A DFT study on the hydrolysis mechanism of NH‐tautomeric antitumors of [HL][trans‐RuCl4L(dmso‐S)]

The hydrolysis process of Ru (III) complex [Htrz][trans‐RuCl₄(1‐H‐1,2,4‐triazole)(dmso‐S)] 1 , a potential antitumor complex similar to the well‐known anticancer agent [ImH][trans‐RuCl₄(Im)(dmso‐S)] (NAMI‐A), has been investigated by using density functional theory (DFT) method, and the solvent effect was also considered and calculated by conductor‐like polarizable calculation model (CPCM). Meanwhile, the hydrolysis process of the NH‐tautomeric isomer, [Htrz][trans‐RuCl₄(4‐H‐1,2,4‐triazole)(dmso‐S)] 2 , was also modeled and predicted by the same methods. The structural characteristics and the detailed energy profiles for the hydrolysis processes of two isomers have been obtained. The analysis of thermodynamic and kinetic characteristics of hydrolysis reaction suggests the following: for the first hydrolysis step, the Complex 1 has lower hydrolysis rate than the reported anticancer drug NAMI‐A, and the result is in accordance with experimental one. However, Complex 1 has obviously higher hydrolysis rate than its isomer Complex 2 , and the result was reasonably explained in theory. For the second hydrolysis step, the formation of cis‐diaqua species is thermodynamic preferred to that of trans isomers. In addition, the trend in nucleophilic attack abilities (A) of hydrolysis products by pertinent biomolecules was revealed and predicted. © 2009 Wiley Periodicals, Inc. Int J Quantum Chem, 2010     

Aquotisierung descis-di-isothiocyanato-bis-äthylendiaminchrom(III)-Ions in sauren Lösungen Kinetik und Mechanismus der Substitutionsreaktionen von Komplexverbindungen, 53. Mitt.

The aquation rate ofcis-[Cr(en)₂(NCS)₂]NO₃ has been studied at different temperatures and HClO₄ concentrations. The protolytic pre-equilibrium (1) as well as the parallel aquation reactions (2) and (3) have been assumed. Activation enthalpy and entropy values have been derived from experimental data for both aquation reactions. By presupposing a dissociation mechanism, the activation parameters obtained as well as those of the aquation of thetrans isomer, are discussed in terms of the electronic structure. Equilibrium constants of reaction (1) are compared to those of the analogous Co(III) complexes and are discussed.     

Base hydrolysis of mono-alkylsubstituted chloropentaamminecobalt(III) complexes

Summary The preparation of the series ofcis- andtrans-[Co(NH₃)₄(RNH₂)Cl]²⁺ complexes (withcis, R = Me orn-Pr andtrans, R = Me, Et,n-Pr,n-Bu ori-Bu) is described. The u.v-visible spectra indicate a decrease of the ligand field on increasing chain length. Infrared spectra show an enhanced Co-Cl bond strength compared to the pentaammine. Partial molar volumes of the complex cations do not reveal steric compression. From proton exchange studies in D₂O it follows that [Co(NH₃)₅Cl]²⁺ and thecis- andtrans-[Co(NH₃)₄-(CH₃NH₂)C1]²⁺ complexes exchange the amine protons on the grouptrans to the chloro faster than those on thecis. A coordinated methylamine group exchanges its amine protons slower than a corresponding NH₃ group in the parent pentaammine, but the methyl introduction accelerates the exchange of the other NH₃ groups. The aquation of thetrans-alkylamine complexes (studied at 52° C) is acceleratedca. 10 times compared to the parent pentaammine, irrespective of the nature of the alkyl group. Thecis complexes do not show this acceleration of aquation. In base hydrolysis (studied at 25° C) thecis complexes are the most reactive (a factor 20 over the parent ion). Thecis/trans product ratio in base hydrolysis and the competition ratio in the presence of azide ions were calculated from the 500 MHz¹H n.m.r. spectra, which display distinctly different alkyl resonances for each individual complex. Thecis ions react under stereochemical retention of configuration; thetrans compounds give 10±1%trans tocis rearrangement. The ionic strength (4 mol dm^–3) and the pH do not affect this result. The same product ratio is obtained in methanol-water and DMSO-water mixtures. Ammoniation in liquid ammonia gives the same ratios as in base hydrolysis, base-catalyzed solvolysis in neat methylamine gives stereochemical retention for both thecis- andtrans-methylamine ion. The product competition ratio (Co-N₃)/(Co-OH₂) for thecis compounds and the bulkier amines (R =n- andi-Bu), 15–25% at 1 mol dm^–3N ₃ ^– , isca. twice that of thetrans compounds and the pentaammine. The results are interpreted in the classical conjugate base mechanism, and discussed in the context of current ideas about stereochemistry of base hydrolysis.Prof. C. R. Píriz Mac-Coll from Uruguay is a guest at the Free University of Amsterdam.     

