Quantitative analysis of fluorimated ethylchloroformate derivatives of non-protein amino acids using positive and negative chemical ionization gas chromatography-mass spectometry

The GC-MS characterization of the ethylchloroformate derivatives of amino acids in an aqueous medium has been applied to non-protein amino acids. Derivatization of non-protein amino acids using ethylchloroformate, trifluoroethanol, and pyridine produced strong [M + 1]⁺ and [M - 1]⁻ ions in positive and negative chemical ionization (CI) modes, respectively. Twenty-one out of the twenty-three non-protein amino acids studied produced detectable ion chromatograms in both ionization modes when methane was used as the CI reagent gas. Mass spectra of these non-protein amino acid derivatives showed characteristic [M - 19]⁺, [M + 1]⁺, [M + 29]⁺, and [M + 41]⁺ peaks in the positive chemical ionization mode, and [M - 1]⁻, and [M + 35]⁻ peaks in the negative chemical ionization mode. The detection limits and the linear dynamic range of trifluorethanol ethylchloroformate derivatives of non-protein amino acids were studied using positive chemical ionization. The detection limits are mostly in the femtomole range.     

Calix[4]azacrowns as ionophores for liquid?Cliquid extraction and facilitated transport of biological supramolecular complexes

The native and methyl ester amino acids have been extracted by calix[4]azacrowns 1 (1,3-[ethylene-bis-aminocarbonylmethoxy)]-p-tert-butylcalix[4]arene) and 2 (1,3-[propylene-bis-aminocarbonylmethoxy)]-p-tert-butyl-calix[4]arene) from an aqueous phase into a chloroform phase and transported through a chloroform liquid membrane as ion pairs in the presence of picrate or tropaeolin 00 as counter ions aiming their separation. The amino acids under study exhibited good extractability by calix[4]azacrowns 1 and 2. Both receptors 1 and 2 showed good extractability towards amino acids under study. The results are discussed in term of correlation of structural properties of amino acids and calix[4]azacrowns involved in experiments. In this respect, the influence of chain length of receptors upon extraction and transport of amino acids, and the nature of anions used as counter ions are evaluated.     

Synthetic routes to 2-(2-benzofuranyl)benzoic acids and their cyclization into benz[6]indeno[2,1-d]furan-10-ones

The benz[6]indeno[2,1-d]furan-10-ones 1 were prepared by the intramolecular cyclization of the 2-(2-benzofuranyl)benzoic acids, 2 , the unequivocal routes to which are described herein. Various synthetic methods to these acids were tested, as well as the methods to cyclize them.     

Synthesis of N-arylsulfonyl-2-aryl(hetaryl)aminoacetic acids

Hydrolytic transformations of 4-[2,2,2-trichloro-1-(arylsulfonylamino)-and-(ethoxycarbonylamino)ethyl]phenyloxy(or sulfanyl)acetic acids under microwave irradiation in alkaline medium involve both trichloromethyl group and ester fragment to give N-arylsulfonyl-2-[4-carboxymethyloxy(or sulfanyl)phenyl]-2-aminoacetic acids in good yields. Hydrolysis of methyl 4-[2,2,2-trichloro-1-(arylsulfonylamino)ethyl]phenyloxy(or sulfanyl)acetates without microwave activation occurs only at the ester group with quantitative formation of 4-[2,2,2-trichloro-1-(arylsulfonylamino)ethyl]phenyloxy(or sulfanyl) acetic acids. N-[2,2,2-Trichloro-1-(1-naphthyl, 2-furyl, and 1-methylindol-3-yl)ethyl]-4-chlorobenzenesulfonamides in alkaline medium under microwave irradiation were converted in 10–15 min into the corresponding N-(4-chlorophenylsulfonyl)-2-aryl-2-aminoacetic acids in preparative yields.     

Cyclopropanation of N-substituted 3-aryl-2-cyanoprop-2-enamides and derivatives of 5,5-Dimethyl-2-oxo-2,5-dihydrofuran-3-carboxylic acid and 2-oxochromene-3-carboxylic acid with bromine-containing zinc enolates

Zinc enolates derived from 1-aryl-2,2-dibromoalkanones react with N-substituted 3-aryl-2-cyanoprop-2-enamides and 5,5-dimethyl-2-oxo-2,5-dihydrofuran-3-carboxylic and 2-oxochromene-3-carboxylic acid derivatives to give, respectively, N-substituted 2-alkyl-3-aryl-2-aroyl-1-cyanocyclopropane-1-carboxamides, 6-(4-bromobenzoyl)-4,4,6-trimethyl-2-oxo-3-oxabicyclo[3.1.0]hexane-1-carboxylic acid ethyl ester and morpholide, and 1-alkyl-1-aroyl-2-oxo-1a,7b-dihydrocyclopropla[c]chromene-1a-carboxylic acids as a single geometric isomer. Treatment of 1-alkyl-1-aroyl-2-oxo-1a,7b-dihydrocyclopropa[c]chromene-1a-carboxylic acids with carboxylic acid anhydrides leads to the formation of the corresponding 9c-alkyl-1-aryl-3,4-dioxo-9b,9c-dihydro-2,5-dioxacyclopenta[2,3]cyclopropa[1,2-a]naphthalen-1-yl carboxylates.     

