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1.
Using a full six-dimensional ab initio potential energy surface and nuclear motion Hamiltonian, time-dependent computations were performed for the cis-trans isomerization of HONO. The multiconfiguration time-dependent Hartree method was used to propagate the six-dimensional wave packets. The initial excitations were chosen to be excitations of the local stretch modes and the HON local bend mode. The energy redistribution within 2 to 5 ps in the energy region of the OH stretching modes in both isomers was analyzed. The Fourier transformed frequency domain spectra were attributed to the eigenstates calculated previously by the time-independent variational approach. The results are also compared with classical trajectory computations of Thomson et al. on empirical surfaces. In agreement with matrix experiments, the cis-->trans isomerization was found to be much faster than the opposite interconversion. The intramolecular dynamics were found to be very complex involving numerous weakly excited delocalized eigenstates and anharmonic resonances. Particularly in the cis-isomer, the excitation of the HON bending local mode leads to fast energy redistribution in cis-trans delocalized modes. Neither the excitation of the OH stretching local mode in the cis nor in the trans form produces a fast isomerization, in agreement with the strongly localized characters of the corresponding eigenstates calculated variationally by Richter et al. and the gas phase spectra of HONO.  相似文献   

2.
The positron-electron correlation-polarization potential model is used to calculate annihilation spectra of carbon disulfide and benzene. We assume that the positron is captured in the vibrationally excited states of the target molecule through vibrational Feshbach resonances. Using the standard normal mode representation, we calculated the resonance energies and widths for each vibrational mode. The resonance widths were calculated with Fermi's Golden Rule approximation, where the time-dependent wave packet approach has been applied. We found that vibrational resonances of infrared-active modes play a dominant role in resonant annihilation; however, infrared-inactive modes also contribute to the annihilation spectrum through polarizability changes along normal mode coordinates.  相似文献   

3.
We applied the semiclassical initial value representation method to calculate energies, lifetimes, and wave functions of scattering resonances in a two-dimensional potential for O+O2 collision. Such scattering states represent the metastable O3* species and play a central role in the process of ozone formation. Autocorrelation functions for scattering states were computed and then analyzed using the Prony method, which permits one to extract accurate energies and widths of the resonances. We found that the results of the semiclassical wave packet propagation agree well with fully quantum results. The focus was on the 16O16O18O isotopomer and the anomalous isotope effect associated with formation of this molecule, either through the 16O16O+18O or the 16O+16O18O channels. An interesting correlation between the local vibration mode character of the metastable states and their lifetimes was observed and explained. New insight is obtained into the mechanism by which the long-lived resonances in the delta zero-point energy part of spectrum produce the anomalously large isotope effect.  相似文献   

4.
In a recent paper [B. Poirier, Chem. Phys. 308, 305 (2005)] a full-dimensional quantum method for computing the rovibrational dynamics of triatomic systems was presented, incorporating three key features: (1) exact analytical treatment of Coriolis coupling, (2) three-body "effective potential," and (3) a single bend angle basis for all rotational states. In this paper, these ideas are applied to the Li-(H2) electrostatic complex, to compute all of the rovibrational bound state energies, and a number of resonance energies and widths, to very high accuracy (thousandths of a wave number). This application is very challenging, owing to the long-range nature of the interaction and to narrow level spacings near dissociation. Nevertheless, by combining the present method with a G4 symmetry-adapted phase-space-optimized representation, only modest basis sizes are required for which the matrices are amenable to direct diagonalization. Several new bound levels are reported, as compared with a previous calculation [D. T. Chang, G. Surratt, G. Ristroff, and G. I. Gellene, J. Chem. Phys. 116, 9188 (2002)]. The resonances exhibit a clear-cut separation into shape and Feshbach varieties, with the latter characterized by extremely long lifetimes (microseconds or longer).  相似文献   

