Cloning of a new allelic variant of aSaccharomyces diastaticus glucoamylase gene and its introduction into industrial yeasts

A new allelic variant of theSTA2 gene, designated asSTA2 ^K, coding for a secreted glucoamylase, was cloned. Differences were revealed both in the structural gene and in the promoter region, as compared to otherSTA genes. The most peculiar structural features ofSTA2 ^K are 1. a 1.1-kb natural deletion in its promoter located 189 nucleotides upstream of the translation start codon; and2. an Asn→ Asp single amino acid change within the putative active site of the encoded glucoamylase. Neither the presence of glucose in the medium nor the host cell's mating type constellation affected the expression level ofSTA2 ^K inS. cerevisiae. Self-replicating yeast plasmids containingSTA2 ^K were constructed and used to transform a laboratory yeast strain and various brewing strains. Pilot brewing tests with glucoamylase-secreting transformants of a brewing strain produced superattenuated beers at accelerated fermentation rates.     

Kinetics of ethanol production from carob pods extract by immobilizedSaccharomyces cerevisiae cells

Kinetics of ethanol production from carob pods extract by immobilizedS. cerevisiae cells in static and shake flask fermentation have been investigated. Shake flask fermentation proved to be a better fermentation system for the production of ethanol than static fermentation. The optimum values of ethanol concentration, ethanol productivity, ethanol yield, and fermentation efficiency were obtained at pH range 3.5–6.5 and temperature between 30–35°C. A maximum ethanol concentration (65 g/L), ethanol productivity (8.3 g/Lh), ethanol yield (0.44 g/g), and fermentation efficiency (95%) was achieved at an initial sugar concentration of 200, 150, 100, and 200 g/L, respectively. The highest values of specific ethanol production rate and specific sugar uptake rate were obtained at pH 6.5, temperature 40°C, and initial sugar concentration of 100 g/L. Other kinetic parameters, biomass concentration, biomass yield, and specific biomass production rate were maximum at pH 5.5, temperature 30°C, and initial sugar concentration 150 g/L. Under the same fermentation conditions non-sterilized carob pod extract gave higher ethanol concentration than sterilized medium. In repeated batch fermentations, the immobilizedS. cerevisiae cells in Ca-alginate beads retained their ability to produce ethanol for 5 d.     

Solid-phase thiolsulfinates for the reversible immobilization of thiols

A new method for the reversible immobilization of thiol-containing substances on agarose beads is presented. It is based on the use of thiolsulfinate (disulfide monoxide) as a solid-phase reactive group. The thiolsulfinate groups are introduced by controlled oxidation of thiol agarose. The method comprises two steps: First, mild oxidation of the agarose thiol groups to disulfide structures with potassium ferricyanide. Second, the oxidation of the so-formed agarose disulfide groups to thiolsulfinate groups by use of a stoichiometric amount of the oxidizing agent magnesium monoperoxyphtalate. The solid-phase thiolsulfinate groups react very easily with thiols, which, as a result of the reaction, will be bound to the agarose beads by disulfide bonds. The adsorbent derivative is very suitable for the reversible immobilization of low as well as high-mol-wt thiols as demonstrated with reduced glutathione, penicillamine, mercaptoethanesulfonic acid, thiolated bovine serum albumin,β-galactosidase, and ±₁-antitrypsine. Since treatment of the agarose derivatives with an excess of low-mol-wt thiols (e.g., dithiothreitol) leads to release of the bound molecules and regeneration of the original thiol groups, the reactive thiolsulfinate groups can easily be regenerated by the mentioned two-step procedure. The cycle of oxidation, binding, reduction, and reoxidation can be performed several times while retaining thiol binding capacity.     

