Metal-(phenylthio)alkanoic acid interactions— VII. The crystal and molecular structures of diaquabis[(benzylthio)acetato]-zinc(II), catena- [diaqua-tetra[(benzylthio)acetato]-bis[cadmium(II)], catena-tetra-μ-{2-methyl-3- (phenylthio)propionato-O,O′]-bis[copper(II)]} and tetra-μ-[2-methyl-2-(phenylthio)propionato-O,O′]- bis[ethanolcopper(II)]

The crystal structures of diaquabis[(benzylthio)acetato]zinc(II), [Zn(BTA)₂ (H₂O)₂] (1), catena-[diaqua-tetra[(benzylthio)acetato)]-bis[cadmium(II)], [Cd₂(BTA)₄ H₂O)₂]_n (2), catena-{tetra-μ-[2-methyl-3-(phenylthio)propionato-O,O′]-bis[copper (II)]}, [Cu₂(MPTP)₄]_n (3) and tetra-μ-[2-methyl-2-(phenylthio)propionato-O,O′]- bis[ethanol copper(II)], [Cu₂(PTIBA)₄(EtOH)₂] (4) have been determined using X-ray diffraction techniques. Complex (1) is monomeric with distorted octahedral stereochemistry and lies on a two-fold rotational axis. The MO₆ coordination involves four oxygens from two slightly asymmetric bidentate BTA car☐yl groups [ZnO, 2.138(3), 2.28(3)Å] and two cis-related waters [ZnOw, 1.996(3)Å]. The cadmium complex (2) is best described in terms of a polymer with the repeating unit consisting of two different centres, one seven, the other six-coordinate. With the first, the distorted MO₆S coordination sphere has four oxygens from two asymmetric bidentate car☐ylate groups (ligands B and C) [CdO, 2.36, 2.56(1)Å; 2.26, 2.67(1)Å], an oxygen and a sulphur from a bidentate chelate ligand (A) [CdO, 2.36(1)Å; CdS, 2.773(4)Å] and an oxygen from a bridging car☐yl group (ligand D) [CdO, 2.28(1)Å]. Ligands C and D also bridge two Cd centres through sulphurs [CdS, 2.739, 2.723(4)Å]. The second car☐yl oxygen of ligand A also forms a bridge to the second Cd [(CdO, 2.30(1)Å], while the distorted octahedral MO₄S₂ stereochemistry is completed by two waters [CdO, 2.25(1), 2.49(1)Å] and a sulphur from ligand D [CdS, 2.723(4)Å] giving a polymer structure. Complexes (3) and (4) are centrosymmetric tetra-car☐ylate bridged dimers [for (3) Cu ··· Cu, 2.586(3)Å; mean CuO(equatorial), 1.957(11)Å; for the two independent dimers in (4), Cu ··· Cu, 2.596(1), 2.616(1)Å; CuO (equatorial), 1.952(4), 1.968(4)Åmean]. The axial positions of the dimer in (3) are occupied by car☐yl oxygens of adjacent dimers [CuO, 2.280(9)Å] forming a polymer structure. In contrast, these positions in (4) are occupied by ethanol molecules with CuO, 2.222(3) and 2.177(4)Årespectively for the two independent dimers.     

Molecular structure of caffeine as determined by gas electron diffraction aided by theoretical calculations

The molecular structure of caffeine (3,7-dihydro-1,3,7-trimethyl-1H-purine-2,6-dione) was determined by means of gas electron diffraction. The nozzle temperature was 185 °C. The results of MP2 and B3LYP calculations with the 6-31G⁷ basis set were used as supporting information. These calculations predicted that caffeine has only one conformer and some of the methyl groups perform low frequency internal rotation. The electron diffraction data were analyzed on this basis. The determined structural parameters (r_g and ∠_α) of caffeine are as follows: <r(NC)_ring> = 1.382(3) Å; r(CC) = 1.382(←) Å; r(CC) = 1.446(18) Å; r(CN) = 1.297(11) Å; <r(NC_methyl)> = 1.459(13) Å; <r(CO)> = 1.206(5) Å; <r(CH)> = 1.085(11) Å; ∠N₁C₂N₃ = 116.5(11)°; ∠N₃C₄C₅ = 121. 5(13)°; ∠C₄C₅C₆ = 122.9(10)°; ∠C₄C₅N₇ = 104.7(14)°; ∠N₉–C₄=C₅ = 111.6(10)°; <∠NCH_methyl> = 108.5(28)°. Angle brackets denote average values; parenthesized values are the estimated limits of error (3σ) referring to the last significant digit; left arrow in parentheses means that this parameter is bound to the preceding one.     

