformamide. The measurements showed the presence of two distinct electroactive sites – the pyridinium cation and the porphyrin ligand – involved in three successive one-electron charge transfers. The pyridinium cation is reduced before the porphyrin ligand, leading to the formation of a neutral radical species. The reduction of the porphyrin ligand takes place at more cathodic potentials that are close to those of the corresponding unsubstituted porphyrin. This result was expected taking into account the neutral state of the pyridinium group that follows its reduction. The decrease of the reduction potentials of the pyridinium cation fits well with the evolution of the electronic densities of the porphyrin ligand in the series H₂ < Cu < Zn. The depicted evolution clearly demonstrates the presence of the mutual electronic interactions between the two different electroactive sites in these molecules and the important electrodonating effect of the porphyrin ligand. The reduction of the pyridinium group, which is reversible for the free base, becomes irreversible for the metalloporphyrin. A possible dimerisation of the molecules via the reduced pyridinium group is proposed. These results are discussed on the basis of the d–π interactions existing in the metalloporphyrins.     

Kinetics of water filling the hydrophobic channels of narrow carbon nanotubes studied by molecular dynamics simulations

The kinetics of water filling narrow single-walled carbon nanotubes was studied using molecular dynamics simulations. The time required to fully fill a nanotube was linear with respect to the tube length. We observed that water molecules could enter into nanotubes of different lengths, either from one end or from both ends. The probability of having a nanotube filled completely from both ends increased exponentially with the tube length. For short tubes, filling usually proceeded from only one end. For long tubes, filling generally proceeded from both tube ends over three stages, i.e., filling from one end, filling from both ends, and filling from both ends with the dipole reorientation of water molecules to give a concerted ordering within the fully filled tube. The water molecules in the partially filled nanotube were hydrogen bonded similarly to those in the fully filled nanotube. Simulations for the reference Lennard-Jones fluid without hydrogen bonds were also performed and showed that the filling behavior of water molecules can be attributed to strong intermolecular hydrogen bonding.     

Chiral pyridinium-based ionic liquids containing the (1R,2S,5R)-(−)-menthyl group

A novel class of chiral pyridinium salts in which the chirality resides in the cation have been prepared and characterized. The physicochemical and anti-microbial properties have been determined. The group of prepared salts contained chiral ionic liquids and decomposable chiral pyridinium chlorides.     

Structure of dense hydrogen fluoride gas from neutron diffraction and molecular dynamics simulations

The gas phase of hydrogen fluoride has been investigated by neutron diffraction experiments at three different particle densities. All investigated states are within the liquid-gas coexistence region of hydrogen fluoride. From the obtained diffraction data we deduced information about the local structure of the gas phase, which consists of small agglomerates. This has been expected as liquid hydrogen fluoride forms the strongest hydrogen bonds known. Molecular dynamics simulations with a modified potential have been carried out for all experimentally investigated states. The results confirmed that the size of the formed agglomerates in the gas phase is growing with increasing density of the gas phase.