What Is XNA?

The term “xeno‐nucleic acids”, abbreviated XNA, has grown in popularity to the point that it has become a catch‐all phrase for almost any unnatural nucleic acid, raising the question: what is XNA and how does it differ from chemically modified DNA?     

Is fifth-order MBPT enough?

Fifth- and higher-order MBPT results are reported for a series of examples, BH, Be₂, HF and H₂O, for which higher-order perturbation theory might be important. MBPT(5) differs from MBPT(4) by as much as 4.3 mh, and by constructing the size-extensive [2,1] Padé approximant, which is possible with E⁽⁵⁾, one can get exceptional agreement with the full CI results. Variational perturbation results are also reported.     

Is good laboratory practice necessarily good analytical practice? Is GLP necessarily GAP?

According to the chemical legislation in force in most of the industrialized nations to protect man and the environment from the harmful effects of hazardous substances and preparations, a product must be subjected to a large number of mandatory tests before it may be marketed, to demonstrate that it shows no adverse effects on man or the environment when properly handled. To ensure that the results of tests are comparable and above all verifiable, the OECD has drawn up a set of guidelines for Good Laboratory Practice, GLP, on the request of the FDA and EPA authorities in the USA. The application of these guidelines is now mandatory for all the tests specified by the chemical legislation, also for analytical methods. These methods not only apply to the stipulated determination of physical and chemical parameters they also apply to toxicological and ecotoxicological tests. Comprehensive documentation of all stages of these tests from preparatory work to reporting is designed to make the results verifiable. Agreement with the principles of GLP means that the procedures used in a test have been documented in such a manner as to be verifiable. However, does compliance with GLP necessarily guarantee accurate analytical values and thus correct test results? Is GLP necessarily also Good Analytical Practice, GAP? In the following the authors try to provide the answer.     

A validated method for the determination of traces of UV filters in fish using LC–MS/MS

An analytical method for the determination of UV filter substances in fish tissue has been developed and validated using benzophenone-3, 3-(4-methylbenzylidene)-camphor, 2-ethylhexyl-2-cyano-3,3-diphenyl-2-propenoate and 2-ethylhexyl 3-(methoxyphenyl)-2-propenoate as target analytes. The fish fillets were homogenised and extracted by Soxhlet extraction. The extracts were run through a clean-up process including gel permeation chromatography followed by solid-phase extraction. Quantification of the compounds was performed using liquid chromatography with tandem mass spectrometric detection. Blank fish as well as spiked blank fish were analysed to validate the analytical method. The analytical method developed has the multiple advantages of enabling separation, simultaneous identification and quantification of each of the four selected compounds in a single run. Contamination of blank samples and abnormally high concentrations in spiked samples were avoided by taking extensive precautions during the fish preparation procedure. The method was validated in accordance with internationally accepted criteria, such as specificity, accuracy and repeatability. The combination of LC with tandem mass spectrometry ensures a high level of specificity. The accuracy of the method was reported as the mean recovery rate for the analytes in the sample matrix. Mean recoveries were in the range 86–108%. The precision is expressed as the relative standard deviation, and in all but one of the cases was 20% or below. The accuracy of the method allows residue analyses to be performed on biological matrices at ng/g levels. The determined limit of quantification for each analyte was 8 ng/g fish. For all spiking levels ≥8 ng/g, relative standard deviations were ≤ 20%.     

Is Water Templating Nanoporous Materials?

(H(2)O)(17), a cluster with pentagonal water arrangements, squeezed in the sodalite cage of the crystal structure MIL-74 (Zn(6)Al(12)P(24)O(96).[N(CH(2)CH(2)NH(3))(3)](8).(H(2)O)(34)), has its oxygen atoms well located by X-ray powder diffraction. Positioning of hydrogen atoms has been performed by a dynamic partial atomic charges and hardnesses analysis calculation, in which partial charges are recalculated for each hydrogen sub-network modification. Hydrogen atoms are therefore positioned by energy minimization. A quantitative estimation of the hydrogen bonds energy for each H-bond and for the network in the MIL-74 nanoporous compound has been obtained. This result allows a discussion of the effect of imprinting the nanoporous structure onto water or alternatively the templating effect of the cluster onto the inorganic framework.     

