Resonant dissociative electron capture by the simplest amino acids and dipeptides

The formation of ions from amino acids (glycine and alanine) and dipeptides (glycylglycine, alanylalanine, and glycylalanine) under the resonant electron capture conditions was studied by negative ion resonant electron capture mass spectrometry. The isobaric ions were found, their effective yield curves were experimentally separated, and the elemental composition was determined. The thermochemical aspect of ion formation was considered, and probable dissociative channels of fragmentation ion formation and their structures were established on the basis of this aspect. Bond cleavage reactions only and H-shift processes were revealed. The rearrangements occur presumably through the stage of formation of intramolecular hydrogen bonds. The cross-sections of formation of ions [M − H]⁻ were measured in the energy range 1.1–1.3 eV. The metastable decay channels of ions [M − H]⁻ and [M − COOH]⁻ were found in the energy range 4.5–7.5 eV for dipeptides, which enabled establishing the genetic relationship between the parental and daughter ions and revealing hidden fragmentation pathways.     

Exotic amino acids. 4. Synthesis of methyl esters of some N-heteroamino-methylenemalonic acids

Isopropylidene N-hetarylaminomethylenemalonates, obtained from isopropylidene ethoxymethylenemalonate and 2-aminopyridine, 2-amino-5-methylpyridine, 2-aminopyrimidine, 7-amino-4-methylcoumarin, and 2-amino-3,5-diethoxycarbonyl-4-methylthiophene, undergo methanolysis at room temperature to give methyl esters of the corresponding N-hetarylaminomalonic acids. Isopropylidene N-hetarylaminomethylenenemalonate, containing a 2-aminothiazole group as a heterocyclic substituent, does not react under analogous conditions, but cyclizes upon heating at reflux to give 5-oxo-5H-thiazolo[3,2-a]pyrimidine-6-carboxylic acid. 4-Oxo-9-R-4H-pyridino[1,2-a]pyrimidines are obtained upon the sublimation of isopropylidene N-pyridyl- and N-5-methylpyridylaminomethylenemalonates.Communication 3, see ref. [1].Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 6, pp. 857–860, June, 2000.     

Resonant electron capture by uridine

Processes of the resonant electron attachment to uridine molecules have been studied in the energy range 0–14 eV. The main fragmentation channels of negative molecular ions have been determined. Long-lived negative molecular ions have been detected in the thermal energy region. It was found that these ions form in a dipole-bound state. The lifetime of molecular ions was estimated at τ_a ～ 29 × 10^?6 s.     

Resonant electron capture by Captopril molecules

Russian Chemical Bulletin - The modified dipeptide, Captopril, was studied to determine the effect of lateral functional groups on the decay of biomolecules in resonant reactions of electrons with...     

Resonant electron capture by orotic acid molecules

Resonant electron attachment by orotic acid molecules (6-COOH-uracil) are studied in the energy range of 0–14 eV via negative ion mass spectrometry. Molecular ions, whose lifetimes relative to electron autodetachment are found to be ~300 μs are recorded in the region of thermal electron energies; they form in the valence state through a vibration-excited resonance mechanism. Unlike unsubstituted uracil, most dissociative processes occur in the low-energy region of <4 eV and are due to carboxylic anions. An absolute cross section of 2.4 × 10^?17 cm² is found for the most intense fragment ions [M–H]^– at an output energy of 1.33 eV. The kinetics of decarboxylation is considered for these ions. This could be a model reaction for the last stage of uridine monophosphate biosynthesis.     

Mass spectrometry of N-(Pyrimidin-2-yl)amino acids and their methyl esters

N(Pyrimidin-2-yl)-glycine, -alanine and -phenylalanine (1-3) and their methyl esters (4-6) were investigated using electron impact (EI) mass Spectrometry. The results showed that EI-induced decomposition occurs on the carboxylic group or involves the loss of R₂OH. In contrast to earlier investigations on N-(pyrimidin-4-yl)amino acids, elimination of water (in 1-3) or methanol (in 4-6) was found to be of EI-induced nature. The loss of 'COOH from M⁺ of ester 4 suggests the occurrence of a skeletal rearrangement leading to the isomeric N-methylamino acid.     

Asymmetric synthesis of monohydroxy tetradecanoic acids and their methyl esters

Methyl 3-, 6- and 13-oxo tetradecanoates were reduced by NaBH₄ in the presence of 1,2:5,6-di-O-isopropylidene-d-glucofuranose (DIPGH) and (−)-menthol together with isovaleric and pivalic acids in THF solution. The highest enantiomeric purity was found for the 13-hydroxy ester isomer of 96% ee. Enantiomeric excess (ee, %) was determined by chiral HPLC and ¹H NMR with shift reagent, Eu(tfc)₃.     

