Secondary structure of peptides 16th. Characterization of proteins by means of13C NMR CP/MAS spectroscopy

50.3 or 75.4 MHz¹³C NMR cross-polarization/magic angle spinning spectra of human hair, horse hair, horse hoof, parrot feather, sperm whale myoglobin, and horse heart cytochrome C were measured. The spectra of human hair and horse hair indicate nearly equal mole fractions of-sheets and-helices and a low percentage of amorphous regions, whereas horse hoof contains a higher fraction of amorphous proteins. The parrot feathers contain a small-helix fraction (ca. 10±5 %) in additon to a large-sheet fraction whereas cytochrome C contains 70–90%-helices. The spectrum of myoglobin could not interpreted in terms of defined secondary structures. The usefulness of the¹³C NMR CP/MAS spectroscopy for the characterization of proteins is compared with that of IR spectroscopy and X-ray diffraction.     

Solid-state C NMR and molecular modeling studies of acetyl aleuritolic acid obtained from Croton cajucara Benth

Solid-state ¹³C nuclear magnetic resonance (¹³C NMR) with magic-angle spinning (MAS) and with cross-polarization and magic-angle spinning (CP/MAS) spectra, and differential scanning calorimetry (DSC) techniques were used to obtain structural data from a sample of acetyl aleuritolic acid (AAA) extracted from the stem bark of Croton cajucara Benth. (Euphorbiaceae) and recrystallized from acetone. Since solid-state ¹³C NMR results suggested the presence of more than one molecule in the unitary cell for the AAA, DSC analysis and molecular modeling calculations were used to access this possibility. The absence of phase transition peaks in the DSC spectra and the dimeric models of AAA simulated using the semi-empirical PM3 method are in agreement with that proposal.     

Enzymatically Synthesized Conducting Polyaniline Nanocomposites: A Solid‐State NMR Study

Abstract

The chiral conducting polyaniline (PANI) nanocomposites [polyacrylic acid/polyaniline/(?) camphorsulphonic acid (CSA)] were synthesized using enzyme, horseradish peroxidase (HRP) in the aqueous buffer solution at pH 4.3. It appears that the enzyme HRP apart being a biocatalyst, plays an important role during the polymerization, which allows PANI to prefer a specific helical conformation whether the induced chirality in the monomer‐CSA complex is either by (+)CSA or (?)CSA. In this paper, we report, the structural characterization of these nanocomposites by solid‐state ¹³C cross‐polarization with magic angle spinning (CP/MAS) NMR techniques. The structural features of PANI in the conducting form of nanocomposite (as‐synthesized) are similar to that of enzymatically and chemically synthesized PANI. Preliminary data also suggest that some portion of nanocomposite samples are not completely doped. Dedoping of as‐synthesized PANI nanocomposite with aqueous NH₄OH shows the spectral features that of the emeraldine base form. Solid‐state ¹³C NMR data suggest that it is possible to detach PAA and CSA from PANI in the nanocomposite material.     

Investigation of the chemical modifications of beech wood lignin during heat treatment

Holocellulose, Klason lignin and milled wood lignin (MWL) of beech wood were extracted before and after heat treatment and analysed using CP MAS ¹³C NMR, ¹³C NMR, ³¹P NMR and size exclusion chromatography (SEC). Experimental results showed that the thermal treatment degrades hemicelluloses and affects lignin polymer through depolymerisation due mainly to cleavage of β-aryl-ether linkages and recondensation reactions. The spectroscopic analysis of MWL demonstrated that these recondensation reactions involved mainly guaiacyl units through formation of 5,5′-biphenolic and diarylmethane structures.Analysis of molecular weight distribution of MWL by SEC indicated that average molecular weights of heat treated milled wood lignin were lower than those of native milled wood lignin.     

Synthesis,characterization and theoretical evaluations of HMDS promoted chemoselective O-alkylation of uracils

The sodium salts of the conjugated bases of uracils undergo highly chemoselective O⁴-monoalkylation when treated with various alkyl halides in dry DMF, while the use of methyl iodide results in N¹+N³-dimethylation. Theoretical evaluations of the chemo- and regioselectivity along with X-ray crystallographic data are presented.     