CHARACTERIZATION OF CIS- AND TRANS-DINITROBIS-(l-CYCLOHEXANEDIAMINE)-COBALT(III) CHLORIDE1

Abstract

Two geometrical isomers of [Co(l-chxn)₂(No₂)₂]Cl have been isolated. The trans-isomer is eluted first from a cellulose ion exchange column as a single isomer. The cis-isomer corresponds to the complex previously reported as the trans-isomer. The cis-isomer with the same CD sign pattern as for the trans-isomer is stereoselectively favored, but a small amount of the second cis-isomer separates using Cellex CM ion exchange cellulose. The CD spectra of the cis- and trans- isomers are similar to those of the corresponding isomers of the l-pn complex.     

Electron impact mass spectra of some nickel(II) and palladium(II) complexes of diphenylphosphinoacetone and 3-diphenylphosphinobutan-2-one

The electron impact mass spectral fragmentation of five newly synthesized Ni(II) and Pd(II) complexes of diphenylphosphinoacetone (HL), i.e. trans-[ NiCl₂(HL)₂] and trans-[PdCl₂(HL)₂] and their enolates cis-[NiL₂] and cis-[PdL₂] and the bis-enolate of 3-diphenylphosphinobutan-2-one (HLMe), trans-[Ni(LMe)₂], is discussed. The proposed fragmentation mechanisms and the ion structures were confirmed by high-resolution data for three of the compounds and by Ni and Pd isotope abundances. The results obtained reveal that a mass spectral differentiation is useful in the identification of these types of complexes. Especially with phosphinoenolate bis-chelates molecular ion peaks are observed.     

Equilibrium and <Superscript>1</Superscript>H NMR Kinetic Study of the Reactions of Dichlorido [S-Methyl-L-Cysteine(N,S)]Platinum(II) Complex with Some Relevant Biomolecules

The formation equilibria of the [Pt(SMC)(H₂O)₂]⁺ complex with some biologically relevant ligands such as L-methionine (L-met) and glutathione (GSH) were studied. The stoichiometry and stability constants of the formed complexes are reported, and the concentration distribution of the various complex species has been evaluated as a function of pH. The reaction between [PtCl₂(SMC)] and guanosine-5′-monophosphate (5′-GMP) was studied by ¹H NMR spectroscopy. The NMR spectra indicated that first step is the hydrolysis of the [PtCl₂(SMC)] complex and second step is the substitution of an aqua ligand, either in the cis or trans position with guanosine-5′-monophosphate in molar ratio 1:1. The values of rate constant showed faster substitution of coordinated H₂O in the trans position to the S donor atom of S-methyl-L-cysteine, whereas the slower reaction was assigned to the displacement of the cis coordinated aqua molecule. This is due to the strong trans labilization effect of coordinated sulfur. Electronic Supplementary Material  The online version of this article () contains supplementary material, which is available to authorized users.     

