Sequence‐Dependent Photocurrent Generation through Long‐Distance Excess‐Electron Transfer in DNA

Given its well‐ordered continuous π stacking of nucleobases, DNA has been considered as a biomaterial for charge transfer in biosensors. For cathodic photocurrent generation resulting from hole transfer in DNA, sensitivity to DNA structure and base‐pair stacking has been confirmed. However, such information has not been provided for anodic photocurrent generation resulting from excess‐electron transfer in DNA. In the present study, we measured the anodic photocurrent of a DNA‐modified Au electrode. Our results demonstrate long‐distance excess‐electron transfer in DNA, which is dominated by a hopping mechanism, and the photocurrent generation is sequence dependent.     

Chemical models for aspects of the photosynthetic reaction centre: synthesis and photophysical properties of tris- and tetrakis-porphyrins that resemble the arrangement of chromophores in the natural system

Tris-porphyrin and tetrakis-porphyrin arrays 1 and 2 are proposed as models for the arrangement of the chromophores that constitute photosynthetic reaction centres (PRC's). Their porphyrinic chromophores are similar in distance apart to the key chromophores of PRC's and the C2 symmetric arrangement of the macrocycles that constitute the 'special pair' where charge separation occurs is also incorporated. The use of zinc(II) and gold(III) chelation establishes an energy gradient for photoinduced electron transfer across each compound. Synthesis was achieved in good yields through a strategy that used the construction of biquinoxalinyl and Tr?ger's base linkages between the porphyrinoid components. Compounds which are bis-porphyrin molecular components of the arrays were also synthesised. Photophysical analyses indicate that long-range photoinduced energy and electron transfer processes occur in the extended arrays in addition to those occurring in the component bis-porphyrins. Evidence for step-wise electron transfer between terminal zinc(II)-chelated and gold(III)-chelated porphyrins has been detected in both porphyrins 1 and 2 in polar solvents, representing charge transfer across 35 A and 50 A, respectively. At 298 K, in deaerated benzonitrile, the lifetime of the charge transfer state of the tris-porphyrin 1 is 150 ns and the lifetime of the charge transfer state of tetrakis-porphyrin 2 is 59.4 micros; very long when compared to simpler chemical model systems, but still much shorter than the 1 s lifetime of the charge separated state of natural PRC's in cell membranes.     

Surface Architectures Built around Perylenediimide Stacks

Simple stacks of perylenediimides (PDIs) grown directly on solid surfaces are an intriguing starting point for the construction of multicomponent architectures because their intrinsic activity is already very high. The ability of PDI stacks to efficiently generate photocurrent originates from the strong absorption of visible light and the efficient transport of both electrons and holes after generation with light. The objective of this study was to explore whether or not the excellent performance of these remarkably simple single‐channel photosystems could be further improved in more sophisticated multicomponent architectures. We report that the directional construction of strings of anions or cations along the PDI stacks does not significantly improve their activity; that is, the intrinsic activity of PDI stacks is too high to yield ion‐gated photosystems. The directional construction of electron‐ and hole‐transporting stacks of naphthalenediimides (NDIs) and oligothiophenes along the central PDI stack did not improve photocurrent generation under standard conditions either. However, the activity of double‐channel photosystems increased with increasing thickness, whereas increasing charge recombination with single‐channel PDI stacks resulted in decreasing activity with increasing length. Most efficient long‐distance charge transport was found with double‐channel photosystems composed of PDIs and NDIs. This finding suggests that over long distances, PDI stacks transport holes better than electrons, at least under the present conditions. Triple‐channel photosystems built around PDI stacks with oligothiophenes and triphenylamines were less active, presumably because hole mobility in the added channels was inferior to that in the original PDI stacks, thus promoting charge recombination.     