The use of chemical shifts <Emphasis Type="Italic">vs.</Emphasis> coupling constants for studying tautomerism: a combined experimental and theoretical approach

When observing average NMR signals originated from a rapid equilibrium, the procedure to estimate the composition of the mixture is to use interpolation. To illustrate the difficulties of this approach, the much-studied case of the NH and OH tautomers of pyrazolinones will be reexamined. Calculated absolute shieldings and coupling constants were compared with experimental data. Although the large predominance of the OH tautomer in DMSO was confirmed, the result is a little disappointing because no consistency in the percentages was achieved using chemical shifts and coupling constants.     

Polymerization of N,N-Dimethylaminopropyl-Acrylamide Through Hydrogen Transfer Induced by the Propagation of the Polyacrolein Anion

The anionic polymerization of acrolein (AL) with N, N-dimethylamino-propylacrylamide (DMAPA) in the presence of water was investigated in tetrahydrofuran, benzene, and ethanol at 0°C in a nitrogen atmosphere. The resulting polymers were found to be essentially vinyl polymers with one DMAPA attached and an aldehyde side chain. From observations of the polymerization process by ¹H NMR, we find that polymerization was initiated by the hydroxyl anion formed in the thermodynamic equilibrium between the amine of DMAPA and water. The hydrogen transfer reaction of DMAPA was caused by the propagating poly-AL anion. On the other hand, the monomer reactivity ratios and the Q₂-e₂values of DMAPA were determined by the free-radical copolymerization of styrene (St, M₁) with DMAPA and AIBN as initiator.     

A 1H, 13C and 15N NMR study in solution and in the solid state of six N-substituted pyrazoles and indazoles

Three N-substituted pyrazoles and three N-substituted indazoles [1-(4-nitrophenyl)-3,5-dimethylpyrazole (1), 1-(2,4-dinitrophenyl)-3,5-dimethylpyrazole (2), 1-tosyl-pyrazole (3), 1-p-chlorobenzoylindazole (4), 1-tosylinda-zole (5) and 2-(2-hydroxy-2-phenylethyl)-indazole (6)] have been studied by NMR spectroscopy in solution (1H, 13C, 15N) and in the solid state (13C, 15N). The chemical shifts have been compared with GIAO/DFT calculated absolute shieldings. Some discrepancies have been analyzed.     

Synthesis, characterization, and high-performance liquid chromatographic evaluation of C14 stationary phases containing branched and unbranched alkyl groups

Reversed-phase materials with branched and unbranched alkyl groups were prepared by modifying porous, spherical silica gel in a two-step reaction—immobilization of a trifunctional alkoxysilane (3-glycidoxypropyltrimethoxysilane) on the silica surface followed by reaction with a branched and an unbranched octanoic acid. The chromatographic sorbents were characterized by solid-state ²⁹Si and ¹³C NMR spectroscopy. The chromatographic behaviour of the stationary phases was evaluated by use of a test mixture according to the Standard Reference Material 870 set from the US National Institute of Standards and Technology, in order to study the effect of branched and unbranched alkyl chains.     

On the accessibility and structure of xylan in birch kraft pulp

The structure of -(14)-xylan, both in isolated form and as a component of bleached birch kraft pulp, was studied employing CP/MAS ¹³C NMR spectroscopy. Bleached birch kraft pulp was treated with xylanases or alkali in order to distinguish between accessible and inaccessible xylan. In xylan which was alkali-extracted from bleached birch kraft pulp, the relative contents of xylose and 4-O-methylglucuronic acid were 99.4 and 0.6 weight %, respectively, and the degree of polymerization was 70. The supermolecular structure of xylan is very sensitive to the surrounding environment. All extracted xylan chains were accessible to water and methanol and the solvent molecules easily exchanged. In bleached birch kraft pulp, cellulose fibrils interact with xylan chains, causing these to adopt a conformation similar to one of the configurations observed for dry xylan. In birch pulp, about 1/3 of the xylan was found to be accessible to digestion by xylanases or extraction with 5% w/w potassium hydroxide (aq). A signal at 81.7ppm in the C-4 region of the CP/MAS ¹³C NMR spectrum of bleached birch kraft pulp originated from xylan at the accessible fibril surfaces. A portion of a broad signal at 83.5ppm reflected inaccessible xylan, which is probably present as co-aggregates with cellulose fibril aggregates.     

