A novel binuclear copper complex incorporating a nalidixic acid derivative displaying a one‐dimensional coordination polymeric structure

The identification of the antibacterial action of nalidixic acid (nx) was central to the development of the quinolone antibacterial compounds. The ability of the nx naphthyridyl ring to interact with and inhibit some proteins has encouraged the investigation of similar structures in the search for more active compounds with less adverse effects. The possibility of structural modification by attachment of other biologically active moieties to the naphthyridyl ring of nx allowed the development of new active antimicrobial molecules. Hydrazone derivatives of nx can be synthesized easily based on the condensation of the hydrazide derivative of nx with the desired aldehyde or ketone. Only a few complexes with nx hydrazone derivatives have been described but for none were the crystal structures elucidated. The synthesis of a new one‐dimensional Cu^II coordination polymer, namely catena‐poly[[copper(II)‐di‐μ‐chlorido‐copper(II)‐{μ‐1‐ethyl‐N′‐[(1H‐imidazol‐4‐yl)methylidene]‐7‐methyl‐4‐oxo‐1,4‐dihydro‐1,8‐naphthyridine‐3‐carbohydrazidato}‐[dimethanolcopper(II)]‐{μ‐1‐ethyl‐N′‐[(1H‐imidazol‐3‐yl)methylidene]‐7‐methyl‐4‐oxo‐1,4‐dihydro‐1,8‐naphthyridine‐3‐carbohydrazidato}] dichloride methanol tetrasolvate], {[Cu₃(C₁₆H₁₅N₆O₂)₂Cl₂(CH₃OH)₂]Cl₂·4CH₃OH}_n, with the (1H‐imidazol‐4‐yl)methylidene carbohydrazide derivative of nalidixic acid (denoted h4imi), is presented and its structure is compared to the density functional theory (DFT) optimized structure of free h4imi. The title structure presents an octahedral Cu^II ion on an inversion centre alternating along a polymer chain with a square‐pyramidal Cu^II ion, with the two Cu^II centres bridged by two chloride ligands. Hydrogen bonds involving chloride counter‐ions and methanol solvent molecules mediate the three‐dimensional packing of the polymer. Comparison of the geometrical results from the structure analysis with those derived from a DFT study of the free ligand reveal the differences that arise upon coordination.     

Poly[[μ‐(1‐azaniumylethane‐1,1‐diyl)bis(hydrogen phosphonato)]sodium]: a powder X‐ray diffraction study

The title two‐dimensional coordination polymer, [Na(C₂H₈NO₆P₂)]_n, was characterized using powder X‐ray diffraction data and its structure refined using the Rietveld method. The asymmetric unit contains one Na⁺ cation and one (1‐azaniumylethane‐1,1‐diyl)bis(hydrogen phosphonate) anion. The central Na⁺ cation exhibits distorted octahedral coordination geometry involving two deprotonated O atoms, two hydroxy O atoms and two double‐bonded O atoms of the bisphosphonate anion. Pairs of sodium‐centred octahedra share edges and the pairs are in turn connected to each other by the biphosphonate anion to form a two‐dimensional network parallel to the (001) plane. The polymeric layers are connected by strong O—H...O hydrogen bonding between the hydroxy group and one of the free O atoms of the bisphosphonate anion to generate a three‐dimensional network. Further stabilization of the crystal structure is achived by N—H...O and O—H...O hydrogen bonding.<!?tpb=18.7pt>     

One Dimensional Coordination Polymer Constructed by 1,2-Bis(4-pyridinecarboxamido)ethane and Copper(II)

IntroductionInrecentyears ,thesynthesisandcharacterizationofco ordinationpolymershavebeenrapidlyexpandingowingtoafundamentalinterestintheirfascinatingstructuraldiversityandpotentialapplicationsasfunctionalmaterials .1 4 Thesyn thesisofcoordinationpolymerswith 4 ,4′ bipyridine (4 ,4′ bipy)orrelatedspeciesasbifunctionalligandandmetalionhasgeneratedaconsiderablenumberofnoveltopologicalframeworks ,suchasT shaped ,5ladder,6 brickwall,7squareorrectangulargrid8,9andotheruncommonmotifs .Herewereport…     