Charge separation in DNA via consecutive adenine hopping

Charge transfer in DNA is of current interest because of the involvement of charge transfer in oxidative DNA damage and electronic molecular devices. We have investigated the charge separation process via the consecutive adenine (A)-hopping mechanism using laser flash photolysis of DNA conjugated with naphthaldiimide (NDI) as an electron acceptor and phenothiazine (PTZ) as a donor. Upon the 355-nm laser flash excitation of NDI, the charge separation and recombination process between NDI and PTZ was observed. The yields of the charge separation via the consecutive A-hopping were slightly dependent upon the number of A bases between the two chromophores, while the charge recombination rate was strongly dependent upon the distance. The charge-separated state persisted over 300 micros when NDI was separated from PTZ by eight A bases. Furthermore, the rate constant of the A-hopping process was determined to be 2 x 10(10) s(-1) from an analysis of the yield of the charge separation depending on the number of A-hopping steps.     

DNA‐Based Oligochromophores as Light‐Harvesting Systems

The chromophores ethynyl pyrene as blue, ethynyl perylene as green and ethynyl Nile red as red emitter were conjugated to the 5‐position of 2′‐deoxyuridine via an acetylene bridge. Using phosphoramidite chemistry on solid phase labelled DNA duplexes were prepared that bear single chromophore modifications, and binary and ternary combinations of these chromophore modifications. The steady‐state and time‐resolved fluorescence spectra of all three chromophores were studied in these modified DNA duplexes. An energy‐transfer cascade occurs from ethynyl pyrene over ethynyl perylene to ethynyl Nile red and subsequently an electron‐transfer cascade in the opposite direction (from ethynyl Nile red to ethynyl perylene or ethynyl pyrene, but not from ethynyl perylene to ethynyl pyrene). The electron‐transfer processes finally provide charge separation. The efficiencies by these energy and electron‐transfer processes can be tuned by the distances between the chromophores and the sequences. Most importantly, excitation at any wavelength between 350 and 700 nm finally leads to charge separated states which make these DNA samples promising candidates for light‐harvesting systems.     

Excited-state symmetry breaking in cofacial and linear dimers of a green perylenediimide chlorophyll analogue leading to ultrafast charge separation

Photoexcitation of chromophoric dimers constrained to a symmetric pi-stacked geometry by their molecular structure usually produces excimers independent of solvent polarity, while dimers with edge-to-edge perpendicular pi systems undergo excited-state symmetry breaking in highly polar solvents leading to intradimer charge separation. We present direct evidence for symmetry breaking in the lowest excited singlet state of a symmetric cofacial dimer of 1,7-bis(pyrrolidin-1'-yl)-perylene-3,4:9,10-bis(dicarboximide) (5PDI) in the low polarity solvent toluene to produce a radical ion pair quantitatively. This dimer, cof-5PDI2, was synthesized by attaching two 5PDI chromophores via imide groups to a xanthene spacer. For comparison, a linear symmetric dimer, lin-5PDI2, was prepared in which the 5PDI chromophores are linked end-to-end via a N-N single bond between their imides. The edge-to-edge pi systems of the 5PDI chromophores within lin-5PDI2 are perpendicular to one another. Ground-state absorption spectra of both 5PDI dimers show exciton coupling, which is consistent with the orientation of the 5PDI chromophores relative to one another. Ultrafast transient absorption spectroscopy following excitation of the dimers with 700 nm, 100 fs laser pulses shows that quantitative intradimer electron transfer occurs in cof-5PDI2 in toluene with tau = 0.17 ps followed by charge recombination to the ground state with tau = 222 ps. Similar measurements on lin-5PDI2 reveal that photoinduced electron transfer does not occur in toluene, but occurs in more polar solvents such as 2-methyltetrahydrofuran, wherein tau = 55 ps for charge separation and tau = 99 ps for charge recombination. Excited-state symmetry breaking in 5PDI dimers provides new routes to biomimetic charge separation and storage assemblies that can be more easily prepared and modified than those based on multiple tetrapyrrole macrocycles.     