Enhanced Inulin Saccharification by Self-Produced Inulinase from a Newly Isolated <Emphasis Type="Italic">Penicillium</Emphasis> sp. and its Application in <Emphasis Type="SmallCaps">d</Emphasis>-Lactic Acid Production

In order to find an alternative for commercial inulinase, a strain XL01 identified as Penicillium sp. was screened for inulinase production. The broth after cultivated was centrifuged, filtered, and used as crude enzyme for the following saccharification. At pH 5.0 and 50 °C, the crude enzyme released 84.9 g/L fructose and 20.7 g/L glucose from 120 g/L inulin in 72 h. In addition, simultaneous saccharification and fermentation of chicory flour for d-lactic acid production was carried out using the self-produced crude inulinase and Lactobacillus bulgaricus CGMCC 1.6970. A high d-lactic acid titer and productivity of 122.0 g/L and 1.69 g/(L h) was achieved from 120 g/L chicory flour in 72 h. The simplicity for inulinase production and the high efficiency for d-lactic acid fermentation provide a perspective and profitable industrial biotechnology for utilization of the inulin-rich biomass.     

Assessment ofBeauveria bassiana Nov. EO-1 strain,which produces a red pigment for microbial control

A new strain of the fungusBeauveria bassiana Nov. EO-1 (ATCC 74037), which produces a red pigment in solid and liquid culture, has been isolated from an infected whitefly. The red pigment was extracted and has been identified by mass spectrometry as oosporein, a potent dibenzoquinone mycotoxin. In order to assess the potential of this entomogenous fungi for microbial control purposes, a mycelium bead formulation was developed as a source for pathogenic conidial spores and oosporein production. The mycelium bead preparation was found to be a stable fungal carrier. Conidiation and germination studies have revealed the mycelium bead viability is 100% over a 1-yr period when stored at 4°C. Conidial spore production from the mycelium beads has been falling substantially per time from an initial value of 1.5 × 10⁸ spores per bead to 3 × 10⁵ spores per bead after a year storage at 4°C. However, the mycelium bead formulation continues to produce oosporein on agar media, at the same intensity throughout the 1 yr period. In in vitro and in vivo small scale greenhouse experimentsBeauveria bassiana Nov. EO-1 were compared with known entomogenous fungi,Beauveria sp. andPaceilomyces sp. Beauveria bassiana Nov. EO-1 was found to have a high pathogenicity against foliage insect pests (e.g., whiteflies and mealy bugs), and against soil insects (e.g., citrus root weevils). The utilization of a mycelium bead based on this strain,Beauveria bassiana Nov. EO-1, as a source of conidial spores and oosporein may have broad applications for the control of various insect pests.     

Studies on some enzymes of alginic acid biosynthesis in mucoid and nonmucoidAzotobacter chroococcum strains

Measurements of enzymes involved in alginate biosynthesis were straightforward in mucoid (alginate-positive)Azotobacter chroococcum ATCC 4412 crude extracts. At the stationary growth phase, where the production of the exopolysaccharide was greatest, the enzymes phosphomannose isomerase and GDP-mannose pyrophosphorylase increased markedly, whereas phosphomannomutase and GDP-mannose dehydrogenase kept the high activity levels measured in the acceleration growth phase. In nonmucoid (alginatenegative)A. chroococcum andA. vinelandii strains, the activities of phosphomannose isomerase and GDP-mannose pyrophosphorylase were rather low or, in some cases, undetectables. Except inA. chroococcum MCD1, which exhibited a low activity, phosphomanomutase was high in the nonmucoidAzotobacter strains, and GDP-mannose dehydrogenase reached a significant activity level in two out of four nonmucoid strains tested. The results suggest that derepression of phophomannose isomerase and GDP-mannose pyrophosphorylase is asine qua non condition for alginate formation byA. chroococcum.     

Production and use of glucosyltransferases fromLeuconostoc mesenteroides NRRL B-1299 for the synthesis of oligosaccharides containing α-(1→2) linkages

Glucosyltransferase activities, produced by batch culture ofLeuconostoc mesenteroides NRRL B-1299, were recovered both in the culture supernatant (SGT) and associated with the insoluble part of the culture (IGT). A total glucosyltransferase activity of 3.5 U/mL was measured in batch culture. The enzymes from the supernatant were purified 313 times using aqueous two-phase partition between dextran and PEG phases, yielding a preparation with 18.8 U/mg protein. It was shown that both SGT and IGT preparations catalyze acceptor reactions and transfer the glucose unit from sucrose onto maltose to produce glucooligosaccharides. Some of the glucooligosaccharides synthesized (L_n series) contain α-(l→6) osidic linkages and a maltose residue at the reducing end. They were completely hydrolyzed by glucoamy-lase and dextranase. The other glucooligosaccharides synthesized (Bn series) resisted the action of these enzymes. The tetrasaccharide of this series has been characterized by¹³C NMR. Its structure was determined as 2–O–α–D–glucosylpanose. The oligosaccharides synthesized by the maltose acceptor reaction with the SGT and IGT preparations only differed in the relative amounts in which they were produced. The difference may arise from diffusional limitations appearing when the insoluble catalyst is used. Under the assay conditions, the glucanase resistant oligosaccharide yield was 35% with both glucosyltrans-ferase preparations.     