5.
Photochemical processes in HNO3, HNO3-H2O, and cis- and trans-HONO following overtone excitation of the OH stretching mode are studied by classical trajectory simulations. Initial conditions for the trajectories are sampled according to the initially prepared vibrational wave function. Semiempirical potential energy surfaces are used in "on-the-fly" simulations. Several tests indicate at least semiquantitative validity of the potential surfaces employed. A number of interesting new processes and intermediate species are found. The main results include the following: (1) In excitation of HNO3 to the fifth and sixth OH-stretch overtone, hopping of the H atom between the oxygen atoms is found to take place in nearly all trajectories, and can persist for many picoseconds. H-atom hopping events have a higher yield and a faster time scale than the photodissociation of HNO3 into OH and NO2. (2) A fraction of the trajectories for HNO3 show isomerization into HOONO, which in a few cases dissociates into HOO and NO. (3) For high overtone excitation of HONO, isomerization into the weakly bound species HOON is seen in all trajectories, in part of the events as an intermediate step on the way to dissociation into OH + NO. This process has not been reported previously. Well-established processes for HONO, including cis-trans isomerization and H hopping are also observed. (4) Only low overtone levels of HNO3-H2O have sufficiently long liftimes to be spectrocopically relevant. Excitation of these OH stretching overtones is found to result in the dissociation of the cluster H hopping, or dissociation of HNO3 does not take place. The results demonstrate the richness of processes induced by overtone excitation of HNO(x) species, with evidence for new phenomena. Possible relevance of the results to atmospheric processes is discussed.  相似文献   

6.
Density functional theory calculations with the B3LYP functional are used to study the structure and stabilities of C5H2 isomers and possible isomerization mechanisms on the triplet and singlet potential energy surfaces.Calculated results show that isomerization of C5H2 is likely to occur on the triplet potential energy surface while direct conversions of the singlet C5H2 isoers via 1,3-hydrogen migration transitions of the singlet C5H2 isomers via 1,3-hydrogen migration transition states are extremely difficult dynamically.In such isomerization processes,the hydrogen transfer processes in carbon chains are the rate-determining steps.The triplet species except the linear ground state X^3∑g^- are rather less stable than their singlet forms,although the singlet and triplet species haver similar geometries.  相似文献   

7.
Two intramolecularly hydrogen-bonded arylhydrazone (aryl = phenyl or naphthyl) molecular switches have been synthesized, and their full and reversible switching between the E and Z configurations have been demonstrated. These chemically controlled configurational rotary switches exist primarily as the E isomer at equilibrium and can be switched to the protonated Z configuration (Z-H(+)) by the addition of trifluoroacetic acid. The protonation of the pyridine moiety in the switch induces a rotation around the hydrazone C=N double bond, leading to isomerization. Treating Z-H(+) with base (K(2)CO(3)) yields a mixture of E and "metastable" Z isomers. The latter thermally equilibrates to reinstate the initial isomer ratio. The rate of the Z → E isomerization process showed small changes as a function of solvent polarity, indicating that the isomerization might be going through the inversion mechanism (nonpolar transition state). However, the plot of the logarithm of the rate constant k vs the Dimroth parameter (E(T)) gave a linear fit, demonstrating the involvement of a polar transition state (rotation mechanism). These two seemingly contradicting kinetic data were not enough to determine whether the isomerization mechanism goes through the rotation or inversion pathways. The highly negative entropy values obtained for both the forward (E → Z-H(+)) and backward (Z → E) processes strongly suggest that the isomerization involves a polarized transition state that is highly organized (possibly involving a high degree of solvent organization), and hence it proceeds via a rotation mechanism as opposed to inversion. Computations of the Z ? E isomerization using density functional theory (DFT) at the M06/cc-pVTZ level and natural bond orbital (NBO) wave function analyses have shown that the favorable isomerization mechanism in these hydrogen-bonded systems is hydrazone-azo tautomerization followed by rotation around a C-N single bond, as opposed to the more common rotation mechanism around the C=N double bond.  相似文献   