An Efficient Strategy for Boosting Photogenerated Charge Separation by Using Porphyrins as Interfacial Charge Mediators

Surface recombination at the photoanode/electrolyte junction seriously impedes photoelectrochemical (PEC) performance. Through coating of photoanodes with oxygen evolution catalysts, the photocurrent can be enhanced; however, current systems for water splitting still suffer from high recombination. We describe herein a novel charge transfer system designed with BiVO₄ as a prototype. In this system, porphyrins act as an interfacial‐charge‐transfer mediator, like a volleyball setter, to efficiently suppress surface recombination through higher hole‐transfer kinetics rather than as a traditional photosensitizer. Furthermore, we found that the introduction of a “setter” can ensure a long lifetime of charge carriers at the photoanode/electrolyte interface. This simple interface charge‐modulation system exhibits increased photocurrent density from 0.68 to 4.75 mA cm^?2 and provides a promising design strategy for efficient photogenerated charge separation to improve PEC performance.     

Enhanced Photocurrent Generation of Graphene/Au@ZnO Honeycomb Film

A bio‐inspired graphene/Au@ZnO photoelectrode has been prepared via breath figure method, in which Au@ZnO nanospheres were uniformly distributed in the whole honeycomb film. The size of the honeycomb holes effects the light using efficiency. The honeycomb film with smaller holes in more ordered array shows better antireflective property. All the formed graphene/Au@ZnO honeycomb photoelectrodes show a fast, stable, and reversible response of photocurrent accompanied by each switch‐on and switch‐off event. Au@ZnO ‐modified graphene honeycomb film can combine the advantages of increased light harvesting provided by honeycomb structure, efficient charge separation from Au nanoparticles (NPs ), and efficient electron transfer provided by graphene. Au@ZnO ‐ modified graphene honeycomb film shows a two‐fold increase of photocurrent generation than ZnO ‐modified graphene honeycomb film and a three‐fold increase of photocurrent generation than Au@ZnO ‐modified graphene smooth film, respectively. The rational design and engineering of multi components with different functions in a hybrid bio‐inspired structure hold great promise for further efficient solar energy conversion devices.     

Conformation‐Controlled Diplatinum(II)–Ferrocene Dyads to Achieve Long‐Lived Charge‐Separated States

Square‐planar polypyridyl platinum(II) complexes possess a rich range of structural and spectroscopic properties that are ideal for designing artificial photosynthetic centers. Taking advantage of the directionality in the charge‐transfer excitation from the metal to the polypyridyl ligand, we describe here diplatinum(II)–ferrocene dyads, open‐butterfly‐like dyad 1 and closed‐butterfly‐like dyad 2 , which were designed to understand the conformation and orientation effects to prolong the lifetime of charge‐separated state. In contrast to the open‐butterfly‐like dyad 1 , the closed‐butterfly‐like dyad 2 shows three‐times long lifetime of charge separated state upon photoexcitation, demonstrating that the orientation in the rigid structure of dyad 2 is a very important issue to achieve long‐lived charge separated state.     

Donor–Acceptor Heterojunction Configurations Based on DNA–Multichromophore Arrays

Multichromophore arrays of bis(2‐thienyl)diketopyrrolopyrrole (DPP) and naphthalenediimide (NDI) with two Zn^II‐cyclens were constructed using thymidine DNA as a scaffold through the binding of the Zn^II‐cyclens with thymine bases. We demonstrate photocurrent generation in a donor–acceptor heterojunction configuration consisting of the DPP (donor) and NDI (acceptor) arrays co‐immobilized on an Au electrode. The co‐immobilized electrode exhibited good photocurrent responses because of the efficient charge separation between the DPP and NDI arrays. In contrast, an immobilized electrode consisting of randomly assembled DPP‐NDI arrays generated no photocurrent response because DPP formed ground‐state charge‐transfer complexes with NDI in the randomly assembled arrays. Therefore, our approach to generate donor–acceptor heterojunctions based on DNA–multichromophore arrays is a useful method to efficiently generate photocurrent.     