A Practical System for High-Throughput Screening of Mutants of <Emphasis Type="Italic">Bacillus fastidiosus</Emphasis> Uricase

For high-throughput screening (HTS) of Bacillus fastidiosus uricase mutants, a practical system was proposed. By error-prone PCR with final 1.5 mM MnCl₂, two focused libraries of mutants for A1-V158 and V150-D212 were generated separately. After induced expression of individual clones in 48-well microplates, Escherichia coli cells (BL21) were lyzed by 1.0 M Tris-HCl at pH 9.0 in 96-well microplates at 25 °C for 7.5 ~ 10.5 h; uricase reaction was continuously monitored with 0.15 mM uric acid in 96-well plates by absorbance at 298 nm to estimate V _m/K _m by kinetic analysis of reaction curve for comparison. V _m/K _m was resistant to initial uric acid levels with an upper limit 3-fold over that of initial rates. By receiver-operator-characteristic analysis of the recognition of the one of higher activity in uricase pair whose specific activity ratio was 1.8 or 3.3, the area-under-the-curve was comparable to that with cell lysates prepared by sonication treatment. A cutoff for the maximum Youden index was thus developed to recognize positive mutants of 1-fold higher activity. Indeed, mutant L171I/Y182F/Y187F/A193S of higher activity but lower thermostability at pH 7.4 and mutant V144A of higher activity and consistent thermostability were discovered. Therefore, the proposed system was practical for HTS of uricase mutants.     

Production of l-lactic acid byRhizopus oryzae in a bubble column fermenter

Two distinctive forms of growth (mycelial filamentous and mycelial pellets) ofRhizopus oryzae were obtained by manipulating the initial pH of the medium with the controlled addition of CaCO₃ in a bubble fermenter. In the presence of CaCO₃, diffused filamentous growth was obtained when the initial pH of the substrate was 5.5. In the absence of CaCO3, mycelial pellet growth was obtained when the initial pH was 2.0. The fermentation study indicated that the mycelial growth has a shorter lag period before the onset of acid formation. Both physical forms of growth ofRhizopus exhibited a high yield of L-lactic acid in the bubble fermenter when the initial glucose concentration exceeded 70 g/L. A final lactic acid concentration of 62 g/L was produced by the filamentous form ofRhizopus from 78 g/L glucose after 27 h. This showed a weight yield of 80% of glucose consumed, with an average specific productivity of 1.46 g/h/g. Similarly, the pellet form ofRhizopus produced a final lactic acid concentration of 66 g/L from 76 g/L glucose after 43 h, with a weight yield of 86% and an average specific productivity of 1.53 g/h/g.     

Determination of reaction kinetics of barley straw using thermogravimetric analysis

Alternaria alternata is well known as a producer of tentoxin as well as some other phytotoxic substances. A new method to prepare protoplasts fromAlternaria alternata, suitable for many purposes, was developed. By use of a mixture of lytic enzymes fromHelix pomatia, andTrichoderma harzianum with the commercial preparation “novozym,” it was possible to prepare protoplasts from all stages of fungal development, including the tentoxin production phase. Optimal incubation conditions led to the conversion of 1 g (wet wt) mycelial cells into 2.3–2.5 × 10⁷ protoplasts within 3–6 h. Submerged as well as surface-grown mycelia were suitable. Optimal stabilization of protoplasts was obtained in 0.8M KCI. The protoplasts were used for both mutagenic treatment and physiological studies. UV irradiation of protoplasts resulted in formation of hyperproducing mutants. Protoplasts were able to form tentoxin. The biosynthetic activity of protoplasts from surface-grown mycelium was 40% that of intact mycelia. Although intact submerged myclia did not synthesize tentoxin, protoplasts of both types of mycelia produced this toxin, indeed protoplasts from submerged mycelia were even more active than those from surface mycelia. Neither oxygen tension nor mechanical stress during the shaking culture is the reason for the lack of tentoxin production by intact submerged mycelial pellets. Since tentoxin-synthesizing enzymes were apparently present in both mycelial types, it is probable that metabolites or lytic products in the pellets inhibit tentoxin-forming enzymes under submerged conditions.     