Stereoselective Synthesis of α-Aminonitril on Glucose Templates

Both proteinogenic and non proteinogenic α-amino acids are of particular interest as constituents of peptide factors, peptidomimetics and antibiotics for the construction of modern selective drugs. [1] Furthemore, α-amino acid derivatives are interesting building units for chiral-pool syntheses of enantiomerically pure natural products. [2] Numerous efforts in modern organic synthesis are centered on the synthesis of enantiomerically pure α-amino acids. [3] During the past three decades efficient methods of asymmetric synthesis of α-amino acids have been developed; most of them are based on electrophilic transformations of organometallic intermediates. [4] Using the concept that the chirality of the carbohydrates can be exploited for diastereoselective reactions, Kunz and his cooperator had developed a Strecker synthesis with glycosyl amines as chiral auxiliaries. [5]     

Extraction Behavior of Amino Acids by Calix[6]arene Carboxylic Acid Derivatives

A series of calixarene carboxylic acid derivatives were synthesized for the extraction of amino acids. A calix[6]arene carboxylic acid derivative showed the highest extractability to the target tryptophan ester. The main driving forcefor the complexation was the interaction between the ammonium cation of the aminoacid and the oxygen atoms of the host molecule. Stripping of amino acids was alsoaccomplished by contacting the organic solution with a fresh acidic solution. Basedon slope and Job method analyses, it was confirmed that the calix[6]arene formsa 1 : 1 complex with the amino acid ester. The structure of the complex between the calix[6]arene and the amino acid was investigated by ¹H-NMR and CD spectra. The calix[6]arene includes a guest molecule in the cavity, and the inclusion induces the asymmetrization of the host molecule. This host compound functions as a novel recognition tool for amino acids.     

Investigation of imidazo[1,2-a]benzimidazole derivatives

Esters of 1-alkyl- and 1-aralkyl-2-iminobenzimidazoline-3-acetic acids are converted to esters of 2,9-dimethylimidazo[1,2,-a]benzimidazole-3-carboxylic acid on heating with acetic anhydride. The brief action of acetic anhydride on the free iminobenzimidazolineacetic acids gives 2-oxo-2,3-dihydroimidazo[1,2-a]benzimidazoles, which are converted to 2,9-substituted 3-acetylimidazo[1,2-a]benzimidazoles on prolonged heating with acetic anhydride.See [1] for communication V.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 1, pp. 111–114, January, 1973.     

Synthesis of a new heterocyclic ring system 2,3,5,6,7,9,10,11-octahydro-lH-cyclopenta[9,H)]benzo[i,j] quinolizine-1,9-dione

Reaction of 1,2,3,4-tetrahydroquinoline (1) with different α,β-unsaturated acids in the presence of PPA has been investigated. With acrylic acid, 1 affords two compounds identified as 1-keto-benzo[i,j]quinolizine (III) and 2,3,5,6,7,9,10,1 1-octahy dro-1H-cy el open ta [9,10] benzo [i,j]-quinolizine-1,9-dione (IV). A similar reaction of 1 with a-methyl acrylic and crotonie acids gives compounds V and VI whose structures are analogous to that of IV. These were deduced from their spectral and analytical data.     

Esters of Substituted 2,3,7-Triazabicyclo[3.3.0]oct-3-ene-4-carboxylic acids and 1,2,7-Triazaspiro[4.4]non-2-ene-3-carboxylic acids in Alkylation and Acylation

Esters of substituted 2,3,7-triazabicyclo[3.3.0]oct-3-ene-4-carboxylic acids react with acetone in the presence of hydrogen chloride (bromide) affording esters of substituted 2-(1,1-dimethyl-3-oxobutyl)-2,3,7-triazabicyclo[3.3.0]oct-3-ene-4-carboxylic acids. Reactions of esters of substituted 2,3,7-triazabicyclo[3.3.0]octa-1(5),3-diene-4-carboxylic acids with 1-adamantanol in trifluoroacetic acid resulted in esters of substituted 2-(1-adamantyl)- 2,3,7-triazabicyclo[3.3.0]octa-1(5),3-diene-4-carboxylic acids.__________Translated from Zhurnal Organicheskoi Khimii, Vol. 41, No. 2, 2005, pp. 252–263.Original Russian Text Copyright © 2005 by Stepakov, Molchanov, Kostikov.     