DNA-mediated exciton coupling and electron transfer between donor and acceptor stilbenes separated by a variable number of base pairs

The synthesis, steady-state spectroscopy, and transient absorption spectroscopy of DNA conjugates possessing both stilbene electron donor and electron acceptor chromophores are described. These conjugates are proposed to form nicked DNA dumbbell structures in which a stilbenedicarboxamide acceptor and stilbenediether donor are separated by variable numbers of A-T or G-C base pairs. The nick is located either adjacent to one of the chromophores or between two of the bases. Thermal dissociation profiles indicate that stable structures are formed possessing as few as two A-T base pairs. Circular dichroism (CD) spectra in the base pair region are characteristic of B-DNA duplex structures, whereas CD spectra at longer wavelengths display two bands attributed to exciton coupling between the two stilbenes. The sign and intensity of these bands are dependent upon both the distance between the chromophores and the dihedral angle between their transition dipoles [Deltaepsilon approximately Rda(-2) sin(2theta)]. Pulsed laser excitation of the stilbenediamide results in creation of the acceptor-donor radical ion pair, which decays via charge recombination. The dynamics of charge separation and charge recombination display an exponential distance dependence, similar to that observed previously for systems in which guanine serves as the electron donor. Unlike exciton coupling between the stilbenes, there is no apparent dependence of the charge-transfer rates upon the dihedral angle between donor and acceptor stilbenes. The introduction of a single G-C base pair between the donor and acceptor results in a change in the mechanism for charge separation from single step superexchange to hole hopping.     

Visible‐Light Photoresponse of Gold Nanoparticles Supported on TiO2: A Combined Photocatalytic,Photoelectrochemical, and Transient Spectroscopy Study

In the context of gaining understanding on the origin of the visible‐light photoresponse of TiO₂ containing gold nanoparticles, the photocurrent spectra and photocatalytic H₂ evolution of titania (P25) and Au–P25 were compared. Whereas no photocurrent was detected upon visible‐light irradiation for either of the two photocatalysts, Au–P25 exhibited photocatalytic H₂ evolution for wavelengths between 400 and 575 nm. This contradictory behavior under visible‐light irradiation of Au–P25 was rationalized by transient absorption spectroscopy. It was suggested that photocatalytic H₂ generation results from methanol quenching of the charge‐separation state in each semiconductor nanoparticle, but the lack of photocurrent is due to the short lifetime of the charge separation, which makes interparticle charge migration for micrometric distances unlikely.     

Crossover from superexchange to hopping as the mechanism for photoinduced charge transfer in DNA hairpin conjugates

The mechanism and dynamics of photoinduced charge separation and charge recombination have been investigated in synthetic DNA hairpins possessing donor and acceptor stilbenes separated by one to seven A:T base pairs. The application of femtosecond broadband pump-probe spectroscopy, nanosecond transient absorption spectroscopy, and picosecond fluorescence decay measurements permits detailed analysis of the formation and decay of the stilbene acceptor singlet state and of the charge-separated intermediates. When the donor and acceptor are separated by a single A:T base pair, charge separation occurs via a single-step superexchange mechanism. However, when the donor and acceptor are separated by two or more A:T base pairs, charge separation occurs via a multistep process consisting of hole injection, hole transport, and hole trapping. In such cases, hole arrival at the electron donor is slower than hole injection into the bridging A-tract. Rate constants for charge separation (hole arrival) and charge recombination are dependent upon the donor-acceptor distance; however, the rate constant for hole injection is independent of the donor-acceptor distance. The observation of crossover from a superexchange to a hopping mechanism provides a "missing link" in the analysis of DNA electron transfer and requires reevaluation of the existing literature for photoinduced electron transfer in DNA.     