The interaction of a novel ruthenium (II) complex with self‐assembled DNA film on silicon surface

Calf thymus DNA (ct‐DNA) films were immobilized onto patterned silicon wafers through electrostatic self‐assembly technology and interacted with a novel dinuclear ruthenium (II) complex, [(bpy)₂Ru(H₂bpi)Ru(bpy)₂](ClO₄)₄, which were demonstrated by using a confocal optical microscope. The morphology of the DNA film was measured by atomic force microscopy and the results show that the DNA strands have been folded into coiled conformations and aggregated into circles with diameters between 18 and 55 nm. The interaction process was also monitored by UV‐visible and fluorescence spectra and investigated by X‐ray photoelectron spectra. The results show that the Ru (II) complex interacts with ct‐DNA by the intercalative mode as it behaves in aqueous solutions. Copyright © 2006 John Wiley & Sons, Ltd.     

Synthesis,structural characterization and computational studies of catena‐poly[chlorido[μ3‐(pyridin‐1‐ium‐3‐yl)phosphonato‐κ3O:O′:O′′]zinc(II)]

Coordination polymers are constructed from two basic components, namely metal ions, or metal‐ion clusters, and bridging organic ligands. Their structures may also contain other auxiliary components, such as blocking ligands, counter‐ions and nonbonding guest or template molecules. The choice or design of a suitable linker is essential. The new title zinc(II) coordination polymer, [Zn(C₅H₅NO₃P)Cl]_n , has been hydrothermally synthesized and structurally characterized by single‐crystal X‐ray diffraction and vibrational spectroscopy (FT–IR and FT–Raman). Additionally, computational methods have been applied to derive quantitative information about interactions present in the solid state. The compound crystallizes in the monoclinic space group C 2/c . The four‐coordinated Zn^II cation is in a distorted tetrahedral environment, formed by three phosphonate O atoms from three different (pyridin‐1‐ium‐3‐yl)phosphonate ligands and one chloride anion. The Zn^II ions are extended by phosphonate ligands to generate a ladder chain along the [001] direction. Adjacent ladders are held together via N—H…O hydrogen bonds and offset face‐to‐face π–π stacking interactions, forming a three‐dimensional supramolecular network with channels. As calculated, the interaction energy between the neighbouring ladders is −115.2 kJ mol⁻¹. In turn, the cohesive energy evaluated per asymmetric unit‐equivalent fragment of a polymeric chain in the crystal structure is −205.4 kJ mol⁻¹. This latter value reflects the numerous hydrogen bonds stabilizing the three‐dimensional packing of the coordination chains.     

A ruthenium(II) complex of bis (1-pyrazolyl) borate

A new neutral ruthenium(II) complex of dihydro-bis(1-pyrazolyl) borate is synthesised by the reaction of RuCl₂(PPh₃)₃ with the ligand in methanol and is characterised on the basis ofir and³¹P{¹H}nmr spectra.     

One Dimensional Coordination Polymer Constructed by1,2—Bis（4—pyridinecarboxamido）ethane and Copper（Ⅱ）

The ligand [1,2‐bis(4‐pyridinecarboxamido)ethane] (L) and the coordination polymer |[Cu(L)₂(H₂O)]‐(NO₃)₂·6H₂O|·(1) haw been synthesized and characterized by ER and ¹H NMR spectra. Their molecular structures and the packing of 1 have been determined by single‐crystal X‐ray diffraction analysis. The Cu(n) in 1 is bridged by two ligands forming an infinite one‐dimensional chain like structure and L in 1 adopts a different conformation from its free state. 1 belongs to monoclinic, space group P2₁/n, a = 1.2896(3) nm, b = 1.2552(8) nm, c = 2.2903(19) nm, β = 93.04(5)°, Z = 4, V = 3.702(4) nm³. The TG and DTG experiments showed that the uncoordinated H₂O can be removed at low temperature by heating, and it does not decompose until 250 °C.     