Spontaneous Polymerization of An Amino Acid Based Amphiphile at Air/water Interface Investigated by ESI-MS and Transmission IR Spectrometry

Self-assemblies of amphiphilic molecules are proposed to play a ubiquitous role at the early stages of evolution in the formation of primitive biopolymers. [1] As regard to the significance of N-phosphoryl amino acids as a model for the co-evolution of protein and nucleic acids at the prebiotic stage, [2] amphiphilic N-phosphoryl amino acids with two hydrophobic tails were synthesized. [3]     

Dimeric capsules with a nanoscale cavity for [60]fullerene encapsulation

The acid-assisted and guest-induced formation of superstructures was achieved by the addition of haloacetic acids to a toluene solution of the resorcin[4]arene derivatives 1 and [60]fullerenes. The formation of dimeric superstructures that encapsulated a nanosized guest molecule was observed when appropriate acids, such as haloacetic acids, and suitable guest molecules, such as [60]fullerenes, were co-added to a toluene solution of cavitand 1 that has four pyridine units, whereas a complicated equilibrium between several species was detected without [60]fullerenes, and the formation of discrete superstructures was not monitored in the absence of haloacetic acids. The spectroscopic data indicate that the formed [60]fullerene-encapsulated complexes have the structure of 2. These complexes are self-assembled through pyridinium-anion-pyridinium interactions and by pi-pi and van der Waals interactions. The rate of decomplexation of 2 is estimated to be 3.1 s(-1) from a 2D exchange NMR spectrum. The [60]fullerene encapsulation process can be controlled by modifying the amounts of acids used, changing the temperature of the system, altering the ratio of acid/base, and even through varying the solvent polarity. Moreover, the fluorescence spectra show band-narrowing spectral changes and a retardation of the relaxation characteristics of isolated and isotropic [60]fullerenes, which indicates that the environmental change around [60]fullerene is induced upon its encapsulation.     

Regioselectivity and stereoselectivity of electrophilic quaternization of substituted 2-allyl(2-cyclohexen-1-yl)thionicotinic acids to thiazolo[3,2-a]pyridinium salts

The electrophilic quaternization of substituted 2-allyl(2-cyclohexen-1-yl)-thionicotinic acids proceeds regioselectively and stereoselectively as a trans process with the formation of salts of 4a,10a-cis-4,4a-trans-1,2,3,4,4a,10a-hexahydrobenzothiazolo-[3,2-a]pyridinium acids. Trihalides of thiazolo[3,2-a]-pyridinium acids exist in equilibrium with their betaine form. The formation of betaines and reactions that proceed with a change in the anionic part of thiazolo[3,2-a]pyridinium salts have virtually no effect on the conformation of the heterocyclic cation.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 2, pp. 256–263, February, 1990.     

Synthesis of novel non-natural spiro[2.3]hexane amino acids,the conformationally restricted analogs of γ-aminobutyric acid

3-Methylenecyclobutanecarboxylic acid and its methyl ester were used as the starting compounds for the synthesis of new spiro[2.3]hexane amino acids, the conformationally rigid analogs of γ-aminobutyric acid, namely, 5-aminospiro[2.3]hexanecarboxylic and 5-amino-spiro[2.3]hexanephosphonic acids, promising modulators of GABAergic cascades in the human central nervous system. The methods developed for the synthesis of the target amino acids are based on the reactions of catalytic [1+2] cycloaddition of diazoacetic and diazophosphonic esters to 3-substituted methylenecyclobutanes, as well as on a modified Curtius reaction for the transformation of a carboxy group to the amine one.     

Cyclization of 2- and 3-indolylthiobenzoic,phenylacetic and nicotinic acids and esters to novel indole-containing tetracyclic ring systems

A series of 2- and 3-indolylthio benzoic, phenylacetic and nicotinic acids or esters were cyclized under dehydrative conditions affording several tetracyclic indole-containing ketones, several of which constitute the first reported examples of novel ring systems, such as the [1]benzothiepino[2,3-b] and [3,2-b]indole and the pyrido[3′2′:5,6] and [3′4′:5,6]thiopyrano[2,3-b] and [3,2-b]indole as well as the [3′2′:5,6] and [3′4′:5,6][1,3]thiazino[3,2-a]indole ring systems.     