The HOMO Nodal Arrangement in Polychromophoric Molecules and Assemblies Controls the Interchromophoric Electronic Coupling

Triptycenes spontaneously assemble into two‐dimensional networks in which long‐range charge transport is facilitated by the extensive electronic coupling through the triptycene framework (intramolecularly) and by cofacial π‐stacking (intermolecularly). While designing and synthesizing next‐generation triptycenes containing polyaromatic chromophores, the electronic coupling amongst the chromophores was observed to be highly dependent on the nature and position of the substituents. Herein, we demonstrate using hexaalkoxytriptycenes that the electronic coupling amongst the chromophores is switched on and off by a simple repositioning of the substituents, which alters the nodal arrangement of the HOMOs of the individual chromophores. A visual inspection of the HOMOs can thus provide a ready evaluation of the electronic coupling in polychromophoric molecules/assemblies, and will serve as an important tool for the rational design of modern charge‐transport materials.     

Fluorescence Quenching over Short Range in a Donor‐DNA‐Acceptor System

A new donor‐DNA‐acceptor system has been synthesized containing Nile red‐modified 2′‐deoxyuridine as charge donor and 6‐N,N‐dimethylaminopyrene‐modified 2′‐deoxyuridine as acceptor to investigate the charge transfer in DNA duplexes using fluorescence spectroscopy and time‐resolved femtosecond pump‐probe techniques. Fluorescence quenching experiments revealed that the quenching efficiency of Nile red depends on two components: 1) the presence of a charge acceptor and 2) the number of intervening CG and AT base pairs between donor and acceptor. Surprisingly, the quenching efficiency of two base pairs (73 % for CG and the same for AT) is higher than that for one base pair (68 % for CG and 37 % for AT), while at a separation of three base pairs less than 10 % quenching is observed. A comparison with the results of time‐resolved measurements revealed a correlation between quenching efficiency and the first ultrafast time constant suggesting that quenching proceeds via a charge transfer from the donor to the acceptor. All transients are satisfactorily described with two decays: a rapid charge transfer with 600 fs (～10¹² s^?1) that depends strongly and in a non‐linear fashion on the distance between donor and acceptor, and a slower time constant of a few picoseconds (～10¹¹ s^?1) with weak distance dependence. A third time constant on a nanosecond time scale represents the fluorescence lifetime of the donor molecule. According to these results and time‐dependent density functional theory (TDDFT) calculations a combination of single‐step superexchange and multistep hopping mechanisms can be proposed for this short‐range charge transfer. Furthermore, significantly less quenching efficiency and slower charge transfer rates at very short distances indicate that the direct interaction between donor and acceptor leads to a local structural distortion of DNA duplexes which may provide some uncertainty in identifying the charge transfer rates in short‐range systems.     

Charge separation in acridine- and phenothiazine-modified DNA

The formation of the long-lived, charge-separated state in DNA upon visible light irradiation is of particular interest in molecular-scale optoelectronics, sensor design, and other areas of nanotechnology. However, the efficient generation of the charge-separated state is hampered by fast charge recombination within a contact ion pair, which limits the application of DNA for photoelectrochemical sensors and devices. In this study, a series of protonated 9-alkylamino-6-chloro-2-methoxyacridine (Acr+)- and phenothiazine (Ptz)-modified DNAs were synthesized for the further understanding of the mechanism of charge separation in DNA to generate a long-lived, charge-separated state with a high quantum yield (Phi). The Acr+ serves as a photosensitizer to produce a hole on guanine (G), and the G-C base pairs were used as a hole-transporting pathway to separate a hole from Acr* (the one-electron-reduced form of Acr+) to be trapped at Ptz. Since Acr+ oxides only G upon photoexcitation, the A-T base pair can be used as a spacer between Acr+ and the G-C base pair to avoid the formation of a contact ion pair. The charge injection dynamics was investigated by steady-state fluorescence spectra and fluorescence lifetime measurements, and the Phi and the lifetime of the charge-separated state produced upon photoirradiation were assessed by nanosecond laser flash photolysis of the Acr+- and Ptz-modified DNA. A long-lived, charge-separated state was successfully formed upon visible-light irradiation, and the Phi was the highest for the DNA having a single intervening A-T base pair between Acr+ and the G-C base pair. These results clearly demonstrated that the charge separation process in DNA can be refined by putting a redox-inactive intervening base pair as a spacer between a photosensitizer and the nucleobase to be oxidized to slow down the charge recombination rate.     