Is GVB-CI superior to CASSCF?

Presently the most reliable approach for the study of reaction pathways where chemical bonds are broken and formed is to carry out CASSCF calculations followed by corresponding multireference perturbation or CI treatments. The latter step generally relaxes the “antibonding character” of the CASSCF results. In this study we demonstrate that similar results can be well approximated by using a less optimized MCSCF method and not performing the multireference perturbation or CI step at all. This is accomplished by performing a complete CI calculation within the active orbital space of the generalized valence bond perfect pairing (GVB-PP) model. The local bond/antibond character of the orbital space of the GVB-PP method also allows development of a fast, but robust, Bethe–Goldstone algorithm, which reconstructs the CI energy to an accuracy of a few tenths of a millihartree for most types of bond breaking cases found in chemical reactions. This algorithm executes at a speed proportional to N where N_p is the number of localized electron pairs in the active space. ©1999 John Wiley & Sons, Inc. J Comput Chem 20: 999–1008, 1999     

Is Iron the New Ruthenium?

Ruthenium complexes with polypyridine ligands are very popular choices for applications in photophysics and photochemistry, for example, in lighting, sensing, solar cells, and photoredox catalysis. There is a long-standing interest in replacing ruthenium with iron because ruthenium is rare and expensive, whereas iron is comparatively abundant and cheap. However, it is very difficult to obtain iron complexes with an electronic structure similar to that of ruthenium(II) polypyridines. The latter typically have a long-lived excited state with pronounced charge-transfer character between the ruthenium metal and ligands. These metal-to-ligand charge-transfer (MLCT) excited states can be luminescent, with typical lifetimes in the range of 100 to 1000 ns, and the electrochemical properties are drastically altered during this time. These properties make ruthenium(II) polypyridine complexes so well suited for the abovementioned applications. In iron(II) complexes, the MLCT states can be deactivated extremely rapidly (ca. 50 fs) by energetically lower lying metal-centered excited states. Luminescence is then no longer emitted, and the MLCT lifetimes become much too short for most applications. Recently, there has been substantial progress on extending the lifetimes of MLCT states in iron(II) complexes, and the first examples of luminescent iron complexes have been reported. Interestingly, these are iron(III) complexes with a completely different electronic structure than that of commonly targeted iron(II) compounds, and this could mark the beginning of a paradigm change in research into photoactive earth-abundant metal complexes. After outlining some of the fundamental challenges, key strategies used so far to enhance the photophysical and photochemical properties of iron complexes are discussed and recent conceptual breakthroughs are highlighted in this invited Concept article.     

Is astaxanthin similar to ubiquinone?

Journal of Solid State Electrochemistry -     

Is the Cassie-Baxter formula relevant?

The utility of the Cassie-Baxter formula to predict the apparent contact angle of a drop on rough hydrophobic surfaces has been questioned recently. To resolve this issue, experimental and numerical data for advancing and receding contact angles are reported. In all cases considered it is seen that contact angles follow the overall trend of the Cassie-Baxter formula, except for the advancing front on pillar type roughness. It is shown that deviations from the Cassie-Baxter angle have a one-to-one correlation with microscopic distortions of the contact line with respect to its configuration in the Cassie-Baxter state.     

Is 2-cyclopropylpropene really gauche?