Some properties of a thermostable β-xylosidase fromRhodothermus marinus

The extracellular β-xylosidase (EC 3.2.1.37) excreted by the thermophilic eubacteriumRhodothermus marinus when grown on xylan has been investigated. The enzyme has been partially purified by ultrafiltration and gel filtration, and some of its characteristics are presented.Rhodothermus marinus grew on xylan with μmax= 0.4 h^? and the α-xylosidase activity was 50 nkat/mL after 24 h in a batch fermentation. The α-xylosidase activity had a half-life of more than 1 h at 90°C and of 14 h at 85 °C. At 80°C, 80% of the initial activity remained after 24 h. The initial activity increased with increasing temperature, showing maximal activity at 90°C. The β-xylosidase had a pH-optimum of 6 and was stable in the range between pH 5 and 9. At pH 10 and 11, 82 and 66%, respectively, of the initial activity remained after 24 h when incubated at 65°C. The molecular weight was estimated to be 169,000 dalton by gelfiltration.     

Acetone–Butanol–Ethanol Production from Waste Seaweed Collected from Gwangalli Beach,Busan, Korea,Based on pH-Controlled and Sequential Fermentation Using Two Strains

The optimal conditions for acetone–butanol–ethanol (ABE) production were evaluated using waste seaweed from Gwangalli Beach, Busan, Korea. The waste seaweed had a fiber and carbohydrate, content of 48.34%; these are the main resources for ABE production. The optimal conditions for obtaining monosaccharides based on hyper thermal (HT) acid hydrolysis of waste seaweed were slurry contents of 8%, sulfuric acid concentration of 138 mM, and treatment time of 10 min. Enzymatic saccharification was performed using 16 unit/mL Viscozyme L, which showed the highest affinity (K_m?=?1.81 g/L). After pretreatment, 34.0 g/L monosaccharides were obtained. ABE fermentation was performed with single and sequential fermentation of Clostridium acetobutylicum and Clostridium tyrobutyricum; this was controlled for pH. A maximum ABE concentration of 12.5 g/L with Y_ABE 0.37 was achieved using sequential fermentation with C. tyrobutyricum and C. acetobutylicum. Efficient ABE production from waste seaweed performed using pH-controlled culture broth and sequential cell culture.     

Application of a novel 1,1′-dimethylferricinimum dye for the determination of uric acid in urine

Water-soluble 2-hydroxypropyl-β-cyclodextrin (Hp-β-CyD), a cyclic and nonreducing oligosaccharide was used to enclose a hydrophobic guest molecule 1,1′-dimethylferrocene (DMF) to form a water-soluble yellow complex. At high concentrations (300 mM), Hp-β-CyD enclosed up to 100 mM DMF. The yellow complex was electrochemically oxidized (platinum vs Ag/AgCl poised at +450 mV) to form a blue dye, 1,1′-dimethylferricinium (DMF⁺). This is a one-electron transfer process and the ferricinium cation formed exhibited an absorption peak at 650 nm. The concentrated DMF⁺ was stable for at least 4 mo at 4°C and insensitive to a wide pH variation (pH 2–11). Application of the novel DMF⁺ complex as a colorimetric dye for the determination of uric acid in urine was successfully demonstrated. The reaction between the dye and uric acid is almost instantaneous and decrease in absorbance caused by the reduction of 1,1′-dimethylferricinium to 1,1′-dimethylferrocene can be followed at 650 nm. The results obtained agreed well with those of the reference reversed-phase HPLC method.     