A theoretical study on the alkene insertion step in Rh-Yanphos catalyzed hydroformylation

This paper studied the mechanism of the alkene insertion elementary step in the asymmetric hydroformylation （AHF） catalyzed by RhH（CO）2[（R,S）-Yanphos] using four alkene substrates （CH2=CH- Ph, CH2=CH-Ph-（p）-Me, CH2=CH-C（==O）OCH3 and CH2=CH-OC（=O）-Ph, abbreviated as A1-A4）. Interestingly, the equatorial vertical coordination mode （A mode） with respect to the Rh center was found for AI and A2 but not for A3 and A4, although the equatorial in-plane coordination mode （E mode） was found for A1 -A4. The relative energy of the E mode of the -q2-intermediates is lower than that of the A mode. In the alkene insertion step, Path 1 is more favorable than Path 2 for this system. As for AI and A2, there could be a transformation between 2eq and 2ax.     

Perturbation par l''oxygene de l''oxydation anodique De l''anion complexe cr(co)5cn

OsCl₂(CFCl)(CO)(PPh₃)₂ results from reaction between OsCl₂(CCl₂)(CO)(PPh₃)₂ and Cd(CF₃)₂(DME). The CFCl ligand is converted into CFNMe₂ and CFSEt ligands through reaction with Me₂NH and NaSEt, respectively. The crystal structure of RuCl₂(CFOCH₂CMe₃)(CO)(PPh₃)₂ reveals the following dimensions about the carbene-carbon atom: RuC, 1.914(5)Å; CO, 1.303(7)Å; CF, 1.307(6)Å; RuCF, 127.1(4)°; RuCO, 125.5(4)°; FCO, 107.4(5)°.     

Structure,infrared and Raman spectroscopic studies of newly synthetic AII(SbV0.50FeIII0.50)(PO4)2 (ABa,Sr, Pb) phosphates with yavapaiite structure

The synthesis and structural study of three new A^II(Sb^V_0.5Fe^III_0.5)(PO₄)₂ (ABa, Sr, Pb) phosphates belonging to the ASbFePO system were reported here for the first time. Structures of [Ba], [Sr] and [Pb] compounds, obtained by solid state reaction in air atmosphere, were determined at room temperature from X-ray powder diffraction using the Rietveld method. Ba^II(Sb^V_0.5Fe^III_0.5)(PO₄)₂ features the yavapaiite-type structure, with space group C2/m, Z = 2 and a = 8.1568(4) Å; b = 5.1996(3) Å c = 7.8290(4) Å; β = 94.53(1)°. A^II(Sb^V_0.5Fe^III_0.5)(PO₄)₂ (ASr, Pb) compounds have a distorted yavapaiite structure with space group C2/c, Z = 4 and a = 16.5215(2) Å; b = 5.1891(1) Å c = 8.0489(1) Å; β = 115.70(1)° for [Sr]; a = 16.6925(2) Å; b = 5.1832(1) Å c = 8.1215(1) Å; β = 115.03(1)° for [Pb]. Raman and Infrared spectroscopic study was used to obtain further structural information about the nature of bonding in selected compositions.     

The Raman spectra of serine and 3,3-dideutero-serine in aqueous solution

The Raman spectra of serine [α-amino-β-hydroxypropionic acid; HOCH₂CH(NH₃)⁺COO⁻] and 3,3-dideutero-serine [HOCD₂CH(NH₃)⁺COO⁻] in aqueous solution were studied in the range 4000–300 cm⁻¹. The data obtained for the deuterated compound are novel and provide compelling evidence that previously reported assignments for the undeuterated amino acid should be revised.     