Thermal electron capture by some halopropanes

Thermal electron attachment rate constants for CF₃CHClCH₃, CF₂ClCFClCF₃ and CBrF₂CH₂CH₂Br have been measured with electron swarm method. Corresponding rate constants are equal to 7.6×10⁻¹¹, 5.5×10⁻⁹ and 1.5×10⁻⁸ cm³ molecule⁻¹ s⁻¹, respectively. The dissociative electron attachment (DEA) spectra for nine haloalkanes have been determined using negative ion mass spectrometry. The correlation between rate constants, position of the DEA peaks and vertical attachment energy (VAE) available in literature has been demonstrated.     

Conformational study of methyl esters of some aliphatic erythro- and threo-dichlorocarboxylic acids

The average conformations of methyl esters of some aliphatic erythro- and threo-dichlorocarboxylic acids in dilute carbon tetrachloride solutions have been determined from the vicinal proton–proton coupling constants and ¹H NMR shifts. The ¹³C shift differences between the erythro and threo forms are compared and discussed with regard to the differences in the average conformations.     

Azides of N-substituted aziridine-2-carboxylic acids. Reaction with methyl esters of amino acids

The corresponding azide was obtained by nitrosation of 1-benzylaziridine-2-carboxylic acid hydrazide. Reaction of the azide with methyl esters of amino acids gave N-(1-benzyl-2-aziridinylcarbonyl)-substituted methyl esters of amino acids.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 10, pp. 1350–1352, October, 1980.     

Friedel-Crafts alkylation of benzene by normal ω-chloroalkanoic acids and their methyl esters and nitriles

Conclusions In the alkylation of benzene by -chloroalkanoic acids Cl(CH₂)_nCOOH (where n=3–6) and their methyl esters and nitriles, in the presence of A1C1₃, the degree of isomerization of the alkyl chain is less than with the corresponding 1-chloroalkanes, depending on the increase in electron acceptor activity in the sequence HOOC-> CH₃OCO-> CN-.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 2, pp. 367–371, February, 1987.     

Catalytic hydrogenation of methyl esters of some 1h-pyrazoline-3-carboxylic acids

Hydrogenation over Raney nickel of the methyl ester of 1H-pyrazoline-3-carboxylic acid and also of its 4-phenyl and 5-methoxycarbonyl-substituted analogs, leads respectively to 3-aminopyrrolidin-2-one, its 4-phenyl- and 5-methoxycarbonyl derivatives, predominantly to the trans isomer. Under the same conditions 1-amino-4-methoxycarbonylpyrrolidin-2-one was obtained from 3,4-di(methoxycarbonyl)-1H-pyrazoline, but 3,4,5-tri(methoxycarbonyl)-1H-pyrazoline did not react.     

Gas-liquid chromatographic analysis of protein amino acids as N-isobutyloxycarbonylamino acid methyl esters.

A practical method for the quantitative determination of protein amino acids by gas-liquid chromatography (GLC) is described. All of the common protein amino acids except arginine can be readily converted into their N-isobutyloxycarbonyl (N-isoBOC) methyl ester derivatives by a simple procedure involving isobutyloxycarbonylation with isobutyl chloroformate in aqueous medium, followed by methylation with diazomethane. Arginine was converted into N-isoBOC ornithine methyl ester by treatment with arginase, followed by the above derivatization procedure. The resulting N-isoBOC methyl esters of the amino acids have good GLC properties. Complete resolution of the derivatives of 20 protein amino acids was achieved by using a dual-column system consisting of a 0.65% Poly-A-101A column and a 0.70% FFAP-Poly-A-101A (1:1, w/w) column. The reproducibility of response was found to be good for derivatives carried through the entire chemical and chromatographic procedure. The calibration graphs were linear and showed no statistical bias. The results of recovery experiments with synthetic mixtures containing known amounts of the amino acids were satisfactory, the recoveries ranging from 94.3 to 106.2%.     

Dissociative electron-capture mass spectrometry of fatty acids and their pyrrolidies and methyl esters

The regions of the energies of resonance capture of electrons by the molecules of fatty acids and their pyrrolidides and methyl esters have been established, which has permitted an explanation of the difference between the dissociative electron-capture mass spectra of these compounds and their chemical ionization and fast-atom bombardment negative-ion mass spectra. It has been shown that the dissociative electron-capture mass spectra of a high-energy resonance state characterized by the most far-reaching dissociation permit the unambiguous determination of the positions of multiple bonds in the initial molecules.Pacific Ocean Institute of Bioorganic Chemistry, Far Eastern Scientific Center, Academy of Sciences of the USSR. Translated from Khimiya Priordnykh Soedinenii, No. 3, pp. 348–353, May–June, 1987.