Strong phenyl-perfluorophenyl π-π stacking and C-H?F-C hydrogen bonding interactions in the crystals of the corresponding aromatic aldimines

The X-ray diffraction analysis of two co-crystals, 1·2 (aldimines 1 and 2) and 3·4 (aldimines 3 and 4), reveals that there are strong phenyl-perfluorophenyl π-π stacking and intermolecular hydrogen bonding interactions. The new perfluoroaryl-aryl face-to-face interaction of the crystalline aldimines provides a design motif for a new class of self-assembling system.     

Synthesis, structures, and thermolysis of new heterometallic cobalt, nickel, and copper complexes with the [Ru(NO)(NO2)4(OH)]2− anion as a ligand

Heterometallic complexes with pyridine-N-oxide (PyO), Ru(NO)(NO₂)₄(OH)Ni(PyO)₂(H₂O)] · CH₃COCH₃ (I), [{Ru(NO)(NO₂)₂(μ-NO₂)₂(μ-OH)Co}₂(μ-PyO)] · H₂O · CH₃COCH (II), and [Ru(NO)(NO₂)₄(OH)Cu(PyO)₂ (III), are isolated in the reactions of Na₂[Ru(NO)(NO₂)₄(OH)] with nitrates of the corresponding metals in the presence of the organic ligand. The compounds synthesized are characterized by IR spectra, thermal analysis, and X-ray diffraction analysis. Depending on the M²⁺ cation, the ruthenium cation is coordinated through the bidentate (III, Cu²⁺) or tridentate (I, Ni²⁺ and II, CO₂₊) mode involving the bridging OH group and one or two NO₂ groups. The thermal decomposition of complex II results in the formation of a Co_0.5Ru_0.5 solid solution, which is thermodynamically stable under the decomposition conditions. The thermolysis of complexes I and III in a hydrogen atmosphere leads to the formation of metastable solid solutions.     

The Friedel-Crafts Acylation of Substituted Benzene with 2 - Phenylfuran-3, 4-dicarboxylic Acid Anhydride

TheFriedel-Craftsacylationreactions'-2areofparticularvalueowingt0theselectivityandeasewithwhichtheyareusuallyacc0mPlished,thusprovidingusefulroutestohighlyfimctionalinedar0maticringsystems.Sincesesamin-grouPlignanshavetW0aro-maticmoieties,theaPplicationoftheFriedel-CraftsacylationreactioninourstratCgyforsynthesisofsuchlignansseemedprondsing.Hence,titlecomPoundlwaschosenastheacylatingagenttoexaminesuchfeasibility.Ourresearchw0rkwasstartedfrom2,4-diphenyloxazole2,theprepaxation0fwhichwasgrea…     

Chiral Pt(II)/Pd(II) pincer complexes that show C-H?Cl hydrogen bonding: Synthesis and applications to catalytic asymmetric aldol and silylcyanation reactions

A chiral C₂-symmetric NCN ligand, (5R,7R)-1,3-bis(6,6-dimethyl-5,6,7,8-tetrahydro-5,7-methanoquinolin-2-yl)benzene has been synthesized. A direct cyclometalation of this ligand with K₂MCl₄ (M = Pt, Pd) in dry acetic acid offered the corresponding pincer complexes, [(5R,7R)-1,3-bis(6,6-dimethyl-5,6,7,8-tetrahydro-5,7-methanoquinolin-2-yl)phenyl]platinum(II) chloride 5a and its palladium(II) analogue 5b. The Pt(II) and Pd(II) complexes 5 were characterized by NMR spectroscopy, and X-ray crystal structure analysis was done for the Pt(II) complex. The NMR data for both the complexes and X-ray crystal structural data for the chloro-Pt(II) complex indicate the existence of intramolecular C-H?Cl hydrogen bonding both in solution and in solid states. Chloride abstraction from 5a by treatment with silver triflate resulted in the corresponding triflate complex 6a, which generates the corresponding cationic aqua complex 7a in the presence of water molecules. The Pt(II) complex 6a/7a was used as asymmetric catalyst in the aldol reaction between methyl isocyanoacetate and aldehydes and also in the silylcyanation of aldehydes.     

The influence of the non-coordinated ClO4− ion on the bonding mode of SCN group in copper(II) complexes with polyamines

A new series of compounds of general formula Cu L(SCN)_x(ClO₄)_2−x (where x = 0, 1, 2 and L = bis(ethylenediamine); bis (N, N-diethylethylenediamine); bis (N, N, N′, N′-tetramethylethylenediamine), bis(1, 2-diaminopropane), diethylenetriamine, N, N, N′, N″, N″-pentamethyldiethylenetriamine, 2, 2′, 2″-triaminotriethylamine, tris(2-dimethylaminoethyl) amine, have been prepared. I.R., electronic spectra and conductivity values in MeOH and in MeNO₂ were measured to elucidate the bonding mode of thiocyanate and the stereochemistry of the compounds isolated. The presence of a ClO₄⁻ ion favours the MNCS bonding only for peculiar sterochemistries and steric factors have generally a predominant influence rather than electronic factors in the bonding mode of the thiocyanate group. The results have been correlated with those previously obtained.     