A new copper(II) coordination polymer containing chains of interconnected paddle‐wheel antiferromagnetic clusters

The construction of supramolecular architectures based on inorganic–organic coordination frameworks with weak noncovalent interactions has implications for the rational design of functional materials. A new crystalline binuclear copper(II) one‐dimensional polymeric chain, namely catena‐poly[[[tetrakis(μ‐4‐azaniumylbutanoato‐κ²O :O ′)dicopper(II)(Cu —Cu )]‐μ‐chlorido‐[diaquadichloridocopper(II)]‐μ‐chlorido] bis(perchlorate)], {[Cu₃Cl₄(C₄H₉NO₂)₄(H₂O)₂](ClO₄)₂}_n , was obtained by the reaction of 4‐aminobutyric acid (GABA) with CuCl₂·2H₂O in aqueous solution. The structure was established by single‐crystal X‐ray diffraction and was also characterized by IR spectroscopy and magnetic measurements. The crystal structure consists of [{Cu₂(GABA)₄}{CuCl₄(H₂O)₂}]⁺ cations and isolated perchlorate anions. Two symmetry‐related Cu^II centres are bridged via carboxylate O atoms into a classical paddle‐wheel configuration, with a Cu…Cu distance of 2.643 (1) Å, while bridging Cl atoms complete the square‐pyramidal geometry of the metal atoms. The Cl atoms connect the paddlewheel moieties to a second Cu^II atom lying on an octahedral site, resulting in infinite helical chains along the c axis. The packing motif exhibits channels containing free perchlorate anions. The crystal structure is stabilized by hydrogen bonds between the perchlorate anions, the coordinated water molecules and the ammonium groups of the polymeric chains. The magnetic analysis of the title compound indicates a nontrivial antiferromagnetic behaviour arising from alternating weak–strong antiferromagnetic coupling between neighbouring Cu^II centres.     

Synthesis,structure and characterization of two copper(II) supramolecular coordination polymers based on a multifunctional ligand 2‐amino‐4‐sulfobenzoic acid

Copper(II) coordination polymers have attracted considerable interest due to their catalytic, adsorption, luminescence and magnetic properties. The reactions of copper(II) with 2‐amino‐4‐sulfobenzoic acid (H₂asba) in the presence/absence of the auxiliary chelating ligand 1,10‐phenanthroline (phen) under ambient conditions yielded two supramolecular coordination polymers, namely (3‐amino‐4‐carboxybenzene‐1‐sulfonato‐κO¹)bis(1,10‐phenanthroline‐κ²N,N′)copper(II) 3‐amino‐4‐carboxybenzene‐1‐sulfonate monohydrate, [Cu(C₇H₆N₂O₅S)(C₁₂H₈N₂)₂](C₇H₆N₂O₅S)·H₂O, (1), and catena‐poly[[diaquacopper(II)]‐μ‐3‐amino‐4‐carboxylatobenzene‐1‐sulfonato‐κ²O⁴:O^4′], [Cu(C₇H₆N₂O₅S)(H₂O)₂]_n, (2). The products were characterized by FT–IR spectroscopy, thermogravimetric analysis (TGA), solid‐state UV–Vis spectroscopy and single‐crystal X‐ray diffraction analysis, as well as by variable‐temperature powder X‐ray diffraction analysis (VT‐PXRD). Intermolecular π–π stacking interactions in (1) link the mononuclear copper(II) cation units into a supramolecular polymeric chain, which is further extended into a supramolecular double chain through interchain hydrogen bonds. Supramolecular double chains are then extended into a two‐dimensional supramolecular double layer through hydrogen bonds between the lattice Hasba⁻ anions, H₂O molecules and double chains. Left‐ and right‐handed 2₁ helices formed by the Hasba⁻ anions are arranged alternately within the two‐dimensional supramolecular double layers. Complex (2) exhibits a polymeric chain which is further extended into a three‐dimensional supramolecular network through interchain hydrogen bonds. Complex (1) shows a reversible dehydration–rehydration behaviour, while complex (2) shows an irreversible dehydration–rehydration behaviour.     