Investigations on organoantimony compounds : XVII. Preparation and properties of heterocyclic trans-dichloro-β-diketonato-cis-diorganoantimony(V) compounds. Influence of stereochemistry on β-diketonate ligand exchange reactions in octahedral dichloro-β-diketonatodiorganoantimony(V) compounds

A series of heterocyclic trans-dichloro-β-diketonato-cis-diorganoantimony(V) compounds of the type R₂SbCl₂X (R₂ = (CH₂)₄, (CH₂)₅, o,o′−C₆H₄C₆H₄, o,o′−C₆H₄CH₂C₆H₄; X = Acac, Dpm) has been synthesized. The stereochemistry of these compounds has been deduced from PMR spectroscopic and molecular dipole moment data. Since the cis-dichloro-β-diketonato-trans-diorganoantimony(V) compounds R₂SbCl₂Acac (R = Me, Et, Ph) were known previously, a set of both cis- and trans-diorgano main group organometallic complexes has thus been made available, which allows a comparative study of the influence of stereochemistry on the strength of metal—ligand interactions in this type of octahedral d¹⁰ metal complex. β-Diketonate—ligand exchange reactions have been studied by PMR spectroscopy, and a marked influence of stereochemistry observed. trans-Dichloro-β-diketonato-cis-diorganoantimony(V) compounds undergo ligand exchange only slowly, if at all, whereas cis-dichloro-β-diketonato-trans-diorganoantimony(V) compounds react instantaneously. Both PMR chemical shift data and IR spectroscopic data point to the occurrence of a stronger antimony-β-diketonate interaction in trans-dichloro-β-diketonato-cis-diorganoantimony than in cis-dichloro-β-diketonato-trans-diorganoantimony compounds. This can be understood in terms of the hybridization of the antimony valence orbitals. The results are in line with the assumption that Sb---O bond rupture is the rate-determining step in β-diketonate ligand exchange.     

Monitoring of the synthesis ofcis andtrans ruthenium macrocyclic complexes by reversed-phase high-performance liquid chromatography

Summary The synthesis of the complex [Ru(cyclam)Cl₂]Cl (cyclam=1,4,8,11-tetraazacyclotetradecane) has been monitored by reversed-phase high-performance liquid chromatography. The analytical results obtained during the reaction have shown that it is feasible to identify and isolate the two isomerscis- andtrans- [Ru(cyclam)-Cl₂]Cl. The use of an octadecylsiloxy preparative column enabled the separation and purification of these two isomers and the compounds have been obtained in high purity. The use of reversed-phase high-performance liquid chromatography has afforded complete analytical control of the syntheses of saturated nitrogendonor macrocyclic complexes of ruthenium, enabling identification of thecis andtrans isomers of the complex [Ru(cyclam)Cl₂]Cl.     

Complexes of nickel(II) and palladium(II) with thiobenzamide

Summary The electronic and vibrational spectra of Ni^II and Pd^II complexes with thiobenzamide, L, are discussed. L acts as a sulphur donor ligand. The Pd^II compounds and (NiL₄)(ClO₄)₂ are square planar. PdL₂Cl₂ has acis-structure, while PdL₂X₂ (X=Br or I) istrans; NiL₄Cl₂ istrans-octahedral. The i.r. bands due to(M.S) and(MX) have been assigned. The influence of the anions on the properties of the complexes, both in solution and in the solid state, is discussed.     

Kinetics of aquation and base hydrolysis ofcis-(carboxylato) (ethylamine)bis(ethylenediamine)cobalt(III) ions

Summary The aquation ofcis-[Co(en)₂(NH₂Et)O₂CR]²⁺ [R=H or Me] is strongly acid-catalysed and the rate and activation parameters for this process are reported. No significant rate difference is observed in the spontaneous aquation path for the complexes. The acetato complex undergoes acid catalysed aquation at a rate comparable to the of the corresponding formato complex, in contrast with the relative basicities of the coordinated formate and acetate. This result is interpreted in terms of relative solvation effects of the initial and transition states of both complexes.The base hydrolysis of both complexes obeys overall second order kinetics in the 0.05[OH^–]_T 0.35 mol dm^–3 range (I=0.5 mol dm^–3). The formato complex reacts five times faster than its acetato analogue under comparable conditions, which is fully consistent with the dissociative mode of activation of the amido conjugate base involving Co–O bond heterolysis. A substantially large positive value for the activation entropy supports SN₁CB mechanism for base hydrolysis.     