Infrared spectra of gaseous and solid 2-cyclopropylpropene (2-CPP, c-C3H5C (CH3)CH2) have been recorded from 3500 to 40 cm-1, and Raman spectra (3200-150 cm-1) of the liquid as well as mid-infrared spectra of 2-CPP in liquid krypton solution (from -105 to -150 degrees C) were also obtained. Ab initio calculations, with basis sets up to 6-311+G(2df, 2pd), were carried out for this molecule, using the restricted Hartree-Fock (RHF) approach, with full electron correlation by the perturbation method to second order (MP2(full)) and density functional theory (DFT) by the B3LYP method. The combination of the experimental and computational results (particularly with the higher basis sets) unequivocally identifies the more stable conformer of 2-CPP as the trans form, with the gauche rotamer higher in energy, but also stable. The cis structure of this compound is not observed experimentally, and is predicted by the computational approaches to be a transition state. By studying the temperature variation of two well-resolved sets of conformational doublets of 2-CPP dissolved in liquid krypton, an average enthalpy difference between conformers of 182+/-18 cm-1 (2.18+/-0.22 kJ mol-1) has been determined, with the trans conformation lower in energy in the fluid states, and the sole conformer present in the polycrystalline solid phase. This enthalpy difference corresponds to an ambient temperature conformational equilibrium in the fluid phases of 2-cyclopropylpropene containing approximately 55+/-2% of the more stable trans rotameric form. A complete vibrational assignment for the trans conformer of 2-CPP is given, and many of the bands of the gauche rotamer have also been assigned. Structural parameters, dipole moments, and rotational constants for this molecule have been calculated at the MP2(full)/6-311+G(d,p) level, and these results--as well as the results from the experimental studies--are compared to similar quantities in related compounds.     

Is the Chandler Period Stable?

The problem on the Chandler period is an unsolved one. Several authors suggested a hypothesis that the Chandler wobble is only one free period which slightly changes in time and is amplitude-dependent. In this paper, we shall examine the hypothesis more rigorous than that which has been carried yet. A new deconvolution method for Fourier transform is suggested. Using this method, the polar motion data since 1900 are analysed and the varying process of the Chandlerian period and amplitude are given. The analytical results show that the Chandler period is not stable and is indeed amplitude-dependent. The probable explanation for this phenomenon is that it might be caused by non-equilibrium response of the ocean.     

Is styrene planar in liquid phases?

The proton NMR spectra of two (13)C-labeled isotopomers of styrene dissolved in two liquid crystalline solvents have been obtained and analyzed to yield four sets each of 24 dipolar couplings. These couplings were then used to investigate the structure of the ring and the ene fragments of the molecule, and the position of the maximum, phi(0), in the ring-ene bond rotational probability distribution. To do this, the effect on the dipolar couplings of small-amplitude vibrational motion was taken into account using vibrational wave functions calculated by molecular orbital and density functional methods. It is concluded that the NMR data are consistent with the ring fragment, averaged over the ring-ene rotation, planar, while the ene fragment is not. The value of phi(0) is found to be 18.0 degrees +/-0.2 degrees for the two solutions, compared with a value of 27 degrees calculated by the molecular method MP2/6-31G(*).     

Is osmium diboride an ultra-hard material?

We report first-principles calculations of ideal tensile and shear strength for the recently synthesized orthorhombic OsB2 that is a primary example of a new class of ultra-hard materials synthesized by combining small, light, and covalent elements with large, electron-rich transition metals. Our calculations show that the shear strength on the (001) plane is highly anisotropic with a low peak stress of 9.1 GPa in the (001)[010] shear direction but a much higher peak stress of 26.9 GPa in the (001)[100] direction. The strong resistance against (001)[100] shear deformation prevents the indenter from making a deep imprint, giving rise to a high Vickers hardness on the (001) plane, despite the weak shear strength in the (001)[010] shear direction. The calculated peak stress of 26.9 GPa in the (001)[100] shear direction agrees well with the 30 GPa Vickers hardness observed experimentally on the (001) plane in OsB2. However, the weak shear strength (9.1 GPa) in the (001)[010] shear direction severely limits its application as abrasives and cutting tools for ferrous metals as well as scratch-resistance coatings. Our results highlight the importance of understanding atomistic deformation modes under various loading conditions in designing new ultra-hard materials.