Are carboxyl groups the most acidic sites in amino acids? Gas-phase acidity, H/D exchange experiments, and computations on cysteine and its conjugate base

Hydrogen-deuterium exchange experiments were carried out on the conjugate base of cysteine with four different deuterated alcohols. Three H/D exchanges are observed to take place in each case, and a relay mechanism which requires the SH and CO2H groups to have similar acidities and subsequently proceeds through a zwitterionic intermediate is proposed. Gas-phase acidity measurements also were carried out in a quadrupole ion trap using the extended kinetic method and in a Fourier transform mass spectrometer by an equilibrium determination. The results are in excellent accord with each other and high-level ab initio and density functional theory calculations and indicate that the side-chain thiol in cysteine is more acidic than the carboxyl group by 3.1 kcal mol-1. Deprotonated cysteine is thus predicted to be a thiolate ion. A zwitterionic species also was located on the potential energy surface, but it is energetically unfavorable (+10.1 kcal mol-1).     

With regard to the hydrogen bonding in complexes of pyridylureas, less is more. a role for shape complementarity and CH...O interactions?

A pyridylurea.tetraazaanthracenedione complex with three hydrogen bonds is more stable than an analogous complex with four hydrogen bonds. An X-ray analysis and modeling suggests a steric mismatch destabilizing the latter and a CH...O contact enhancing the stability of the former.     

C-X···π halogen and C-H···π hydrogen bonding: interactions of CF3X (X = Cl, Br, I or H) with ethene and propene

Using FTIR and Raman spectroscopy, the formation of halogen bonded complexes of the trifluorohalomethanes CF(3)Cl, CF(3)Br and CF(3)I with ethene and propene dissolved in liquid argon has been investigated. For CF(3)Br and CF(3)I, evidence was found for the formation of C-X···π halogen bonded 1:1 complexes. At a higher ratio of CF(3)I/propene, weak absorptions due to a 2:1 complex were also observed. Using spectra recorded at different temperatures, the complexation enthalpies for the complexes were determined to be -5.3(2) kJ mol(-1) for CF(3)Br·ethene, -7.5(2) kJ mol(-1) for CF(3)I·ethene, -5.6(1) kJ mol(-1) for CF(3)Br·propene, -8.8(1) kJ mol(-1) for CF(3)I·propene and -16.5(6) kJ mol(-1) for (CF(3)I·)(2)propene. The complexation enthalpies of the hydrogen bonded counterparts, with CF(3)H as the Lewis acid, were determined to be -4.6(4) kJ mol(-1) for CF(3)H·ethene and -5.1(2) kJ mol(-1) for CF(3)H·propene. For both hydrogen bonded complexes, a blue shift, by +4.8 and +4.0 cm(-1), respectively, was observed for the C-H stretching mode. The results from the cryospectroscopic study are compared with ab initio calculations at the MP2/aug-cc-pVDZ(-PP) level.     

Conformational landscape and hydrogen bonding in (S)-(−)-perillyc acid: experimental VCD,IR, Raman,and theoretical DFT studies

(S)-(?)-Perillyc acid (4-isopropenylcyclohexene-1-carboxylic acid) is an intermediate in the limonene and pinene pathway degradation and its measurement in urine is used to monitor cancer patients receiving oral limonene. For the first time, a theoretical study of the conformational preference in the monomer and H-bonded dimers complemented with a theoretical and experimental analysis of the infrared, raman, and vibrational vircular dichroism spectra of (S)-(?)-perillyc acid in solution and solid phases is presented. With regard to the monomer, theoretical calculations revealed the existence of two conformers depending on the position of the isopropenyl group (axial and equatorial) and 24 rotamers (12 equatorials and 12 axials). The study of the H-bonded dimers revealed great complexity in the conformational landscape with a total of 36 structures studied. Herein, from a reliable assignment of the IR and Raman spectra and with help from the study of the VCD spectrum of the title compound, the most stable rotamers of the H-bonded complexes have been detected experimentally in the liquid and solid phases. Additionally, natural bond orbitals (NBO) analysis indicates an electronic delocalization between the two subunits in the dimer. The IR, Raman, and VCD are helpful and complementary techniques to characterize flexible systems, such as terpenes, which present several conformers and H-bonded aggregates.     