DFT study of the IR and Raman spectra of a fluorescent dendron built from cyclotriphosphazene core

Combined experimental and theoretical studies on molecular structure of the zero generation dendron, built from the hexafunctional cyclotriphosphazene core, with five OC₆H₄(CH₂)₂NHSO₂C₁₀H₆N(CH₃)₂ terminal groups and one oxybenzaldehyde group G₀ are reported. The Fourier transform Raman and IR spectra of G₀ have been recorded. Conformations of low energy isomers of G₀ have been studied at quantum-chemical level. The optimized geometry has been calculated by density functional (DFT) method at the PBE/TZ2P level of theory. The theoretical geometrical parameters, harmonic vibrational frequencies, IR intensities and Raman scattering activities are predicted in a good agreement with the experimental data. It was found that dendron molecule G₀ has a concave lens structure with planar OC₆H₄CHO fragments and slightly non-planar cyclotriphosphazene core. Relying on DFT calculations the bands of the core and terminal groups were assigned. The frequencies of ν(NH) bands in the IR spectrum reveal the presence of the H-bonds in the dendron.     

Nitrogen- and oxygen-bridged bidentate phosphaalkene ligands

An overview is given on synthesis and structures of new bidentate phosphaalkene ligands [(RMe₂Si)₂CP]₂E (E = O, NR, N^?) and (RMe₂Si)₂CPN(R′)PR′′₂. Exceptional properties of these ligands, extending beyond predictable properties of phosphaalkenes are: (i) the NSi bond cleavage of [(iPrMe₂Si)₂CP]₂NSiMe₃ with Au^I and Rh^I chloro complexes under mild conditions leading to binuclear complexes of the 6π-delocalised imidobisphosphaalkene anion [(iPrMe₂Si)₂CP]₂N^?, and (ii) the chlorotropic formation of molecular 1:2 Pd^II and Pt^II metallochloroylid complexes with novel ylid-type ligands [(RMe₂Si)₂CP(Cl)N(R)PR₂]^?, and the transformation of a P-platina-P-chloroylid complex into a C-platina phosphaalkene by intramolecular chlorosilane elimination. Properties of the heavier congeners [(RMe₂Si)₂CP]₂E (E = S, Se, Te, PR, P^?, As^?) and (RMe₂Si)₂CPEPR′′₂ (E = S, Se, Te) are also described.     

Mechanism of rhodium(III)-catalyzed formal C(sp3)H activation/spiroannulation of α-arylidene pyrazolones with alkynes: A computational study

DFT calculations were performed to investigate the rhodium-catalyzed formal C(sp³)-H activation/ spiroannulation of α-arylidene pyrazolones with alkynes. The calculations indicate that the spiroannulation through the proposed C-C reductive elimination is kinetically unfeasible. Instead, the C-C coupling from the eight-membered rhodacycle was proposed to account for the experimental results     

Continous gradient temperature Raman Spectroscopy identifies flexible sites in proline and alanine peptides

Continuous gradient temperature Raman spectroscopy (GTRS) applies the temperature gradients utilized in differential scanning calorimetry (DSC) to Raman spectroscopy, providing a straightforward technique to identify molecular rearrangements that occur near phase transitions. Herein we apply GTRS and DSC to the solid dipeptides Ala-Pro, Pro-Ala, and the mixture Ala-Pro/Pro-Ala 2:1. A simple change in residue order resulted in dramatic changes in thermal stability and properties. Characteristic Pro vibrations were observed at ∼75 °C higher temperature in Pro-Ala than Ala-Pro. The appearance/disappearance of characteristic vibrational modes with increasing temperature showed that a double peak in the Ala-Pro major phase transition (174–184 °C) was due to a gauche to anti 165° rotation of H₃CC*NH₃ about C*. CH₂ rocking and wagging frequencies present in Pro-Ala were not observed in Ala-Pro. For Ala-Pro, the Ala ⁺NH_3, and Pro COO⁻ sites were flexible whereas the Pro ring moiety was not; since the OCN (C)₂ amide bond is planar the CNC moiety keeps the Pro ring rigid. For Pro-Ala, CH₂ sites in the Pro ring were flexible and the OCNH amide bond is perpendicular to the Pro ring. Since the mass of the Pro ring is significantly larger than the mass of the flexible Ala ⁺NH₃ moiety, Pro-Ala absorbs more thermal energy, corresponding to a higher phase transition temperature (240–260 °C). Ala-Pro, Pro-Ala, and Ala-Pro/Pro-Ala 2:1 exhibited α-helix, β-sheet, α-helix secondary structure conformations, respectively.     

