Voltammetric detection of avidin and biotin by biotin labeled with cysteine

An avidin-biotin assay was developed from a voltammetric procedure using biotin labeled with cysteine. Mercury(II) as a marker was used to detect avidin and biotin, because the oxidation wave of mercury decreases when the cysteine part of labeled biotin(LB) complexes with mercury(II).The formation of the mercury(II)-cysteine complex is suppressed when the LB binds to the biotin site of avidin. Accordingly, the concentration of avidin can be estimated from the increasing mercury peak current. Detection of biotin is also carried out by a competitive reaction of biotin and the LB to the binding site on avidin, where the addition of biotin decreases the peak current of mercury. Limits of detection for avidin and biotin were in the 10^–9 mol/L range. The length of the spacer between the cysteine and biotin was investigated. It was observed that the strength of binding increased with increasing length of spacer. Size considerations rules out steric influences, so it is suggested that the binding constant depends on hydrophobic interactions in the binding site.     

Biotin ligands labeled with daunomycin as an electrochemical probe for avidin and biotin interaction

Electroactive biotin ligands were prepared by the reaction of daunomycin with biotinylating reagents with a different spacer. These biotin ligands exhibited similar electrochemical properties to those of daunomycin, but the adsorptivity of the ligands on the electrode increased with increasing length of the spacer. The electrode response of these ligands decreased when specifically bound with avidin. This made it possible to detect electroinactive avidin indirectly. Biotin was detected by observing the competitive reaction between biotin and the ligands for the limited binding sites of avidin. The binding strength of the labeled biotins with avidin was compared with that of unlabeled biotin by using an enzyme assay.     

Quantitative FT-IRRAS spectroscopic studies of the interaction of avidin with biotin on functionalized quartz surfaces

The interaction of avidin with biotin was studied on functionalized quartz surfaces terminated with 3-aminopropyltrimethoxysilane (3-APTMS), 2,2'-(ethylenedioxy)bis(ethylenediamine) (DADOO), and fourth-generation amine-terminated polyamidoamine (G4-NH2 PAMAM) dendrimers with the use of Fourier transform infrared reflection-absorption spectroscopy (FT-IRRAS). In particular, the molecular recognition ability of these surfaces was quantified through FT-IRRAS in combination with the use of an alkyne dicobalt hexacarbonyl probe coupled with avidin. The degree of nonspecific adsorption of avidin was determined by exposure of the amine-terminated and/or biotinylated surfaces to solutions of biotin-saturated avidin. The results indicate that the biotinylated 3-APTMS layer exhibits a very low specific binding capacity for avidin (on the order of 0.15 pmol of avidin/cm2) and substantial nonspecific adsorption. Both the binding capacity and the specificity were greatly improved when the 3-APTMS layer on quartz was modified through serial chemisorption of glutaraldehyde (GA), DADOO, and/or G4-NH2 PAMAM dendrimer layers. Among these layers, the biotinylated G4-NH2 PAMAM dendrimer layer exhibited the highest capacity for avidin binding (2.02 pmol of avidin/cm2) with a specificity of approximately 90%. This effect can be attributed to the efficient packing/ordering of the binding dendrimer layer, leading to a more dense and better organized layer of biotin headgroups on the subsequent biotinylated surface.     

An analysis of avidin, biotin and their interaction at attomole levels by voltammetric and chromatographic techniques

The electroanalytical determination of avidin in solution, in a carbon paste, and in a transgenic maize extract was performed in acidic medium at a carbon paste electrode (CPE). The oxidative voltammetric signal resulting from the presence of tyrosine and tryptophan in avidin was observed using square-wave voltammetry. The process could be used to determine avidin concentrations up to 3 fM (100 amol in 3 l drop) in solution, 700 fM (174 fmol in 250 l solution) in an avidin-modified electrode, and 174 nM in a maize seed extract. In the case of the avidin-modified CPE, several parameters were studied in order to optimize the measurements, such as electrode accumulation time, composition of the avidin-modified CPE, and the elution time of avidin. In addition, the avidin-modified electrode was used to detect biotin in solution (the detection limit was 7.6 pmol in a 6 l drop) and to detect biotin in a pharmaceutical drug after various solvent extraction procedures. Comparable studies for the detection of biotin were developed using HPLC with diode array detection (HPLC-DAD) and flow injection analysis with electrochemical detection, which allowed biotin to be detected at levels as low as 614 pM and 6.6 nM, respectively. The effects of applied potential, acetonitrile content, and flow rate of the mobile phase on the FIA-ED signal were also studied.     