8.
In this paper, we report the gas phase infrared spectra of fluorene and its methylated derivatives using a heated multipass cell and argon as a carrier gas. The observed spectra in the 4000–400 cm−1 range have been fitted using the modified scaled quantum mechanical force field (SQMFF) calculation with the 6-311G** basis. The advantage of using the modified SQMFF method is that it scales the force constants to find the best fit to the observed spectral lines by minimizing the fitting error. In this way we are able to assign all the observed fundamental bands in the spectra. With consecutive methyl substitutions two sets of bands are found to shift in a systematic way. The set of four aromatic CH stretching vibrations around 3000 cm−1 shifts toward lower frequencies while the single most intense aromatic CH out-of-plane bending mode around 750 cm−1 shifts toward higher frequencies. The reason for shifting of aromatic CH stretching frequency toward lower wave numbers with gradual methyl substitution has been attributed to the lengthening of the CH bonds due to the +I effect of the methyl groups to the ring current as revealed from the calculations. While the unexpected shifting of the aromatic CH out-of-plane bend toward higher wave numbers with increasing methyl substitution is ascribed to the lowering of the number of adjacent aromatic CH bonds on the plane of the benzene ring with gradual methyl substitutions.  相似文献   

9.
We present complete active space self-consistent field (CASSCF) ab initio molecular dynamics (AIMD) simulations of the preparation of the metastable species vinylidene, and its subsequent, highly exothermic isomerization to acetylene, via electron removal from vinylidene anion (D(2)C=C(-) --> D(2)C=C: --> DC triple bond CD). After equilibrating vinylidene anion-d(2) at either 600 +/- 300 K (slightly below the isomerization barrier) or 1440 K +/- 720 K (just above the isomerization barrier), we remove an electron to form a vibrationally excited singlet vinylidene-d(2) and follow its dynamical evolution for 1.0 ps. Remarkably, we find that none of the vinylidenes equilibrated at 600 K and only 20% of the vinylidenes equilibrated at 1440 K isomerized, suggesting average lifetimes >1 ps for vibrationally excited vinylidene-d(2). Since the anion and neutral vinylidene are structurally similar, and yet extremely different geometrically from the isomerization transition state (TS), neutral vinylidene is not formed near the TS so that it must live until it has sufficient instantaneous kinetic energy in the correct vibrational mode(s). The origin of the delay is explained via both orbital rearrangement and intramolecular vibrational energy redistribution (IVR) effects. Unique signatures of the isomerization dynamics are revealed in the anharmonic vibrational frequencies extracted from the AIMD, which should be observable by ultrafast vibrational spectroscopy and in fact are consistent with currently available experimental spectra. Most interestingly, of those trajectories that did isomerize, every one of them violated conventional transition-state theory by recrossing back to vinylidene multiple times, against conventional notions that expect highly exothermic reactions to be irreversible. The dynamical motion responsible for the multiple barrier recrossings involves strong mode-coupling between the vinylidene CD(2) rock and a local acetylene DCC bend mode that has been recently observed experimentally. The multiple barrier recrossings can be used, via a generalized definition of lifetime, to reconcile extremely disparate experimental estimates of vinylidene's lifetime (differing by at least 6 orders of magnitude). Last, a caveat: These results are constrained by the approximations inherent in the simulation (classical nuclear motion, neglect of rotation-vibration coupling, and restriction to C(s) symmetry); refinement of these predictions may be necessary when more exact simulations someday become feasible.  相似文献   

10.
This review article considers the origin of vibrational anharmonicity in molecules, and the effects that vibrational resonances have on the anharmonicity constants which may be extracted from spectroscopic observations. The importance of the effects of Darling—Dennison resonances, which increase with increasing excitation, as well as Fermi resonances, are considered. The local mode approach to X—Y stretching vibrations is dealt with, as a means of simultaneously accounting for Darling—Dennison resonances and of inter-relating normal mode stretching anharmonicity constants, thus reducing the number of parameters to be determined. The inclusion of Fermi resonances, as necessary, into the calculation is next considered, and the joint local mode-normal mode analysis explained.Applications to ethylenic and methyl group molecules are made. The success of the analyses is demonstrated through complete sets of physically representative anharmonicity constants which reproduce vibrational observations into the visible (16 500 cm−1), and which are mutually self-consistent over molecules containing the same functional groups.Extensions of the simple local mode model are considered, as means of achieving anharmonicity parameters which should describe more closely the molecular potential energy surface, and hence the concomitant physical and chemical processes which it controls.  相似文献   

11.
通过反-1-(4-联苯基)-2-(4-吡啶基)乙烯(EI)在稀硫酸中的光二聚反应合成了r-1,c-2,t-3,t-4-1,3-双(4-联苯基)-2,4-二(4-吡啶基)环丁烷(II).用X射线衍射法测定了其结构.晶体II为单斜晶系,空间群为P2  相似文献   