Structural properties of montmorillonite intercalated with tetraalkylammonium cations—Computational and experimental study

Several tetraalkylammonium (TAA) cations intercalated in layered clay mineral montmorillonite were studied by a combination of theoretical approach based on density functional theory (DFT) and infrared spectroscopy. DFT calculations revealed positions of TAA cations in the interlayer space and a dependence of d₀₀₁ parameter on the cation size. A finite difference method and molecular dynamic simulations were used to analyze and interpret vibrational modes observed in the experimental spectra with a specific focus on the CH₃ and CH₂ stretching modes. MD simulations on the tetraethylammonium-montmorillonite (TEA-M) model showed a high sensitivity of the position of the stretching vibrations of the CH₃ and CH₂ groups on the d₀₀₁ value. MD calculations also helped to distinguish vibrations of the parallel and perpendicular CH₃ groups of the tetramethylammonium-montmorillonite (TMA-M) which was not possible from the experimental infrared spectra because of many overlapping broad bands.     

CuLn complexes with a single μ-oximato bridge

Two original dinuclear (LnYb, 3 and LnEr, 4) and one trinuclear Cu^IILn^IIICu^II (LnGd, 5) complexes derived from a polydentate non symmetrical Schiff base ligand H₂L have been prepared. The ligand possesses two functions (phenol and oxime) able to coordinate the Ln ions, but structural studies (X-ray diffraction and powder X-ray diffraction) show that the Cu^II and Ln^III ions are only bridged by the oximato (NO) pair. The missing phenoxo bridge is replaced by a surprising pseudo-bridge involving one oxygen atom of the nitrato anion linked to the Cu and Ln ions according to a η²: η¹: μ mode. Although this latter contact has no role from the magnetic point of view, it introduces a large deformation of the unique bridging network. The CuYb complex 3 and the trinuclear CuGdCu complex 5 present antiferromagnetic interactions, with a J_CuGd interaction equal to ?1.25 cm^?1 in 5. The genuine single bridge can be considered as responsible for the antiferromagnetic character of the interaction.     

Structural,Hirshfeld surface and spectroscopic studies of the noncentrosymmetric 1-ethylpiperazinediium pentachloroantimonate (III) monohydrate

1-Ethylpiperazinediium pentachloroantimonate (III) monohydrate, C₆H₁₆N₂SbCl₅·H₂O, has been synthesized by the reaction of antimony trioxide (Sb₂O₃) and 1-ethylpiperazine in an aqueous solution of hydrochloric acid. The structure crystallizes in orthorhombic system, in the non-centrosymmetric space group Pca2₁ and consists of isolated [C₆H₁₆N₂]²⁺ cations, square pyramidal [SbCl₅]²⁻ anions and lattice water molecules. OH⋯Cl hydrogen bonds link the [SbCl₅]²⁻ anions and water molecules to form double chains stretching along the [101] direction. The chains in turn are linked to the organic cations via NH⋯Cl, CH⋯Cl, CH⋯O and NH⋯O hydrogen bonds to form a three-dimensional network. This structure presents an example of a general square pyramidal complex ion containing a stereo-chemically active lone pair of electrons. Solid state ¹³C and ¹⁵N CP-MAS NMR spectra are in agreement with the X-ray structure, and vibrational absorption bands were identified by infrared spectroscopy. DFT calculations allowed the attribution of the NMR peaks and IR absorption bands. The interactions variability of the two independent cations and ten chloride atoms is analyzed via Hirshfeld surface analysis.     