Identification of a totally charge separated state in completely rigid trichromophoric compounds

Two ‘triads’ 1-syn and 1-anti were investigated containing the same linear arrangement of two electron donors and an acceptor connected by fully rigid saturated hydrocarbon bridges. The systems differ in the relative orientation of the bridges and thereby in the distance between the terminal chromophores which is ≈ 14.9 and ≈ 19.4 Å in the syn and anti isomer respectively. For both systems full charge separation between the terminal chromophores is shown to occur upon photoexcitation of the central donor chromophore, but the lifetime of this charge separation is dramatically longer in 1-anti.     

Vectorial Electron Transfer in Donor–Photosensitizer–Acceptor Triads Based on Novel Bis‐tridentate Ruthenium Polypyridyl Complexes

The first examples of rodlike donor–photosensitizer–acceptor arrays based on bis‐2,6‐di(quinolin‐8‐yl)pyridine Ru^II complexes 1 a and 3 a for photoinduced electron transfer have been synthesized and investigated. The complexes are synthesized in a convergent manner and are isolated as linear, single isomers. Time‐resolved absorption spectroscopy reveals long‐lived, photoinduced charge‐separated states (τ_CSS ( 1 a )=140 ns, τ_CSS ( 3 a )=200 ns) formed by stepwise electron transfer. The overall yields of charge separation (≥50 % for complex 1 a and ≥95 % for complex 3 a ) are unprecedented for bis‐tridentate Ru^II polypyridyl complexes. This is attributed to the long‐lived excited state of the [Ru(dqp)₂]²⁺ complex combined with fast electron transfer from the donor moiety following the initial charge separation. The rodlike arrangement of donor and acceptor gives controlled, vectorial electron transfer, free from the complications of stereoisomeric diversity. Thus, such arrays provide an excellent system for the study of photoinduced electron transfer and, ultimately, the harvesting of solar energy.     

Photosensitization of Nanocrystalline TiO2 Electrode Modified with C60 Carboxylic Acid Derivatives

C₆₀ carboxylic acid derivatives can be readily adsorbed on the surface of nanocrystalline TiO₂ film. The C₆₀ carboxylic acids adsorbed on nanocrystalline TiO₂ films act as charge‐transfer sensitizer. The electron transport from TiO₂ to the C₆₀ derivatives results in the generation of the cathodic photocurrent. The short‐circuit photocurrent of a C₆₀ tetracarboxylic acid is 0.45 μA/cm² under 464 nm light illumination. The photoelectric behaviour of ITO electrodes modified by the same C₆₀ carboxylic acids is different from that of the modified TiO₂ electrodes, and shows anodic photocurrent.     

Electronic Interactions of Michler's Ketone with DNA Bases in Synthetic Hairpins

The mechanism and dynamics of photoinduced electron transfer in two families of DNA hairpins possessing Michler's ketone linkers have been investigated by means of steady state and time‐resolved transient absorption and emission spectroscopies. The excited state behavior of the diol linker employed in hairpin synthesis is similar to that of Michler's ketone in methanol solution. Hairpins possessing only a Michler's ketone linker undergo fast singlet state charge separation and charge recombination with an adjacent purine base, attributed to well‐stacked ground state conformations, and intersystem crossing to the triplet state, attributed to poorly stacked ground state conformations. The failure of the triplet to undergo electron transfer reactions on the 7 ns time scale of our measurements is attributed to the low triplet energy and reduction potential of the twisted triplet state. Hairpins possessing both a Michler's ketone linker and a perylenediimide base surrogate separated by four base pairs undergo photoinduced hole transport from the diimide to Michler's ketone upon excitation of the diimide. The efficiency of hole transport is dependent upon the sequence of the intervening purine bases.