1,3-Bis(2-alkyltetrazol-5-yl)triazenes and their Fe(II), Co(II) and Ni(II) complexes: Synthesis,spectroscopy, and thermal properties. Crystal structure of Fe(II) and Co(II) 1,3-bis(2-methyltetrazol-5-yl)triazenide complexes

Complexes ML¹₂ and ML²₂, with M = Fe^II, Co^II, Ni^II, and 1,3-bis(2-R-tetrazol-5-yl)triazenide ligands L¹ (R = Me) and L² (R = ^tBu), have been synthesized by the reaction of corresponding 1,3-bis(2-R-tetrazol-5-yl)triazenes with metal(II) salts in basic media and characterized by IR, UV–Vis spectroscopy, thermal and X-ray diffraction analyses. Both 1,3-bis(2-R-tetrazol-5-yl)triazenes were found to deprotonate on coordination and act as tridentate chelating ligands forming distorted MN₆ octahedra around metal(II) cations.     

A mixed chloride/trifluoromethanesulfonate ligand species in a ruthenium(II) complex

The compound [2‐(aminomethyl)pyridine‐κ²N,N′][chlorido/trifluoromethanesulfonato(0.91/0.09)][(10,11‐η)‐5H‐dibenzo[a,d]cyclohepten‐5‐amine‐κN](triphenylphosphane‐κP)ruthenium(II) trifluoromethanesulfonate dichloromethane 0.91‐solvate, [Ru(CF₃SO₃)_0.09Cl_0.91(C₆H₈N₂)(C₁₅H₁₃N)(C₁₈H₁₅P)]CF₃SO₃·0.91CH₂Cl₂, belongs to a series of Ru^II complexes that had been tested for transfer hydrogenation, hydrogenation of polar bonds and catalytic transfer hydrogenation. The crystal structure determination of this complex revealed disorder in the form of two different anionic ligands sharing the same coordination site, which other spectroscopic methods failed to characterize. The reduced catalytic activity of the title compound was not fully understood until the crystallographic data provided evidence for the mixed ligand species. The crystal structure clearly shows that the majority of the synthesized material has a chloride ligand present. Only a small portion of the material is the expected complex [Ru^II(OTf)(ampy)(η²‐tropNH₂)(PPh₃)]OTf, where OTf is triflate or trifluoromethanesulfonate, ampy is 2‐(aminomethyl)pyridine and tropNH₂ is 5H‐dibenzo[a,d]cyclohepten‐5‐amine.     

A one‐dimensional cobalt(II) coordination polymer based on 2,4′‐oxydibenzoic acid: poly[[[diaquabis[2‐(4‐carboxyphenoxy)benzoato‐κO1]cobalt(II)]‐μ‐4,4′‐bipyridine‐κ2N:N′] dihydrate]

The reaction of CoSO₄ with 2,4‐oxydibenzoic acid (H₂oba) and 4,4′‐bipyridine (bipy) under hydrothermal condition yielded a new one‐dimensional cobalt(II) coordination polymer, {[Co(C₁₄H₉O₅)₂(C₁₀H₈N₂)(H₂O)₂]·2H₂O}_n, which was characterized by elemental analysis, IR spectroscopy, thermogravimetric analysis, magnetic properties and single‐crystal X‐ray diffraction. The Co^II ions are connected by bipy ligands into infinite one‐dimensional chains. The Hoba⁻ ligands extend out from the two sides of the one‐dimensional chain. O—H...O hydrogen bonding extends these chains into a two‐dimensional supramolecular architecture.     

Synthesis of new ruthenium(II) complexes derived from labile nitrile ligands: an alternative route to the preparation of trans-dichlorotetrakis(diphenylphosphine)ruthenium(II)