Kinetics and mechanism of acid and base hydrolysis ofcis-chloro-(benzotriazole)bis(ethylenediamine)cobalt(III) andcis-chloro-(N-methylbenzotriazole)bis(ethylenediamine)cobalt(III) cations

Summary The kinetics of acid hydrolysis ofcis-[CoCl(btzH)(en)₂]²⁺ andcis-[CoCl(btzMe)(en)₂]²⁺ complexes (where btzH = benzotriazole, btzMe =N-methylbenzotriazole and en = ethylenediamine) have been investigated in HClO₄ at ionic strength 1 = 0.25 mol dm^–3 in the 30–40° range. In the 1.0 x 10^–1 to 1.0 X 10^–3 mol dm^–3 acid strength range, the rate of aquation of the [CoCl(btzH)(en)₂]²⁺ cation follows the relationship:-d ln[complex]/dt = k₁ + k₂K_NH[^H+]^–1, where k₁ and k₂ are aquation rate constants of the acid independent and acid dependent steps respectively, and K_NH is the acid dissociation constant of the coordinated benzotriazole.cis-[CoCl(btzMe)-(en)₂]²⁺ undergoes acid independent hydrolysis presumably due to the absence of a labile N-H proton. The base hydrolysis could be followed for thecis-[CoCl(btzMe)(en)₂]²⁺ complex only by measuring hydrolysis rates at 0°.     

Kinetics of substitution reactions of transition metal complexes in 1,3-dioxolan-2-one + water and 4-methyl-1,3-dioxolan-2-one + water solvent mixtures

Summary Rate constants are reported and discussed for several substitutions of inorganic complexes in ethylene carbonate (1,3-dioxolan-2-one) + water and in propylene carbonate (4-methyl-1,3-dioxolan-2-one) + water solvent mixtures. The reactions include aquation ofcis- and oftrans-[Co(en)₂Cl₂]⁺, aquation oftrans-[Cr(OH₂)₄Cl₂]⁺, bromide substitution at [Pd(Et₄dien)Cl]⁺, thiourea substitution atcis-[Pt(4-NCpy)₂Cl₂], and aquation and cyanide attack at [Fe(X-phen)₃]²⁺ cations.     

Palladium(II) Complexes of 1-vinylimidazole

Two new co-ordination compounds of Pd^II with 1-vinylimidazole of the formulae [PdL₄]Cl₂·3H₂O and trans-[PdL₂Cl₂], where L is a 1-vinylimidazole molecule, have been obtained. The compounds were characterised by spectroscopic, molar conductivity, thermogravimetric and magnetochemical measurements. Single crystal X-ray structure analyses of the complexes were also carried out. The compounds are diamagnetic with square-planar coordinatination around the palladium(II) ions. Other physico-chemical properties of the both complexes are compatible with their structures.     

The preparation and characterisation of chromium(III) complexes of C-meso-5, 12-dimethyl-1, 4, 8, 11-tetraazacyclotetradecane (LM). Aquation and base hydrolysis kinetics ofcis- andtrans-[CrLMCl2]+