Determination of serum <Emphasis Type="SmallCaps">d</Emphasis>-lactic and <Emphasis Type="SmallCaps">l</Emphasis>-lactic acids in normal subjects and diabetic patients by column-switching HPLC with pre-column fluorescence derivatization

d-Lactic and l-lactic acids were simultaneously determined by means of a column-switching high-performance liquid chromatography (HPLC) with fluorescence detection. As a fluorescence reagent, 4-nitro-7-piperazino-2,1,3-benzoxadiazole (NBD-PZ) was employed for the fluorescence derivatization of lactic acid. The proposed HPLC system adopted both octylsilica (Cadenza CD-C8) and amylose-based chiral columns (CHIRALPAK AD-RH), which proved to give a sufficient enantiomeric separation of the lactic acid derivatives with a separation factor () of 1.32 and a resolution (R_s) of 1.98. Moreover, the features of the first elution of d-lactic acid peak in the proposed HPLC were convenient for the determination of trace amount of serum d-lactic acid, which is known to increase under diabetes. Intra-day and inter-day accuracies were in the range of 90.5–101.2 and 89.0–100.7%, and the intra-day and inter-day precisions were 0.3–1.2 and 0.4–4.8%, respectively. The proposed method was applied to determine d-lactic and l-lactic acids in human serum of normal subjects and diabetic patients, showing that both d-lactic and l-lactic acid concentrations were significantly increased in the serum of diabetic patients (n=31) as compared with normal subjects (n=21). This fact was found for the first time owing to the development of the proposed HPLC method which is able to determine d-lactic and l-lactic acid simultaneously. Finally, serum d-lactic acid concentrations determined by the proposed HPLC method were compared with those from a reported enzymatic assay, and the smaller p value between normal subjects and diabetic patients was shown by the proposed HPLC method.     

Separation of Monovalent and Divalent Cations on a Pure Silica Gel Column with Dilute Oxalic Acid Containing 18-Crown-6 as Mobile Phase

Summary Pure silica gel (Pia Seed 5S-60-SIL) has been investigated as a cation-exchange stationary phase for ion chromatography of common monovalent and divalent cations (Li⁺, Na⁺, NH₄⁺, K⁺, Mg²⁺, and Ca²⁺) with conductimetric detection; dilute oxalic acid (0.05 mm oxalic acid, pH 4.1, to 1 mm oxalic acid, pH 3.0) was used as mobile phase. The Pia Seed 5S-60-SIL silica gel acted as a cation-exchange stationary phase for these cations when 0.2 mm oxalic acid at pH 3.6 was used as the mobile phase. Excellent simultaneous separation and highly sensitive indirect conductimetric detection of these cations were achieved in 20 min on a 150 mm × 4.6 mm i.d. Pia Seed 5S-60-SIL silica gel column with 0.2 mm oxalic acid containing 4 mm 18-crown-6 (1,4,7,10,13,16-hexaoxacycloctadecane), pH 3.7, as mobile phase (detection limits (signal-to-noise ratio, 3, injection volume, 20 L), were 0.15 m for Li⁺, 0.16 m for Na⁺, 0.21 m for NH₄⁺, 1.0 m for K⁺, 0.17 m for Mg²⁺, and 0.25 m for Ca²⁺). The proposed IC–CD method was successfully applied to the separation and detection of major cations (Na⁺, NH₄⁺, K⁺, Mg²⁺, and Ca²⁺) in rain and river water samples.     

Release of Polyphenols Is the Major Factor Influencing the Bioconversion of Rice Straw to Lactic Acid

In this study, we found that p-coumaric acid (p-CA), ferulic acid (FA), and condensed tannins were released from rice straw during saccharification. The presence of polyphenols prolonged the lag phase and lowered the productivity of lactic acid. p-CA was identified as a key inhibitor. Tannins had a lower inhibitory effect than p-CA; FA had little inhibitory effect. Acid, alkaline, and ball milling pretreatments elicited different levels of polyphenol release from rice straw. Due to the different levels of polyphenol release in the pretreatment step, the enzymatic hydrolysates contained different concentrations of polyphenols. Compared with fermentation with a synthetic medium, fermentation with the hydrolysates of ball-milled rice straw provided much lower productivity and yield of lactic acid due to the presence of polyphenols. Removal of these compounds played an important role in lactic acid fermentation. When rice straw was alkaline pretreated, the hydrolysates contained few phenolic compounds, resulting in high productivity and yield of lactic acid (1.8 g/L/h and 26.7 g/100 g straw), which were comparable to those in a synthetic medium. This indicates that there is a correlation between removal of phenolic compounds and efficiency in lactic acid fermentation.     