New ruthenium(II) complexes containing labile nitrile ligands have been prepared by treatment of either the polymer [{RuCl₂(COD)}_x] (COD = cycloocta-1,5-diene) (1) or its derivative [RuCl₂(COD)(NCCH₃)₂]·NCCH₃ (2) with the appropriate nitrile ligands in refluxing acetonitrile under argon. A new route to synthesis of trans-dichlorotetrakis(diphenylphosphine)ruthenium(II) (7) was also reported. A redetermination of the structure of 7 was undertaken and X-ray crystallographic data revealed that the complex crystallizes in the triclinic space group P-1 with unit cell dimensions a = 12.7016(9) Å, b = 13.0847(10) Å, c = 14.1498(10) Å, α = 101.46(3)°, V = 2080.6(3) Å³, Z = 2 and R = 0.0309. Its polymorph 7′ was also obtained. The crystal structure of 4 was also determined. This complex crystallizes in the monoclinic space group C2/c with unit cell dimensions a = 27.0510(3) Å, b = 11.0984(13) Å, c = 13.0450(16) Å, α = 90°, V = 3886.5(8) Å³, Z = 8 and R = 0.0282.     

Synthesis and Crystal Structure of a New Diamine Complex CuC14（H2tn）

In an attempt to synthesize a new pyrimidine complex of copper(H) in a solution reaction of CuBr2 with 2,2‘-bis(hexahydropydmidine) and hydro-chloric acid, we unexpectedly obtained a bright yellow chip-like crystal of CuCl4(H2tn) [H2tn=(H3NCH2CH2CH2NH3)^2 ]. Its structure was determined by single-crystal X-ray diffraction analysis. The crystal belongs to orthorhombic system, space group Pnma, with cell parameters: a=0.7216(2)nm, b=1.8308(6)nm, c=0.7553(3)nm, V=0.9953(6)nm^3, Z=4, F(000)=564, Mr=281.49, Dc=1.879 g/cm^3. u(Mo Ka)=3.204 mm^-1, R1=0.0248, wR2=0.0575. The analysis of the crystal structure indicates that the complex has a three-dimensional network structure, which is formed by hydrogen bonds and electrostatic interaction.     

Synthesis and characterization of Co(II), Ni(II), Zn(II) and Cu(II) complexes with a new tetraazamacrocyclic Schiff base ligand containing a piperazine moiety: X-ray crystal structure determination of the Co(II) complex

Two macrocyclic Schiff base ligands, L¹ [1+1] and L² [2+2], have been obtained in a one-pot cyclocondensation of 1,4-bis(2-formylphenyl)piperazine and 1,3-diaminopropane. Unfortunately, because of the low solubility of both ligands, their separation was unsuccessful. In the direct reaction of these mixed ligands (L¹ and L²) and the appropriate metal ions only [CoL¹(NO₃)]ClO₄, [NiL¹](ClO₄)₂, [CuL¹](ClO₄)₂ and [ZnL¹(NO₃)]ClO₄ complexes have been isolated. All the complexes were characterized by elemental analyses, IR, FAB-MS, conductivity measurements and in the case of the [ZnL¹(NO₃)]ClO₄ complex with NMR spectroscopy.     

A one‐dimensional CdII coordination polymer constructed from 4‐(dimethylamino)pyridinium‐1‐acetate ligands and thiocyanate coordination bridges

A new cadmium–thiocyanate complex, namely catena‐poly[1‐carboxymethyl‐4‐(dimethylamino)pyridinium [cadmium(II)‐tri‐μ‐thiocyanato‐κ⁴N:S;κ²S:N] [[[4‐(dimethylamino)pyridinium‐1‐acetate‐κ²O,O′]cadmium(II)]‐di‐μ‐thiocyanato‐κ²N:S;κ²S:N]], {(C₉H₁₃N₂O₂)[Cd(NCS)₃][Cd(NCS)₂(C₉H₁₂N₂O₂)]}_n, was synthesized by the reaction of 4‐(dimethylamino)pyridinium‐1‐acetate, cadmium nitrate tetrahydrate and potassium thiocyanide in aqueous solution. In the crystal structure, two types of Cd^II atoms are observed in distorted octahedral coordination environments. One type of Cd^II atom is coordinated by two O atoms from the carboxylate group of the 4‐(dimethylamino)pyridinium‐1‐acetate ligand and by two N atoms and two S atoms from four different thiocyanate ligands, while the second type of Cd^II atom is coordinated by three N atoms and three S atoms from six different thiocyanate ligands. Neighbouring Cd^II atoms are linked by thiocyanate bridges to form a one‐dimensional zigzag chain and a one‐dimensional coordination polymer. Hydrogen‐bond interactions are involved in the formation of the supramolecular network.     