Synthesis and properties of cationic polyelectrolyte with regioregular polyalkylthiophene backbone and ionic‐liquid like side groups

High‐regioregular poly{3‐[6‐(1‐methylimidazolium‐3‐yl)hexyl]thiophene‐2,5‐diyl bromide}, PMHT‐Br, has been prepared by reaction of high‐regioregular (above 92%) poly[3‐(6‐bromohexyl)thiophene‐2,5‐diyl] with 1‐methylimidazole. PMHT‐Br is soluble in water and water miscible solvents such as methanol, DMSO and shows solvatochromism; λ_max (nm): 423 (H₂O); 435 (MeOH); 452 (DMSO). Increased absorption band broadening observed for aqueous solution as well as NMR spectra in D₂O suggests a micelle‐like structure of PMHT‐Br molecules in these solutions: poly(3‐hexylthiophene) core and 1‐methylimidazolium bromide shell. Despite the disturbing effect of ionic groups, the solid‐state PMHT‐Br shows absorption maximum at 520 nm, the band edge at 660 nm (ca. 1.9 eV), and fluorescence emission with maximum at 635 nm, in a good agreement with the polymer regioregularity. Fluorescence emission maxima: λ_em (nm): 598 (H₂O); 562 (MeOH); 574 (DMSO), occur in a vicinity of corresponding adsorption band edges. Plot of electrical conductivity of PMHT‐Br (measured under the dynamic vacuum conditions, 5 × 10^?5 Pa) versus 1/T shows a break at about 70 °C same as the temperature dependence of λ_max of the solid PMHT‐Br. These breaks indicate an increase in the mobility of polymer segments and ions within PMHT‐Br; however, a thermal analysis did not provide solid evidence for it. © 2010 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 48: 3073–3081, 2010     

Structure and morphology control in thin films of regioregular poly(3‐hexylthiophene)

This review focuses on the structural control in thin films of regioregular poly(3‐hexylthiophene) (P3HT), a workhorse among conjugated semiconducting polymers. It highlights the correlation existing between processing conditions and the resulting structures formed in thin films and in solution. Particular emphasis is put on the control of nucleation, crystallinity and orientation. P3HT can generate a large palette of morphologies in thin films including crystalline nanofibrils, spherulites, interconnected semicrystalline morphologies and nanostructured fibers, depending on the elaboration method and on the macromolecular parameters of the polymer. Effective means developed in the recent literature to control orientation of crystalline domains in thin films, especially by using epitaxial crystallization and controlled nucleation conditions are emphasized. © 2011 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 49: 1218–1233, 2011     

A study on solution deposited CuSCN thin films: Structural,electrochemical, optical properties

A cost-effective successive ionic layer adsorption and reaction (SILAR) method was used to deposit copper (I) thiocyanate (CuSCN) thin films on glass and steel substrates for this study. The deposited thin films were characterized for their structural, morphological, optical and electrochemical properties using X-ray diffraction (XRD), scanning electron microscopy (SEM), UV–visible spectroscopy and VersaSTAT potentiostat. A direct band gap of 3.88 eV and 3.6 eV with film thickness of 0.7 μm and 0.9 μm was obtained at 20 and 30 deposition cycles respectively. The band gap, microstrain, dislocation density and crystal size were observed to be thickness dependent. The specific capacitance of the CuSCN thin film electrode at 20 mV/s was 760 F g⁻¹ for deposition 20 cycles and 729 F g⁻¹ for deposition 30 cycles.     