Invertebrate organisms as biological indicators of heavy metal pollution

Some species of invertebrate animals are known to be efficient accumulators of trace elements. Generally, metal accumulation by such organisms is based on efficient detoxification mechanisms, such as intracellular compartmentalization, or metal inactivation by binding to metallothioneins. Metal accumulators have often been used as accumulation indicators of environmental metal pollution. This means that, ideally, metal concentrations in the animal’s body reflect quantitatively or semiquantitatively environmental pollution levels. In reality, however, many factors, such as the animal’s weight and age, can disturb such quantitative relationships. These factors have, therefore, to be considered carefully before an invertebrate is utilized as accumulation indicator for metal pollution. Apart from accumulation, many invertebrates exposed to elevated metal concentrations respond to this stress by metal-induced synthesis of metallothioneins. Additionally, metallothionein in metal-loaded organisms can be present in different isoforms that are specifically synthesized in response to different metals. These facts make metallothionein a potential biomarker for metal stress in invertebrates. One possibility may be to assess parameters of metallothionein synthesis at the molecular or biochemical level. Moreover, metallothionein isoform patterns could provide information on different isoforms synthesized in response to different metals or chemicals. In any case, however, care must be taken to consider intrinsic physiological parameters, such as nutritional or developmental factors, which could also interfere with metallothionein synthesis.     

Optimization of L-Lactic acid production from glucose by Rhizopus oryzae ATCC 52311

The effect of nutrients on L(+)-lactic acid production from glucose was investigated using Rhizopus oryzae ATCC 523 11. From the shake-flask experiments, the optimal medium composition was defined for improved lactic-acid production. In order to enhance lactic-acid production rate and product yield, controlled aeration in a bubble column was conducted under optimal conditions. Results showed a maximum lactic-acid production rate of 2.58 g/L/h was obtained with an initial glucose concentration of 94 g/L. Finallactic-acid concentration of 83 g/L was achieved after 32 h of fermentation with a weight of 0.88 glactic acid/g glucose consumed.     

Efficient Regioselective Synthesis of the Crotonyl Polydatin Prodrug by <Emphasis Type="Italic">Thermomyces lanuginosus</Emphasis> Lipase: a Kinetics Study in Eco-friendly 2-Methyltetrahydrofuran

Bio-based solvents have recently been discussed as sustainable green and promising alternatives to conventional organic media for enzymatic processes. In this paper, highly regioselective synthesis of the 6″-O-crotonyl-polydatin catalyzed by Thermomyces lanuginosus lipase (TLL) in biomass-derived 2-methyltetrahydrofuran (2-MeTHF) was successfully performed for the first time. The results indicated that TLL lipase displayed significantly improved catalytic performance in 2-MeTHF than in other traditional solvents. Under the optimal conditions, the initial reaction rate, 6″-regioselectivity, and maximum substrate conversion were as high as 12.38 mM h^?1, 100 %, and 100 %, respectively. Moreover, further investigations on the operational stability, kinetic parameters like V _max, K _m, V _max/K _m, and E _a revealed that 2-MeTHF exhibited excellent biocompatibility and rendered the greener process of the enzymatic acylation.     

Immobilization of Mercuric reductase from aPseudomonas putida strain on different activated carriers

Mercuric reductase was isolated fromPseudomonas putida KT2442::mer-73 and immobilized on Chromatographic carriers activated by various methods. The immobilization methods for covalent coupling were compared with regard to preservation of enzymatic activity and coupling yields. Highest yields were obtained with carriers bearing the most reactive functional groups. Best results were achieved with tresyl chloride-activated carriers. The optimum binding conditions were found at pH 8. Application of the immobilized mercuric reductase for continuous treatment of Hg(II)-containing water was examined in a fixed bed reactor. Space-time yields up to 510 nmol/min-mL were attained. The kinetics of immobilized enzyme systems were not diffusion-controlled.