Summary The reaction of [CrCl₃(DMF)₃] with C-meso-5, 12-dimethyl-1, 4, 8, 11-tetra-azacyclotetradecane(L_M) in DMF gives a mixture ofcis-[CrL_MCl₂]Cl (ca. 90%) andtrans-[CrL_MCl₂]Cl (ca. 10%). These complexes are readily separated, as thecis-isomer is insoluble in warm methanol while thetrans-isomer is soluble. Using the dichlorocomplexes as precursors it has been possible to prepare a range ofcis-[CrL_MX₂]⁺ complexes (X=Br^–, NO ₃ ^– , N ₃ ^– , NCS^– and X₂=bidentate oxalate) and alsotrans-[CrL_MX₂]⁺ complexes (X=Br^–, H₂O or NCS^–). The spectroscopic properties and detailed stereochemistry of the complexes are discussed.The aquation and base hydrolysis kinetics ofcis- andtrans-[CrL_MCl₂]⁺ have been studied at 25° C. Base hydrolysis of thecis-complex is extremely rapid with K_OH =1.46×10⁵ dm³ mol^–1 at 25° C. This unusual reactivity appears to be associated with thetrans II stereochemistry of thesec-NH centres of the macrocycle. Base hydrolysis of thetrans complex with thetrans III chiral nitrogen stereochemistry is quite normal with k_OH =1.1 dm³ mol^–1 s^–1 at 25° C.     

Kinetics of aquation ofcis- andtrans-chloro-nitrobis-(ethylene-diamine)cobalt(III) ion in binary aqueous mixtures

Kinetics of aquation ofcis- andtrans-[Co(en)₂NO₂Cl]⁺ were investigated in aqueous mixtures of MeOH, EtOH,i-PrOH andt-BuOH at 298.1 K. The values of transfer functions corresponding to the transfer of reactant and activated complex from H₂O to the solvent mixtures were calculated from kinetic measurements and from solubilities of the complex salt. The results of the analysis of solvent effect are discussed in terms of D and I_d mechanisms. TMC 2676     

Cis/trans stereochemical effects in the negative chemical ionization/OH− mass spectra of strained-ring azabicycloalkanes using MIKE and CA/MIKE spectrometry

Stereospecific decomposition reactions of isomeric (cis and trans) deprotonated molecules from azabicycloalkane derivatives as azetidinols generated under negative chemical ionization (NCI)/OH^? have been examined using mass-analysed ion kinetic energy (MIKE) and collisional activation (CA)/MIKE spectra. These measurements together with the ones obtained on specifically labelled compounds enabled us to determine the origin of the stereochemical effects. The results indicate that the hydroxylic proton constitutes the preferential (?90%) site for the deprotonation process. Subsequent fragmentations of the deprotonated species observed in the second field-free region of a reversed geometry instrument are affected by the stereochemistry of the hydroxylic group. The isomer with the hydroxyl group in the cis position relative to the hydrogen at the ring junction mainly loses H₂O, while the trans isomer eliminates CH₃˙, both processes occurring with high specificity. Labelling studies indicate that two major pathways exist for the elimination of H₂O from the cis isomer and the loss of CH₃˙ from the trans isomer. The course of the reaction is determined by the ability of the stereoisomers to transfer a proton during the first decomposition step. When the size of the lactam ring is increased from a five-membered ring to a six- or seven-membered ring, these stereochemical effects tend to become less pronounced.     

On the Electrochemical Oxidation of Resveratrol

Resveratrol (3,5,4′‐trihydroxystilbene) is an organic metabolite produced by plants in response to fungal infection. It is found in various plant fruits and is abundant in the skins of unripe grapes and related products. This photosensitive molecule exists in two isomeric forms, trans and cis‐resveratrol. The antioxidant activity of resveratrol, both trans and cis forms, was evaluated by means of cyclic, differential pulse and square‐wave voltammetry over a wide pH range, using a glassy carbon electrode. Voltammograms of resveratrol presented two oxidation peaks; the first oxidation peak corresponds to the oxidation of the phenol group and was shown to undergo an irreversible oxidation reaction. The second oxidation peak corresponds to the oxidation of the resorcinol moiety and is also irreversible. The influence of pH on the electrochemical oxidation process of resveratrol was investigated.     