Hydrodynamic interaction between spheres coated with deformable thin liquid films

In this article, we considered the hydrodynamic interaction between two unequal spheres coated with thin deformable liquids in the asymptotic lubrication regime. This problem is a prototype model for drop coalescence through the so-called "film drainage" mechanism, in which the hydrodynamic contribution comes dominantly from the lubrication region apart from the van der Waals interaction force. First, a general formulation was derived for two unequal coated spheres that experienced a head-to-head collision at a very close proximity. The resulting set of the evolution equations for the deforming film shapes and stress distributions was solved numerically. The film shapes and hydrodynamic interaction forces were determined as functions of the separation distance, film thickness, viscosity ratios, and capillary numbers. The results show that as the two spheres approach each other, the films begin to flatten and eventually to form negative curvature (or a broad dimple) at their forehead areas in which high lubrication pressure is formed. The dimple formation occurs earlier as the capillary number increases. For large capillary numbers, the film liquids are drained out from their forehead areas and the coated liquid films rupture before the two films "touch" each other. Meanwhile, for small capillary numbers, the gap liquid is drained out first and the two liquid films eventually coalesce.     

Highly transparent solution processed In-Ga-Zn oxide thin films and thin film transistors

Highly transparent In-Ga-Zn oxide (IGZO) thin films were fabricated by spin coating using acetate- and chlorate-based precursors, and thin film transistors (TFTs) were further fabricated employing these IGZO films as the active channel layer. The impact of the post-annealing temperature on the physical properties of IGZO films and performance of IGZO TFTs were investigated. Compared to the nitrate-based IGZO precursor, the chlorate-based precursor increases the phase change temperature of IGZO thin films. The IGZO films changed from amorphous to nanocrystalline phase in an annealing temperature range of 600–700 °C. The transparency is more than 90% in the visible region for IGZO films annealed with temperatures higher than 600 °C. With the increase of post-annealing temperature, the carrier concentration of IGZO film decreases, while the sheet resistance increases firstly and then saturates. The bottom-gate TFT with IGZO channel annealed at 600 °C in oxygen showed the best performance, which was operated in n-type enhancement mode with a field effect mobility of 1.30 cm²/V s, a threshold voltage of 10 V, and a drain current on/off ratio of 2.5 × 10⁴.     

Formation of gold-silver nanowires in thin surfactant solution films

Thin, long gold/silver nanowires were grown on substrates in thin surfactant solution films. This growth process occurred exclusively in thinning aqueous films as the water evaporated, and elongated surfactant template structures were formed. The nanowire growth depended on the presence of a relatively high concentration of silver ions (typical Ag:Au mole ratio of 1:1). Tuning the pH value to about 5 in the growth solution was crucial for the nanowire growth. Further development of this process may lead to a simple wet chemical technique for the fabrication of relatively uniform arrays of metal nanowires on surfaces.     

Modeling disorder in polymer aggregates: the optical spectroscopy of regioregular poly(3-hexylthiophene) thin films

Absorption and emission in polymer aggregates is studied theoretically, taking into account excitonic (intermolecular) coupling, exciton-phonon (EP) coupling, and disorder, all treated on equal footing within a generalized Holstein Hamiltonian with numerically generated eigenmodes and energies. The disorder is modeled as a Gaussian distribution of molecular transition frequency offsets of width sigma and spatial correlation length l(0). Both herringbone (HB) and lamellar aggregate morphologies are considered. The emission spectral line shape is shown to undergo marked changes in response to increasing disorder, with the intensity of the ac-polarized 0-0 emission peak generally increasing relative to the replica intensities (0-1,0-2,[ellipsis (horizontal)]) as sigma increases and/or as l(0) decreases. This is contrary to the behavior of the b-polarized component of the 0-0 intensity, which, in HB aggregates, decreases with increasing disorder. Comparisons are made to analogous trends in oligomer aggregates. Analytical results are obtained in the strong EP coupling regime appropriate for conjugated polymers while treating the disorder perturbatively. A method for uniquely determining sigma and l(0) from the emission and absorption spectra is presented. Applications are made to absorption and low-temperature emission in thin films of regioregular poly(3-hexylthiophene), with excellent agreement between theory and experiment obtained for a spatial correlation length of only 3-4 molecules.     