The crystal and molecular structures of the compounds [(η5-C5H5)Fe(CO)2]2(CH2)n, where 0 n = 3 and 4

The crystal stuctures of [(η⁵-C₅H₅)Fe(CO)₂]₂(CH₂)_n, n = 3 and 4, have been determined.[(η⁵-C₅H₅)Fe(CO)₂]₂(CH₂)₃: a = 21.20, b = 10.39, c = 7.88Å, β = 101.6°, U = 1699ų, C2/c, Z = 4, R = 0.059, 1036 observed data.[(η⁵-C₅H₅)Fe(CO)₂]₂(CH₂)₄: a = 7.63, b = 10.54, c = 21.87Å, β = 96.4°, U= 1748ų, P2₁/c, Z = 4, R = 0.051, 1418 observed data.In each compound the iron atoms are joined by simple chains of sigma bonded CH₂ groups. Bond lengths are similar in both: mean Fe-CO 1.75, C-O 1.15, FeC(cp) 2.11, FeCH₂ 2.08, (cp)CC(cp) 1.41, CH₂CH₂ 1.55Å. The (CH₂)₃ compound retains a 2-fold axis of symmetry in the crystal. The (CH₂)₄ compound has no imposed symmetry, but closely approximates centrosymmetry. The effects of molecular symmetry on the IR spectrum between 2100 and 1900 cm^-1 are discussed. The¹³C and₁H (270 MHz) NMR spectra in solution are shown to be consistent with the structures found crystallographically.     

Exploring the activities of vanadium,niobium, and tantalum PNP pincer complexes in the hydrogenation of phenyl-substituted CN,CN, CC,CC, and CO functional groups

The structures and stability of the designed PNP pincer amido M(NO)₂(PNP) and amino ^HM(NO)₂(PN^HP) complexes [M = V, Nb, and Ta, PNP = N(CH₂CH₂P(isopropyl)₂)₂, PN^HP = HN(CH₂CH₂P(isopropyl)₂)₂] and their hydrogenation mechanisms for phenyl-substituted unsaturated functional groups have been explored at the B3PW91 level of density functional theory. Under H₂ environment, these conjugated complexes can form equilibrium and fulfill the criteria of metal–ligand cooperated bifunctional hydrogenation catalysts. For the hydrogenation of Ph-CN, Ph-CHNH, Ph-CHNH-Ph, Ph-CHNCH₂Ph, Ph-CCH, Ph-CHCH₂, Ph-CHO, and Ph-COCH₃, the reaction prefers either a two-step or one-step mechanism for the hydridic MH and protonic NH transfer. These results clearly show that the V, Nb, and Ta complexes are promising catalysts for the hydrogenation reactions, and these provide experimental challenges.     

Neutron diffraction structure determination of the high-temperature form of lithium tritantalate,HLiTa3O8

The crystal structure of HLiTa₃O₈ has been reexamined by electron and neutron diffraction techniques. Neutron Weissenberg and electron diffraction photographs show that the space group of the compound isPmmn and notPmma as determined previously by X-ray diffraction techniques. There are eight molecules in the unit cell of lattice parametersa = 16.718(2)A?,b = 7.696(1)A?,c = 8.931(1)A?. These values show that thebaxis of the new cell is doubled with respect to the parameter measured by X-rays. The structural refinement was based on 1074 independent reflections measured on a single crystal with a four-circle neutron diffractometer. The positions of all atoms, including the lithium atoms have been determined. The finalR andwRfactors were 0.036 and 0.035, respectively. The eight lithium cations occupy two sets of4fpositions(x,¼, z)of thePmmn space group. The ordering of four lithium ions over two sets of possible positions (4j) of space groupPmma is responsible for the doubling of theb axis. The other four Li⁺ occupy two sets of positions (2d) of space groupPmma. All lithium ions are surrounded by 12 oxygen atoms arranged as cuboctahedra. The large thermal vibrations found for the lithium atoms and the ionic conductivity of HLiTa₃O₈ at high temperatures are consistent with weak LiO bonding.     