Synthesis and spectral characterization of some complexes of platinum(II) containing η-methyleugenol

Several complexes of the formula trans-[Pt(Meug)(Am)Cl₂], Meug: methyleugenol (4-allyl-1,2-dimethoxybenzene), a η²-coordinated olefin, and Am: ammine, methylamine, diethylamine, o-toluidine, m-toluidine, p-toluidine, o-anisidine, m-anisidine and p-anisidine have been prepared. UV, IR, Raman, ¹H NMR, ¹³C NMR and 2D NMR spectra of the complexes were recorded and analyzed.     

Solid‐state cross‐polarization magic angle spinning 13C and 15N NMR characterization of Sepia melanin,Sepia melanin free acid and Human hair melanin in comparison with several model compounds

This paper presents the high‐resolution ¹³C and ¹⁵N cross‐polarization magic angle spinning (CP/MAS) NMR spectra of three natural melanin solids: Sepia officinalis melanin, Sepia officinalis melanin free acid (MFA) and Human hair melanin. The functional group characterization of Human hair melanin by NMR is the first to date and the ¹³C CP/MAS NMR spectra reported here show improved resolution of chemically inequivalent sites. The observed spectral regions of the solid melanin samples can be assigned to the postulated structural unit of the polymer chain of Sepia MFA derived from solution‐state NMR studies. To assist in the assignment of functional groups in the spectra, the solid‐state CP/MAS NMR spectra are compared with high‐resolution ¹³C and ¹⁵N CP/MAS spectra of four model compounds, L ‐dopa, dopamine, 2‐methoxycarbonyl‐3‐ethoxycarbonyl‐4‐methylpyrrole and ethyl 5,6‐dimethoxyindole‐2‐carboxylate. To aid further in the assignment of protonated and non‐protonated carbon atoms, CP contact time dependence and non‐quaternary carbon suppression (NQS) experiments were performed on the melanin samples. The ¹⁵N CP/MAS spectra of the melanin samples confirm the presence of indole and pyrrole units in the melanin polymer chain. The NMR peaks observed in all of the melanin samples are relatively broad, presumably owing to the presence of free radicals. Electron spin resonance (ESR) data shows that all three melanin samples contain localized free radicals (g = 2.007), with the Sepia melanin containing a 10‐fold higher free radical density than Human hair melanin. Copyright © 2003 John Wiley & Sons, Ltd.     

Solid-state NMR studies of pharmaceutical solids in polymer matrices

Biodegradable drug-delivery systems can be formulated to release drug for hours to years and have been used for the controlled release of medications in animals and humans. An important consideration in developing a drug-delivery matrix is knowledge of the long-term stability of the form of the drug and matrix after formulation and any changes that might occur to the drug throughout the delivery process. Solid-state NMR spectroscopy is an effective technique for studying the state of both the drug and the matrix. Two systems that have been studied using solid-state NMR spectroscopy are presented. The first system studied involved bupivacaine, a local anesthetic compound, which was incorporated into microspheres composed of tristearin and encapsulated using a solid protein matrix. Solid-state ¹³C NMR spectroscopy was used to investigate the solid forms of bupivacaine in their bulk form or as incorporated into the tristearin/protein matrix. Bupivacaine free base and bupivacaine-HCl have very different solid-state NMR spectra, indicating that the molecules of these compounds pack in different crystal forms. In the tristearin matrix, the drug form could be determined at levels as low as 1:100 (w/w), and the form of bupivacaine was identified upon loading into the tristearin/protein matrix. In the second case, the possibility of using solid-state ¹³C NMR spectroscopy to characterize biomolecules lyophilized within polymer matrices is evaluated by studying uniformly ¹³C-labeled asparagine (Asn) in 1:250 (w/w) formulations with poly(vinyl pyrrolidone) (PVP) and poly(vinyl alcohol) (PVA). This work shows the capability of solid-state NMR spectroscopy to study interactions between the amino acid and the polymer matrix for synthetic peptides and peptidomimetics containing selective ¹³C labeling at the Asn residue.     