Structural transitions of nanocrystalline domains in regioregular poly(3‐hexyl thiophene) thin films

The effects of solution processing and thermal annealing on thin film morphology and crystalline structures of regioregular poly(3‐hexyl thiophene) (RR P3HT) are studied in terms of molecular weight (M_w). Using grazing‐incidence X‐ray diffraction, π‐conjugated planes in drop‐cast films from chloroform solutions are found to be preferentially oriented parallel to the substrates regardless of M_w. However, the mesoscale nanocrystalline morphology of the drop‐cast films is significantly affected by M_w, exhibiting a distinctive morphological transition from short nanorods to long nanofibrils above a critical number‐averaged M_w (～ 3.6 kDa). This is probably due to the change in a conformation change from an extended‐chain to a folded‐chain, as M_w of RR P3HT increases. In contrast, spin‐casting of high M_w RR P3HT produces less ordered films with a lower crystallinity and mixed parallel/perpendicular orientations of π‐conjugated planes. The crystallinity and parallel π‐conjugated orientation of RR P3HT in spin‐cast films could be improved by thermal treatments at high‐temperatures either (1) above the glass transition temperature or (2) above the melting temperature of RR 3PHT followed by recrystallization upon cooling under vacuum. However, the charge mobility of the spin‐cast films for a field‐effect transistor application is still lower than that of the drop‐cast films. This would be attributed to the chain oxidation and the development of distinct grain boundaries between RR P3HT nanofibrils during the thermal treatments. © 2007 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 45: 1303–1312, 2007     

Chemical solution deposited thin films of titanium,chromium, zirconium,and tin oxides

TiO₂, Cr₂O₃, ZrO₂, and SnO₂ films with thicknesses of ～10–100 nm were produced via dipping into solution and subsequent annealing in air. The films were studied by the methods of scanning electron microscopy, elemental X-ray spectral analysis, optical spectroscopy, and X-ray diffraction. The electrical conductivity of the films in air and in a vacuum was measured. The adhesion of most of the films to the substrate was found to be high. A crystalline structure was observed for films thicker than 10 nm. The films have a specific surface resistance of 10⁸–10¹² Ω in air and 10⁹–10¹⁴ Ω in a vacuum. The films are promising as coatings for various purposes, including the development of structures of the core–shell type.     

Stimuli-sensitive thin films prepared by a layer-by-layer deposition of 2-iminobiotin-labeled poly(ethyleneimine) and avidin

Layered thin films composed of avidin and 2-iminobiotin-labeled poly(ethyleneimine) (ib-PEI) were prepared by a layer-by-layer deposition of avidin and ib-PEI on a solid surface, and the disintegration induced by changing environmental pH and adding biotin in the solution was studied. The avidin/ib-PEI layered film could be deposited only from the solutions of pH 10-12. The film did not form in pH 9 or more acidic media because of a low affinity of protonated 2-iminobiotin residues in ib-PEI to avidin. The avidin/ib-PEI layered films were stable in pH 8-12 solutions, while in pH 5-7 media the film decomposed spontaneously as a result of the protonation to 2-iminobiotin residues in ib-PEI. The avidin/ib-PEI films were disintegrated also upon addition of biotin and analogues in the solution owing to the preferential binding of biotin or analogues to the binding site of avidin. The decomposition rate was arbitrarily controlled by changing the type of stimulant (biotin or analogues) and its concentration. The avidin/ib-PEI films were disintegrated rapidly by addition of 10(-)(5) M of biotin or desthiobiotin, while the rate was slower upon adding the same concentration of lipoic acid or 2-(4'-hydroxyphenylazo)benzoic acid. On the other hand, the film was fully decomposed within 1 min in the 10(-)(3) M lipoic acid or 2-(4'-hydroxyphenylazo)benzoic acid solution. Thus, the decomposition rate is highly dependent on the concentration of the stimulants. It was observed that the stimuli-induced decomposition of the films is slow at pH 12, in contrast to a rapid decomposition in pH 8 medium due to a low affinity of the protonated 2-iminobiotin to avidin. The present system may be useful for constructing stimuli-sensitive devices that can release drug or other functional molecules.     