12.
The vibrational resonance states of the complexes formed in the nucleophilic bimolecular substitution (S(N)2) reaction Cl(-)+CH(3)Br-->ClCH(3)+Br(-) were calculated by means of the filter diagonalization method employing a coupled-cluster potential-energy surface and a Hamiltonian that incorporates an optical potential and is formulated in Radau coordinates for the carbon-halogen stretching modes. The four-dimensional model also includes the totally symmetric vibrations of the methyl group (C-H stretch and umbrella bend). The vast majority of bound states and many resonance states up to the first overtone of the symmetric stretching vibration in the exit channel complex have been calculated, analyzed, and assigned four quantum numbers. The resonances are classified into entrance channel, exit channel, and delocalized states. The resonance widths fluctuate over six orders of magnitude. In addition to a majority of Feshbach-type resonances there are also exceedingly long-lived shape resonances, which are associated with the entrance channel and can only decay by tunneling. The state-selective decay of the resonances was studied in detail. The linewidths of the resonances, and thus the coupling to the energetic continuum, increase with excitation in any mode. Due to the strong mixing of the many progressions in the intermolecular stretching modes of the intermediate complexes, this increase as a function of the corresponding quantum numbers is not monotonic, but exhibits pronounced fluctuations.  相似文献   

13.
DNA-nanotube artificial ion channels   总被引:4,自引:0,他引:4  
There is considerable interest in developing chemical devices that mimic the function of biological ion channels. We recently described such a device, which consisted of a single conically shaped gold nanotube embedded within a polymeric membrane. This device mimicked one of the key functions of voltage-gated ion channels: the ability to strongly rectify the ionic current flowing through it. The data obtained were interpreted using a simple electrostatic model. While the details are still being debated, it is clear that ion-current-rectification in biological ion channels is more complicated and involves physical movement of an ionically charged portion of the channel in response to a change in the transmembrane potential. We report here artificial ion channels that rectify the ion current flowing through them via this "electromechanical" mechanism. These artificial channels are also based on conical gold nanotubes, but with the critical electromechanical response provided by single-stranded DNA molecules attached to the nanotube walls.  相似文献   

14.
The NTB phase phases possess a local helical structure with a pitch length of a few nanometers and is typically exhibited by materials consisting of two rigid mesogenic units linked by a flexible oligomethylene spacer of odd parity, giving a bent shape. We report the synthesis and characterisation of two novel dimeric liquid crystals, and perform a computational study on 10 cyanobiphenyl dimers with varying linking groups, generating a large library of conformers for each compound; this allows us to present molecular bend angles as probability weighted averages of many conformers, rather than use a single conformer. We validate conformer libraries by comparison of interproton distances with those obtained from solution-based 1D 1H NOESY NMR, finding good agreement between experiment and computational work. Conversely, we find that using any single conformer fails to reproduce experimental interproton distances. We find the use of a single conformer significantly overestimates the molecular bend angle while also ignoring flexibility; in addition, we show that the average bend angle and flexibility are both linked to the relative stability of the NTB phase.  相似文献   