Raman intensities of liquids: absolute scattering activities and ClO bond EOPs of ClO−, ClO−2, ClO−3 and ClO−4 ions in aqueous solution

Absolute Raman scattering activities of aqueous solutions of the following ions have been measured: ClO⁻, ClO⁻₂, ClO⁻₃, ClO⁻₄. Electro-optical parameters (EOPs) for the ClO bonds in these compounds were calculated. Equilibrium bond polarizabilities and their derivatives with respect to bond length can be correlated with the number of valence electrons in non-bonding and antibonding orbitals. High equilibrium bond polarizability goes with small polarizability derivatives, and vice versa, for the compounds studied here.     

Oxidation and coupling of β-diketiminate ligand in lanthanide complexes: novel eight-nuclear lanthanide clusters with μ-, μ3-Cl, and μ4-O bridge

Two novel eight-nuclear lanthanide oxide and chloride clusters Ln(8)(μ-η(2)-L(4))(2)(μ(3)-Cl)(4)(μ-Cl)(10)(μ(4)-O)(3)(THF)(8) (Ln = Er(3), Dy(4); L(4) = [OC{(Me)CN-2,6-(i)PrC(6)H(3)}(2)](2-)) have been synthesized by the reaction of β-diketiminate rare-earth metal chlorides with oxygen, providing a new oxidation and coupling reaction of the β-diketiminate ligand.     

Improper or classical hydrogen bonding? A comparative cryosolutions infrared study of the complexes of HCClF(2), HCCl(2)F,and HCCl(3) with dimethyl ether

Complexes of haloforms of the type HCCl(n)F(3-)(n) (n = 1-3) with dimethyl ether have been studied in liquid argon and liquid krypton, using infrared spectroscopy. For the haloform C[bond]H stretching mode, the complexation causes blue shifts of 10.6 and 4.8 cm(-1) for HCClF(2) and HCCl(2)F, respectively, while for HCCl(3) a red shift of 8.3 cm(-1) is observed. The ratio of the band areas of the haloform C[bond]H stretching in complex and monomer was determined to be 0.86(4) for HCClF(2), 33(3) for HCCl(2)F, and 56(3) for HCCl(3). These observations, combined with those for the HCF(3) complex with the same ether (J. Am. Chem. Soc. 2001, 123, 12290), have been analyzed using ab initio calculations at the MP2[double bond]FC/6-31G(d) level, and using some recent models for improper hydrogen bonding. Ab initio calculations on the haloforms embedded in a homogeneous electric field to model the influence of the ether suggest that the complexation shift of the haloform C[bond]H stretching is largely explained by the electric field effect induced by the electron donor in the proton donor. The model calculations also show that the electric field effect accounts for the observed intensity changes of the haloform C[bond]H stretches.     

Dimerization of HNO in aqueous solution: an interplay of solvation effects, fast acid-base equilibria, and intramolecular hydrogen bonding?

The recent unraveling of the rather complex acid-base equilibrium of nitroxyl (HNO) has stimulated a renewed interest in the significance of HNO for biology and pharmacy. HNO plays an important role in enzymatic mechanisms and is discussed as a potential therapeutic agent against heart failure. A cumbersome property for studying HNO reactions, its fast dimerization leading to the rapid formation of N(2)O, is surprisingly far from being well understood. It prevents isolation and limits intermediate concentrations of nitroxyl in solution. In this study, a new mechanism for the HNO dimerization reaction in aqueous solution has been theoretically derived on the basis of DFT calculations. Detailed analysis of the initial reaction step suggests a reversal of the cis-trans isomer preference in solution compared to the corresponding gas phase reaction. In contrast to a gas phase derived model based on intramolecular rearrangement steps, an acid-base equilibrium model is in agreement with previous experimental findings and, moreover, explains the fundamental differences between the well studied gas phase reaction and the solvent reaction in terms of polarity, cis-trans isomerizations, and acidities of the intermediates. In the case of cis-hyponitrous acid, the calculated pK(a) values of the acid-base equilibria were found to be significantly different from the corresponding experimental value of the stable trans isomer. Under physiological conditions, N(2)O formation is dominated by the decomposition of the unstable monoanion cis-N(2)O(2)H(-) rather than that of the commonly stated cis-HONNOH.     

Are structures with Al-H bonds represented in the photoelectron spectrum of Al3O4H2-?

Photoelectron spectra of Al3O4H2- clusters formed by reactions of Al3O3- with water molecules have been interpreted recently in terms of dissociative absorption products with hydroxide and oxide anions that are coordinated to aluminum cations. Alternative isomers with Al-H bonds have lower energies, but barriers to hydrogen migrations that break O-H bonds and create Al-H bonds are high. Ab initio electron propagator calculations of the vertical electron detachment energies of the anions indicate that the species with hydrides cannot be assigned to the chief features in the photoelectron spectrum. Therefore, the previously studied dissociative absorption products are the structures that are most likely to be probed in the photoelectron spectra.     