Magnetic properties of ammonia intercalates of some IV B and V B transition metal disulfides

Intercalates 3RVS₂NH₃ and 3RTaS₂NH₃, isostructural with 3RTiS₂NH₃, are described for the first time. Magnetic properties of 3RTiS₂NH₃, 3RVS₂NH₃, and 2HTaS₂NH₃ respectively are interpreted in terms of a charge transfer (in agreement with an ionic model) from the intercalant to the lowest conduction band which consists mainly ofe_g, a_1g anda′₁ transition metald states.     

Mechanism of thermal energy charge transfer reactions: rare gas ions reacting with NH3 and PH3

Absolute rate constants and approximate product distributions are presented for the reactions of He⁺, Ne⁺, Ar⁺, Kr⁺, Xe⁺, CO⁺ and CO⁺₂ with NH₃ and PH₃. In all cases, electron transfer is the dominant reaction channel. Hydrogen atom transfer is observed in several systems, but only as a minor product, even when this channel is very exothermic. The magnitude of the absolute rate constants can be correlated with the Franck-Condon factors associated with the reactions in most cases. Several exceptions to this general rule are observed that could not be readily predicted a priori. It is speculated that these reactions proceed via a collision complex.     

Reactions of palladium (II) chloride with 1,4 - diphenyl - 2,3 - dimethyl - 1,4 - diazabutadiene and 1,4-DI(p-methoxyphenyl)-2,3-dimethyl- 1,4 - diazabutadiene

The reactions of palladium(II) chloride with 1,4 - diphenyl - 2,3 - dimethyl - 1,4 - diazabutadiene and 1,4 - di(p - methoxyphenyl) - 2,3 - dimethyl - 1,4 - diazabutadiene are described. With 1,4 - diphenyl - 2,3 - dimethyl - 1,4 - diazabutadiene diimine fission is produced, giving rise to a product identified by elemental analysis, IR and Raman spectra, and X-ray diffraction, as trans-dichlorobis(aniline) palladium(II). The complex is soluble in dimethylformamide and crystallizes with two molecules of solvent. The substance crystallizes in the monoclinic space group P2₁/n. The X-ray data were refined to R = 0.047 and R_w = 0.046. Final distances are PdN = 2.060(5)Åand PdC1 = 2.299(2)Å. There are two bifurcated intermolecular NH ... C1 and CH... C1 hydrogen bonds which, together with one more intermolecular hydrogen bond NH... O, are responsible for the packing of the molecules. However, when 1,4 - di(p - methoxyphenyl) - 2,3 - dimethyl - 1,4 - diazabutadiene was treated with palladium chloride under the same conditions cis - dichloro - 1,4 - di(p - methoxyphenyl) - 2,3 - dimethyl - 1,4 - diazabutadiene was formed, as deduced from elemental analysis, and IR and Raman spectra.     

The Crystal and Molecular Structure of Bis(cyclopentadienyldicarbonylchromium) (CrCr)

The crystal structure of bis(cyclopentadienyldicarbonyl-chromium) has been determined by x-ray diffraction. The compound crystalizes in the triclinic system, space group P1¯(C¹_i, No. 2) with unit cell parameters: a, 7.829(3); b, 14.543(6); c, 6.588(2)Å; α, 94.67(3), β, 110.70(3); γ, 104.04°(3); V, 699.1(4)ų; z=2. There are two independent molecules per unit cell located at the inversion centers at O,O,O and O, 1/2, O. The CrCr bond distances are, respectively 2.200(3) and 2.230(3), thus supporting their formulation as triple bonds. The CpCrCr angles in the two molecules are 165.0° and 158.7°, respectively. The structural features are compared with those of Cp₂Mo₂(CO)₄, which has a linear CpMoMoCp axis; and the differences rationalized in terms of electronic interactions of the Cp-ligand with the orbitals of the M₂ unit. The differences observed in the structures of the two independent molecules are also related to the proposed bonding model and to packing considerations.