Structural studies of bacterial cellulose through the solid-phase nitration and acetylation by CP/MAS <Superscript>13</Superscript>C NMR spectroscopy

The solid-phase nitration and acetylation processes of bacterial cellulose have been investigated mainly by CP/MAS ¹³C NMR spectroscopy to clarify the features of these reactions in relation to the characterization of the disordered component included in the microfibrils. CP/MAS ¹³C NMR spectra of bacterial and Valonia cellulose samples are markedly changed as the nitration progresses, in a similar way to the case of cotton linters previously reported; and the relative reactivity of the OH groups in the glucose residues is found to decrease in the order of O(6)H>O(2)H>O(3)H. Moreover, the nitration rate and mode greatly depend on the concentration of nitric acid in the reaction media. At dilute and medium concentrations, the O(6)H groups in the crystalline and disordered components are subjected to nitration at nearly the same rate, indicating that these two components are distributed almost at random in the entire region of each microfibril. The preferential penetration of nitric acid into each microfibril also occurs prior to nitration at the medium concentration, resulting in an increase in the mole fraction of the disordered component. In contrast, all OH groups undergo nitration very rapidly at the higher concentration, although nitration levels off to a certain extent for O(3)H groups. In solid-phase acetylation, no regio-selective reactivity is observed among the three kinds of OH groups, which may be due to the characteristic reaction that proceeds in a very thin layer between the acetylated and nonacetylated regions in each microfibril. The almost random distribution of the disordered component in the entire region of the microfibrils is also confirmed in this solid-phase acetylation. On the basis of these results, the mechanism of the solid-phase reactions and the microfibril structure are discussed.     

Solid state N and C NMR study of dioxomolybdenum (VI) complexes of Schiff bases derived from trans-1,2-cyclohexanediamine

The ¹³C, ¹⁵N CP MAS NMR and FT-IR spectra of dioxomolybdenum (VI) complexes of trans-N,N′-bis-(R-salicylidene)-1,2-cyclohexanediamine (R=H, R=3,5-diCl, R=3,5-diBr, R=4,6-diOCH₃), trans-N,N′-bis-(2-OH-naphthylidene)-1,2-cyclohexanediamine and trans-N-(salicylidene)-N′-(2-OH-naphthylidene)-1,2-cyclohexanediamine have been measured. Comparative analysis of the NMR and IR spectra of the complexes with those of the corresponding ligands has shown that the complexation of the di-Schiff bases leads to changes in the conformation of the ligands and the charge redistribution. The asymmetric structure and non-planar structure of the complexes have been suggested.     

Synthesis,structural characterization and reactivity of copper(I)-nitrile complexes: Crystal and molecular structure of [Cu(BzCN)4][BF4]

Complexes of general formula [CuL₄][BF₄] (L = benzonitrile – PhCN 2 or phenylacetonitrile – BzCN 3) have been prepared and structurally characterized by NMR spectroscopy and X-ray crystallography. Their structure and reactivity have been compared to the well known [Cu(MeCN)₄][BF₄] (1). The ⁶³Cu line width and the ⁶³Cu chemical shift have been evaluated by varying the temperature and the concentration of the complex 2 in benzonitrile solutions. The phenylacetonitrile solutions of the complex 3 give extremely broad signals which are beyond detection. Accordingly, compound 3 has been studied by ⁶³Cu MAS NMR spectroscopy. The solution NMR data are consistent to the prevalence of dynamic equilibrium between tetra- and low-coordinated species in both complexes. The X-ray structure of 3 revealed that the copper(I) atom sits in a slightly distorted tetrahedral geometry, surrounded by four BzCN ligands.     