Heteroatomic derivatives of aziridine. 14. Reactions of 1-(carbomethoxyethyl)-, 1-[1,2-bis(carbethoxy)ethyl]-, and 1-[1,2-bis(carbomethoxy)vinyl]aziridine with thiols, 1,2-ethanedithiol,and thiolcarboxylic acids

The reactions of 1-(carbomethoxyethyl)-, 1-[1,2-bis(carbethoxy)-ethyl]-, and 1-[1,2-bis(carbomethoxy)vinyl]aziridine with thiols and thiolcarboxylic acids produce the corresponding sulfides and esters of S-substituted N-(2-mercaptoethyl) amino acids. The reaction of 1-[1,2-bis(carbethoxy)ethyl]aziridine with 1,2-ethane-dithiol results in the formation of {1,8-bis[1,2-bis(carbethoxy)-ethyl]amino}-3,6-dithiaoctane. Cyclization of the latter by condensation with phthaloyl chloride gives 9,10-benzo-8,11-dioxo-1,4-dithia-7,12-bis[1,2-bis(carbethoxy)ethyl]-7,12-diazacyclotetradec-9-ene.For report 13 see [1].Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 10, pp. 1340–1342, October, 1984.     

Helix formation of poly(phenylacetylene) derivatives bearing amino groups at the meta position induced by optically active carboxylic acids

Two novel phenylacetylene derivatives bearing diethylaminomethyl groups at the meta position on phenyl groups [3‐(N,N‐diethylaminomethyl)phenyl]acetylene ( 1 ) and [3,5‐bis(N,N‐diethylaminomethyl)phenyl]acetylene ( 2 ) were synthesized and polymerized with [Rh(nbd)Cl]₂ (nbd: norbornadiene). Both monomers gave highly cis–transoidal stereoregular polymers that exhibited an induced circular dichroism (ICD) in the UV–visible region, probably because of a prevailing one‐handed helical conformation upon complexation with optically active carboxylic acids such as mandelic acid and lactic acid. The sign of the Cotton effects reflected the absolute configuration of the chiral acids. Therefore, these polymers can be used as a novel probe for determining the configuration of chiral acids. The polymers were stable in the presence of chiral acids in solution. The poly‐ 1 complexed with chiral acids exhibited a split‐type ICD, whereas the poly‐ 2 complexed with chiral acids showed a different, non‐split‐type ICD. The ICD pattern of the poly‐ 1 /chiral acids complexes dramatically changed with an increase in the concentration of the chiral acids, thus showing a non‐split‐type ICD similar to those of the poly‐ 2 /chiral acid complexes. © 2001 John Wiley & Sons, Inc. J Polym Sci Part A: Polym Chem 39: 3180–3189, 2001     

Substituent effects on the acidity of weak acids. 1. Bicyclo[2.2.2]octane-1-carboxylic acids and bicyclo[1.1.1]pentane-1-carboxylic acids

The acidities of 3- and 4-substituted bicyclooctane-1-carboxylic acids and 3-substituted bicyclo[1.1.1]pentane-1-carboxylic acids have been calculated at the MP2/6-311++G** theoretical level. There is good agreement between the calculated and observed gas-phase acidities. The acidities of the 4-substituted bicyclooctane acids were found to be linearly dependent on the C-X bond dipoles, as expected from a field effect. The substituents had a negligible effect on the electron density at C1. The difference in acidity between 4-chlorobicyclo[2.2.2]octane-1-carboxylic acid and the parent acid (6.2 kcal/mol) is reproduced by the Kirkwood-Westheimer treatment of substituent effects on acidity, but only if the bicyclooctane ring is given an effective dielectric constant of unity. The acidities of the 3-substituted bicyclooctane acids are linearly related to the corresponding 4-substituted acids with a slope of 0.9. The acidities of the 3-substituted bicyclo[1.1.1]pentane-1-carboxylic acids are linearly related to the C-X bond dipoles for this ring system (which are different than those for the bicyclooctanes), and they are also linearly related to the acidity of the 4-substituted bicyclo[2.2.2]octanecarboxylic acids with a slope of 1.34. The larger slope is due to the smaller bridgehead-bridgehead distance in the bicyclopentane ring than in bicyclo[2.2.2]octane.     

A Novel Synthesis of β-Hydroxy-α-amino Acids

β-hydroxy-α-amino acids constitute an important class of compounds as naturally occurring amino acids and as components of many complex natural products possessing a wide range of biological activities. [1] As a consequence of the essential role played by these amino acids in the biological systems and their utility as synthetic building blocks, a number of useful strategies have been devised for their preparation. [2]     

Chiral Phosphine Ligands with Amino Acid Moieties

Abstract

Amino acids containing functionalized aromatic substituents are of considerable interest as building blocks for the syntheses and the design of new types of proteins and pharmacologically active compounds. In contrast to amino acids bearing phosphonated phenyl substituents [1], phosphinophenyl derivatives have been reported only very recently[2]. We have been able to synthesize phosphinophenyl amino acids of type 1 or 2 by nucleophilic phosphination [3] of the potassium salts of 2-and 4-fluoro-a-phenylglycine and-alanine with potassium phosphides Ph(R')PK in high yields.