15.
Tetranuclear complexes [Zn(4)(bdmap)(2)(OOCR)(6)] 1 (R = Me) and 2 (R = Et), where Hbdmap = 1,3-bis(dimethylamino)-2-propanol, were prepared from zinc carboxylates and Hbdmap in tetrahydrofuran (THF). The solid-state structures of isomers 1a and 2a consist of two pairs of zinc atoms, each bridged by two mu-1,2 and one mu-1,1 carboxylate ligands. Two pairs are connected by two tridentate bdmap ligands with oxygen acting as a bridging donating atom. The complexes retain the tetranuclear structure in solution and two dynamic processes are observed from variable-temperature (1)H and (13)C NMR spectra. A low-temperature process (LT dynamics) observed already below 200 K is a coalescence of the mu-1,2 and the mu-1,1 resonances to a single resonance. An additional dynamic process (HT dynamics) is observed above 247 K (1) and 263 K (2), leading to a coalescence of two dimethylamino resonances. Both dynamic processes are rationalized by a mechanism involving changes in the carboxylate coordination mode termed as carboxylate shift. The LT dynamics is ascribed to interconversions of a single mu-1,2 and a single mu-1,1 carboxylate ligation by rotations of 60 degrees. The interconversions involve all carboxylate ligands in 1 and 2. The HT dynamics is ascribed to the exchange of the coordinating geometries of two carboxylate-bridged zinc atoms. We propose a mechanism that starts with a cleavage of the Zn-N coordination bond. The resulting coordinatively unsaturated zinc atom acquires an additional oxygen donor atom by carboxylate shift of mu-1,2 carboxylate to mu-1,1 mode. The activation parameters (DeltaH values in kilocalories per mole, DeltaS values in calories per mole per kelvin) were determined by line-shape analysis of VT NMR spectra: for 1 in THF-d(8), DeltaH(LT) = 8.1(3), DeltaS(LT) = -12(2), DeltaH(HT) = 17.9(2), DeltaS(HT) = 14(1); for 1 in CDCl(3), DeltaH(HT) = 13.6(5), DeltaS(HT) = 3(3); for 1 in CD(2)Cl(2), DeltaH(HT) = 9.9(3), DeltaS(HT) = -8(2); for 2 in THF-d(8), DeltaH(LT) = 11(1), DeltaS(LT) = -5(3), DeltaH(HT) = 19.6(5), DeltaS(HT) = 18(3). Polymeric [Zn(4)(bdmap)(2)(OOCMe)(6)](n) 1-catena crystallizes from a dichloromethane solution of 1. In 1-catena, the zinc atoms are linked into a chain through mu-1,2 and mu-1,1 acetate alternated by mu-1,2 acetate and bdmap.  相似文献   

16.
In this article, we extend a previous work toward presenting a theoretical study of the effects of Fermi resonances and the fundamental anharmonic coupling parameter α between the high‐frequency mode and the H‐bond bridge. The model incorporates (i) both intrinsic anharmonicities of the fast mode (double well potential) and the H‐bond Bridge (Morse potential), (ii) strong anharmonic coupling theory, (iii) Fermi resonances by the aid of an anharmonic coupling between the fast mode and one or several harmonic bending modes, (iv) quadratic modulation of both the angular frequency and the equilibrium position of the X? …Y stretching mode on the intermonomer ? H… motions, and (v) the quantum direct (fast and bending modes) and indirect dampings (slow mode). The IR spectral density is obtained by Fourier transform of the autocorrelation function of the transition dipole moment operator of the X? H bond. The numerical calculation shows that Fermi resonances generate very complicated profiles with multisubstructure and also provide a direct evidence of Fermi resonances which were predicted to be a major feature of H‐bonds. © 2009 Wiley Periodicals, Inc. Int J Quantum Chem, 2010  相似文献   

17.
The possibility of the sequential determination of nickel with dimethylglyoxime and zirconium with arsenazo III from a single aliquot portion using polyacrylonitrile fiber as a solid phase impregnated with a KU-2 cation exchanger is studied. Conditions for the simultaneous adsorption of nickel and zirconium in the dynamic mode from 0.01 M HNO3 are found as along with the ones for their sequential determination on one disc. The calibration functions are linear in the range 5–50 ng/mL, the detection limits for both elements are 2 ng/mL. In their simultaneous presence, the determination of nickel and zirconium is not affected by 10-fold weight amounts of Fe(III), Cu(II), Co(II), Al, Mn(II), Pb, Zn, Cd, Cr(VI), Mo(VI), and V(V). A method is proposed for determining nickel and zirconium from a single aliquot portion on a single substrate disc at their ratios from 1: 1 to a 5-fold excess of each element.  相似文献   