Specific interaction of desthiobiotin lipids and water-soluble biotin compounds with streptavidin

As shown for biotin lipids (Ref. 1), the formation of perfect 2-D crystalline streptavidin domains can also be observed in the plane of desthiobiotin lipid monolayers. The binding constant of streptavidin with desthiobiotin (K_a = 5·10¹³ mol⁻¹) is lower than that with biotin (K_a = 10¹⁵ mol⁻¹) (Ref. 2). By adding free biotin into the subphase a competitive replacement and a detaching of the streptavidin domains from the desthiobiotin lipid monolayer takes place. Streptavidin domains built at receptor lipid monolayers are still functional. As could be shown, there are two biotin binding sites at each protein molecule that are fully accessible to biotin (Ref. 1). This can be proven by the interaction with biotinylated ferritin and fluoresceinated biotin. Further coupling of an anti-FITC-antibody can proceed and a second protein layer can be formed. Using a bifunctional biotin linker a second crystalline streptavidin layer underneath the first one can be obtained.     

Interface interaction within nanopores in thin films of an amphiphilic block copolymer and CTAB

Anion exchange membranes with semi-interpenetrating polymer network (semi-IPN) were prepared based on quaternized chitosan (QCS) and polystyrene (PS). The PS was synthesized by polymerization of styrene monomers in the emulsion of the QCS in an acetic acid aqueous solution under nitrogen atmosphere at elevated temperatures. The semi-IPN system was formed by post-cross-linking of the QCS. A hydroxyl ionic conductivity of 2.80×10(-2) S cm(-1) at 80°C and a tensile stress at break of 20.0 MPa at room temperature were reached, respectively, by the semi-IPN membrane containing 21 wt.% of the PS. The durability of the semi-IPN membrane in alkaline solutions was tested by monitoring the variation of the conductivity and the mechanical strength. The degradation of the conductivity at 80°C was about 5% by immersing the membrane in a 1 mol L(-1) KOH solution at room temperature for 72 h and at 60°C for 50 h, respectively. The tensile stress at break at room temperature could maintain about 20.0 MPa for the membrane soaking in a 10 mol L(-1) KOH solution at ambient temperature for more than 70 h. The water swelling of the semi-IPN membranes was discussed based on the stress relaxation model of polymer chains, and it obeyed the Schott's second-order swelling kinetics.     

Barrier and semiconducting properties of thin anodic films on chromium in an acid solution

The study of barrier and semiconducting properties of anodically formed oxide films on chromium in an acid solution was carried out using the Cr-quartz crystal electrode. The oxide film formation and growth occur through an anion vacancies transport via a low-field-assisted mechanism (H = 10⁶ V cm⁻¹). The anion diffusion coefficient, which quantitatively describes the transport of point defects within the growing film, was calculated from capacitance data using the Nernst-Planck equation for low-field limit approximation and Mott-Schottky analysis. The depletion region in the passive film, close to the film|electrolyte interface, dominates the semiconducting properties. The passive film on Cr in an acid solution behaves as an n-type semiconductor. An energy-band structure model of the passive film is given.     

A solution growth technique for the preparation of copper (II) selenide thin films

A solution growth technique has been developed for the deposition of thin films of copper(II) selenide on glass substrate using a copper(II) salt solution, triethanolamine, ammonia, and sodium selenosulfate as the reacting agents. The material has been characterized through X-ray powder photography, optical absorption, and Hall measurements at room temperature. The films are found to be degenerate and p type with a Moss-Burstein shifted direct band gap of 2.14 eV.