Influence of the non-coordinated ClO4− ion on the bonding mode of SCN group in zinc(II), cadmium(II) and mercury(II) complexes with polyamines

A new series of complexes of the type M(L)(SCN)_x(ClO₄)_2−x (where M = Zn(II), Cd(II), Hg(II); L = ethylenediamine (en), N,N,N′,N′-tetramethylethylenediamine (Me₄en), diethylenetriamine (den), N,N,N′,N″,N″-pentamethyl-den (Me₅den), triethylenetetramine (trien), N,N,N′,N″N‴N‴-examethyl-trien (Me₆-trien), bis (ethylenediamine) (en₂); x = 2, 1) have been prepared. Conductivity values, i.r. spectra on Nujol or on HCBD mulls, sometimes molecular weight determinations and NMR measurements in DMSO-d₆ were carried out. The results suggest that the bonding mode of SCN group depends mainly of the metallic ion. It seems to depend of steric and electronic factors when a molecule of bidentate or tridentate amine in the thiocyanate perchlorate complex is present.     

5-(Naphth-1-yl)- and 5-[(1,1′-biphenyl)-4-yl]isoxazole-3-carbaldehyde oximes: Synthesis,complexes with palladium,and application in catalysis

1-(Naphth-1-yl)- and 1-[(1,1′-biphenyl)-4-yl-3,4,4-trichloro-3-buten-1-ones were synthesized by acylation of naphthalene and biphenyl with 3,4,4-trichloro-3-butenoyl chloride. Further reaction with hydroxylamine led to 5-(naphth-1-yl)- and 5-[(1,1′-biphenyl)-4-yl]isoxazole-3-carbaldehyde oximes. The latter form complexes with palladium, which possess high catalytic activity in the Suzuki reaction in aqueous and aqueous-alcoholic media.     

Syntheses,structures, and properties of transition metal complexes with 2-( n -pyridyl)benzimidazole ( n = 2, 3, and 4)

Three pyridylbenzimidazoles (2-PBIM, 3-PBIM, and 4-PBIM) have been prepared (2-PBIM: 2-(2-pyridyl)-benzimidazole, 3-PBIM: 2-(3-pyridyl)-benzimidazole, 4-PBIM: 2-(4-pyridyl)-benzimidazole). Reactions of several transition metals (Cd²⁺, Cu²⁺, Fe²⁺) with the three ligands gave four new coordination complexes, [(Cd)₂(2-PBIM)₂(CH₃COO)₄] (1), [Cu(3-PBIM)₂(CH₃COO)₂]?·?2H₂O (2), [Cu(4-PBIM)₂(CH₃COO)₂(H₂O)]?·?H₂O (3), and [Fe(4-PBIM)₂(Cl)₂(H₂O)₂] (4), respectively. These four complexes have been characterized by X-ray crystallography, IR spectroscopy, and UV absorption spectroscopy. Thermogravimetric properties of 2 and 4 were also measured. X-ray crystallographic studies reveal that these four complexes are very different, although the ligands are similar in structure. The role of hydrogen-bonding and π–π interactions in extending dimensionality of simple complexes has been discussed.     

Structural and bonding aspects of molybdenum tricarbonyl complexes of 2,4,6-tritertiarybutyl-1,3,5-triphosphabenzene,P3C3But3 and some λ3,λ3,λ5- and λ3,λ5,λ5-alkylated derivatives

The molecular structure of the previously reported compound [Mo(CO)₃(η⁶-P₃C₃Bu^t₃)] has been determined by a single-crystal X-ray diffraction study. Syntheses and molecular structures are also described for the structurally related compounds [Mo(CO)₃(η⁵-P₃C₃Bu^t₃)(Me)(Buⁿ)], [Mo(CO)₃(η⁵-P₃C₃Bu^t₃)(H)(Buⁿ)] and [Mo(CO)₃(η⁴-P₃C₃Bu^t₃(Me)(Buⁿ)(H)(O)Li(THF)₃]. Density functional calculations at the B3LYP/cc-pVDZ(-PP) and BP86/cc-pVDZ(-PP) levels have been carried out on the above complexes and the nature of the bonding between the different rings and molybdenum is discussed. ³¹P NMR spectroscopic evidence is presented for the existence of the novel complex [Mo(CO)₃(η⁶-P₃C₃Bu^t₃)PtCl₂(PEt₃)] in which the triphosphabenzene ring acts as an overall 8-electron donor to the two metal centres.