18.
First high-resolution infrared spectra are presented for jet-cooled CH2 35Cl and CH2 37Cl radicals in the symmetric (nu1) CH2 stretching mode. A detailed spectral assignment yields refined lower and upper state rotational constants, as well as fine structure spin-rotation parameters from least-squares fits to the sub-Doppler line shapes for individual transitions. The rotational constants are consistent with a nearly planar structure, but do not exclude substantial large amplitude bending motion over a small barrier to planarity accessible with zero-point excitation. High level coupled cluster (singles/doubles/triples) calculations, extrapolated to the complete basis set limit, predict a slightly nonplanar equilibrium structure (theta approximately 11 degrees), with a vibrationally adiabatic treatment of the bend coordinate yielding a v = 1<--0 anharmonic frequency (393 cm(-1)) in excellent agreement with matrix studies (nu(bend) approximately 400 cm(-1)). The antisymmetric CH2 stretch vibration is not observed despite high sensitivity detection (signal to noise ratio >20:1) in the symmetric stretch band. This is consistent with density functional theory intensity calculations indicating a >35-fold smaller antisymmetric stretch transition moment for CH2Cl, and yet contrasts dramatically with high-resolution infrared studies of CH2F radical, for which both symmetric and antisymmetric CH2 stretches are observed in a nearly 2:1 intensity ratio. A simple physical model is presented based on a competition between bond-dipole and "charge-sloshing" contributions to the transition moment, which nicely explains the trends in CH2X symmetric versus asymmetric stretch intensities as a function of electron withdrawing group (X = D,Br,Cl,F).  相似文献   

19.
The E and Z geometric isomers of a stable silene (tBu2MeSi)(tBuMe2Si)Si=CH(1‐Ad) ( 1 ) were synthesized and characterized spectroscopically. The thermal Z to E isomerization of 1 was studied both experimentally and computationally using DFT methods. The measured activation parameters for the 1Z ? 1E isomerization are: Ea=24.4 kcal mol?1, ΔH=23.7 kcal mol?1, ΔS=?13.2 e.u. Based on comparison of the experimental and DFT calculated (at BP86‐D3BJ/def2‐TZVP(‐f)//BP86‐D3BJ/def2‐TZVP(‐f)) activation parameters, the Z?E isomerization of 1 proceeds through an unusual (unprecedented for alkenes) migration–rotation–migration mechanism (via a silylene intermediate), rather than through the classic rotation mechanism common for alkenes.  相似文献   

20.
Theoretical investigations of three equilibrium structures and two associated isomerization reactions of the GeCH(2) - HGeCH - H(2)GeC system have been systematically carried out. This research employed ab initio self-consistent-field (SCF), coupled cluster (CC) with single and double excitations (CCSD), and CCSD with perturbative triple excitations [CCSD(T)] wave functions and a wide variety of correlation-consistent polarized valence cc-pVXZ and cc-pVXZ-DK (where X = D, T, Q) basis sets. For each structure, the total energy, geometry, dipole moment, harmonic vibrational frequencies, and infrared intensities are predicted. Complete active space SCF (CASSCF) wave functions are used to analyze the effects of correlation on physical properties and energetics. For each of the equilibrium structures, vibrational second-order perturbation theory (VPT2) has been utilized to obtain the zero-point vibration corrected rotational constants, centrifugal distortion constants, and fundamental vibrational frequencies. The predicted rotational constants and anharmonic vibrational frequencies for 1-germavinylidene are in good agreement with available experimental observations. Extensive focal point analyses, including CCSDT and CCSDT(Q) energies and basis sets up to quintuple zeta, are used to obtain complete basis set (CBS) limit energies. At all levels of theory employed in this study, the global minimum of the GeCH(2) potential energy surface (PES) is confirmed to be 1-germavinylidene (GeCH(2), 1). The second isomer, germyne (HGeCH, 2) is predicted to lie 40.4(41.1) ± 0.3 kcal mol(-1) above the global minimum, while the third isomer, 2-germavinylidene (H(2)GeC, 3) is located 92.3(92.7) ± 0.3 kcal mol(-1) above the global minimum; the values in parentheses indicate core-valence and zero-point vibration energy (ZPVE) corrected energy differences. The barriers for the forward (1→2) and reverse (2→1) isomerization reactions between isomers 1 and 2 are 48.3(47.7) ± 0.3 kcal mol(-1) and 7.9(6.6) ± 0.3 kcal mol(-1), respectively. On the other hand, the barriers of the forward (2→3) and reverse (3→2) isomerization reactions between isomers 2 and 3 are predicted to be 55.2(53.2) ± 0.3 kcal mol(-1) and 3.3(1.6) ± 0.3 kcal mol(-1), respectively.  相似文献   

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