Molecular structure of the unusual complex of 1-piperidineacetic acid with 2,4,6-trinitrophenol studied by X-ray, FTIR and H, C and C CP MAS NMR

Crystals containing three kinds of molecules 1-piperidiniumacetate (II), 1-piperidiniumacetic acid (III) and 2,4,6-trinitrophenolate (picrate, TNP⁻), belong to the monoclinic system, space group P2₁/c and Z=4, a=12.831(3), b=26.093(5), c=7.157(1) Å, β=101.18(3)°, R=0.0758. The zwitterion molecule (II) is a double acceptor of protons from two molecules of 1-piperidiniumacetic acid (III) (N–HO, 2.735(5) Å and O–HO, 2.472(5) Å), and a donor of proton to the picrate molecule (N–HO, 2.747(5) Å). These three molecules, which have three donor centers and several acceptor groups, form hydrogen-bonded chains parallel to the z axis. The oxygen atoms inactive in these hydrogen bonds, are engaged in the C–HO short contacts, which can be treated as weak hydrogen bonds, and join the chains into a three-dimensional network. The presence of protonated 1-piperidineacetic acid (III) and its zwitterion (II) in the crystal has been confirmed by ¹³C CP MAS NMR and solid state FTIR spectra.     

Synthesis,characterization and antimicrobial activity of maltol functionalized chitosan derivatives

Chitin was isolated from prawn shell powder through demineralization and deproteinization process. Chitosan was synthesized from isolated chitin by deacetylation process and characterized by Fourier Transform Infrared (FTIR) spectra which showed close agreement with commercial chitosan. Physicochemical features such as moisture content, ash content, degree of deacetylation and molecular weight has been measured. The prepared chitosan was found to have comparatively higher molecular weight than the commercial chitosan. Functionalization of NH₂ group of chitosan with C?=?O group of maltol and ethyl maltol by refluxing equimolar quantities of respective ketones was performed. These synthesized derivatives of chitosan were characterized by their FTIR, ¹³C-Nuclear magnetic resonance (NMR) spectroscopy, elemental analysis, X-Ray Diffraction (XRD), Thermogravimetric analysis (TGA) and Differential thermal analysis (DTA) instrumental techniques. Antibacterial screening results of the synthesized chitosan and its derivatives indicate that these compounds are active against Escherichia coli bacteria.     

Synthesis, characterization and solution behaviour of phosphoryl complexes of tin tetrafluoride

The preparation and characterization of a series of octahedral complexes [SnF₄L₂] (L = (Me₂N)₃PO (1), L = (R₂N)₂P(O)F; R = Me (2); Et (3) or L = R₂NP(O)F₂; R = Me (4); Et (5)) are described. These new adducts have been characterised by multinuclear (¹⁹F, ³¹P and ¹¹⁹Sn) NMR, IR spectroscopy and elemental analysis. The NMR data particularly the ¹⁹F NMR spectra showed that the complexes exist in solution as mixtures of cis and trans isomers. The solution behaviour of the complexes studied by variable temperature NMR in the presence of excess ligand indicated that, unlike in the SnCl₄ analogues, the ligand exchange at room temperature is slow for 1–3 and fast only for 4 and 5. The metal–ligand exchange barriers in [SnF₄L₂] and [SnCl₄L₂] systems were estimated and compared. The results indicate that in addition to the difference in the Lewis acidity between SnF₄ and SnCl₄ the nature of the substituents (fluorine atoms) on the phosphorus atom of the ligand can contribute considerably to the lability of the complex obtained.     

2－氯／2－甲磺酰基－5－（2－苯基－4－喹啉基）－1，3，4－噁二唑化合物的合成及其亲核取代的研究

借处理２－羟基－５－（２－苯基－４－喹啉基）－１，３，二唑同ＰＣｌ＿５／ＰＯＣｌ＿３之间的反应合成了２－氯－５－（２－苯基－４－喹啉基）－１，３，４－二唑（３）和通过２－基－５－（２－苯基－４－喹啉基）－１，３，４－二唑的甲基化，然后氧化制得２－甲磺酰基－５－（２－苯基－４－喹啉基）－１，３，４－二唑（６）．并分别研究了３和６同胺、叠氮及肼的反应，得到２，５－二取代的二唑新衍生物．初步观察了部分化合物的抗菌活性．