Effects of L-tyrosine esters on quenching and photosensitized charge separation using polymers containing ruthenium(II) complex

A series of ruthenium(II) complex-containing partially quaternized poly(1-vinylimidazole)s with various alkyl side chains such as hexyl (C₆RuQPIm), dodecyl (C₁₂RuQPIm), and hexadecyl (C₁₆RuQPIm) were synthesized. The effects of L -tyrosine esters with hexyl (C₆Tyr), octyl (C₈Tyr), and dodecyl (C₁₂Tyr) on the quenching with methylviologen and photosensitized charge separation reactions were investigated using these metallopolymers as polymer photosensitizers. The quenching reaction took place through both a dynamic quenching process and a static quenching one mediated by the L -tyrosine esters. The kinetic parameters for these processes were obtained from a computed curve fitting using a Stern–Volmer equation derived from a combination of dynamic quenching and static quenching. The parameters had a significant dependence on the lengths of the alkyl groups in the L -tyrosine esters and the alkyl side chains on these metallopolymers. During photosensitized charge separation, the reaction proceeded through these quenching processes, referred to as direct and mediated processes. The initial rates of methylviologen radical formation also depended on these lengths; they increased when the lengths of the alkyl side chain on these metallopolymers and alkyl groups in the L -tyrosine esters were long. Such a dependence was caused by a change in the balance of some effects such as the electrostatic and steric effects. © 1999 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 37: 4360–4367, 1999     

Inducement and stabilization of G-quadruplex DNA by a thiophene-containing dinuclear ruthenium(II) complex

G-quadruplex structures are attractive targets for the development of anticancer drugs, as their formation in human telomere could impair telomerase activity, thus inducing apoptosis in cancer cells. In this work, a thiophene-containing dinuclear ruthenium(II) complex, [Ru₂(bpy)₄(H₂bipt)]⁴⁺ {bpy = 2,2′-bipyridine, H₂bipt = 2,5-bis[1,10]phenanthrolin[4,5-f]-(imidazol-2-yl)thiophene}, was prepared and the interaction between the complex and human telomeric DNA oligomers 5′-G₃(T₂AG₃)₃-3′ (HTG21) has been investigated by UV-Vis, fluorescence and circular dichroism (CD) spectroscopy, fluorescence resonance energy transfer (FRET) melting assay, polymerase chain reaction (PCR) stop assay, fluorescent intercalator displacement (FID) titrations, Job plot and color reaction studies. The results indicate that the complex can well induce and stabilize the formation of antiparallel G-quadruplex of telomeric DNA in the presence or absence of metal cations, and the ΔT_m value of the G-quadruplex DNA treated with the complex was obtained to be 12.8 °C even at levels of 50-fold molar of duplex DNA (calf-thymus DNA), suggesting that the complex exhibits higher G-quadruplex DNA selectivity over duplex DNA. The complex shows high interaction ability with G-quadruplex DNA at (1.17 ± 0.12) × 10⁷ M^?1 binding affinity using a 2:1 [complex]/[quadruplex] binding mode ratio. A novel visual method has been developed here for making a distinction between G-quadruplex DNA and duplex DNA by our ruthenium complex binding hemin to form the hemin-G-quadruplex DNAzyme.     

Structure and magnetic properties of a mixed‐ligand copper(II) complex

The hydrothermal synthesis of the novel complex poly[[μ₂‐N¹,N⁴‐bis(pyridin‐3‐yl)naphthalene‐1,4‐dicarboxamide‐κ²N³:N^3′](μ₄‐phthalato‐κ⁴O¹:O¹:O^1′:O^2′)copper(II)], [Cu(C₈H₄O₄)(C₂₂H₁₆N₄O₂)]_n, is described. With the phthalate ligand connecting neighbouring Cu^II cations, an infinite one‐dimensional chain is formed. Adjacent one‐dimensional chains are connected by the dicarboxamide ligand, forming an intriguing two‐dimensional framework. The magnetic properties and thermal stability of this complex are also described.