Initiation of Radical Chain Reactions of Thiol Compounds and Alkenes without any Added Initiator: Thiol‐Catalyzed cis/trans Isomerization of Methyl Oleate

A kinetic study of the dodecanethiol‐catalyzed cis/trans isomerization of methyl oleate (cis‐ 2 ) without added initiator was performed by focusing on the initiation of the radical chain reaction. The reaction orders of the rate of isomerization were 2 and 0.5 for 1 and cis‐ 2 , respectively, and an overall kinetic isotope effect k_H/k_D of 2.8 was found. The initiation was shown to be a complex reaction. The electron‐donor/‐acceptor (EDA) complex of dodecanethiol ( 1 ) and cis‐ 2 formed in a pre‐equilibrium reacts with thiol 1 to give a stearyl and a sulfuranyl radical through molecule‐assisted homolysis (MAH) of the sulfur–hydrogen bond. Fragmentation of the latter gives the thiyl radical, which catalyzes the cis/trans isomerization. A computational study of the EDA complex, MAH reaction, and the sulfuranyl radical calculated that the activation energy of the isomerization was in good agreement with the experimental result of E_A=82 kJ M ^?1. Overall, the results may explain that the thermal generation of thiyl radicals without any initiator is responsible for many well‐known thermally initiated addition reactions of thiol compounds to alkenes and their respective polymerizations and for the low shelf‐life stability of cis‐unsaturated thiol compounds and of mixtures of alkenes and thiol compounds.     

Dediazoniation of Arenediazonium Ions in Homogeneous Solutions. Part XVI. Kinetics and mechanisms of dediazoniation of p-chlorobenzenediazonium tetrafluoroborate in weakly alkaline aqueous solutions under nitrogen gas

The kinetics of reactions of p-chlorobenzenediazonium ions in aqueous buffer solutions (pH 9.0–10.6) under N₂ (< 5 ppb of O₂) have been measured between 20 and 50°C. The formation of trans-diazotate is first-order with respect to the concentration of hydroxyl ions and to the equilibrium concentration of diazonium ions, if the diazonium ion?cis-diazotate equilibrium is considered as a fast prior equilibrium. This indicates that the p-chlorobenzenediazonium ion, in contrast to all previous investigations with the p-nitrobenzenediazonium ion and benzenediazonium ions carrying similar substituents with a ?M effect, rearranges from the cis- to the trans-configuration as diazohydroxide and not as diazotate. The formation of trans-diazotate is catalyzed by carbonate and inhibited by hydrogen carbonate ions; mechanisms of these catalyses are discussed, and the solvent isotope effect K_H2O/K_D2O measured by an ¹H-NMR. technique reported. The kinetics of the dediazoniations can be analyzed as a mixture of two reactions, a relatively fast first reaction, reaction A, which is responsible for about 5% of the total reaction, and a second reaction F. Both are first-order with respect to diazonium ion; reaction A is also first-order in hydroxyl ions. There are some indications that reaction A corresponds to the hydrolysis of the diazonium ion to give eventually amine and nitrite ions. Reaction F shows a complex dependence on hydroxyl ions; it is related to the homolytic dediazoniation.     

Monitoring of the synthesis ofcis andtrans ruthenium macrocyclic complexes by reversed-phase high-performance liquid chromatography

Summary The synthesis of the complex [Ru(cyclam)Cl₂]Cl (cyclam=1,4,8,11-tetraazacyclotetradecane) has been monitored by reversed-phase high-performance liquid chromatography. The analytical results obtained during the reaction have shown that it is feasible to identify and isolate the two isomerscis- andtrans- [Ru(cyclam)Cl₂]Cl. The use of an octadecylsiloxy preparative column enabled the separation and purification of these two isomers and the compounds have been obtained in high purity. The use of reversed-phase high-performance liquid chromatography has afforded complete analytical control of the syntheses of saturated nitrogendonor macrocyclic complexes of ruthenium, enabling identification of thecis andtrans isomers of the complex [Ru(cyclam)Cl₂]Cl.