Correlation and prediction of liquid-liquid distribution coefficients in aqueous systems using a modified Wilson model

A modified Wilson model is tested for its ability to correlate and predict distribution coefficients in two representative systems: 1-butanol-water and cyclohexanewater. The model is fitted to ternary equilibrium data for various solutes in these systems using a procedure involving minimization of the least-squares distance between calculated and experimental logarithmic distribution ratios. In addition, benzene-water, hexane-water, and cyclohexane-water distribution coefficients for infinitely diluted liquid solutes are predicted using only binary system information. All computations involve using both van der Waals and molar volumes as structural parameters to account for the geometry of the molecules studied. Satisfactory representations of experimental distribution ratios and fairly accurate distribution coefficients at infinite dilution are obtained for both systems. However, in a number of cyclohexane-water systems, miscibilities of constituent binary mixtures are poorly predicted from ternary system information when van der Waals volumes are used. Replacement of van der Waals volumes by molar volumes has little influence on the fit, but significant improvement is observed for the prediction of both binary miscibility properties and for distribution coefficients at infinite dilution in all the solvent-water systems considered.Presentation to First International Symposium on Solubility Phenomena, University of Western Ontario, London, Ontario, August 21–23, 1984.     

A model of competing van der Waals interactions for describing the physicochemical properties of binary solutions of nonelectrolytes

A model of competing van der Waals (universal) interactions was suggested for describing the excess physicochemical properties of binary systems and excess thermodynamic functions of solvation. As distinct from the Redlich-Kister and Hwang polynomials, the coefficients of this model are functionally significant and related to various mechanisms of van der Waals, in particular, electrostatic interaction manifestations as the composition of the binary solvent changes. The suggested model was used to estimate the contributions of electrostatic nonstoichiometric interactions and mutual component destructuring effects to the observed physicochemical properties of binary systems. The empirical Dimroth-Reichardt solvatochromic scale of solvent polarities for binary systems was shown to be related to the electrostatic contribution of the model.     

Tunneling Spectroscopy for Electronic Bands in Multi-Walled Carbon Nanotubes with Van Der Waals Gap

Various intriguing quantum transport measurements for carbon nanotubes (CNTs) based on their unique electronic band structures have been performed adopting a field-effect transistor (FET), where the contact resistance represents the interaction between the one-dimensional and three-dimensional systems. Recently, van der Waals (vdW) gap tunneling spectroscopy for single-walled CNTs with indium–metal contacts was performed adopting an FET device, providing the direct assignment of the subband location in terms of the current–voltage characteristic. Here, we extend the vdW gap tunneling spectroscopy to multi-walled CNTs, which provides transport spectroscopy in a tunneling regime of ~1 eV, directly reflecting the electronic density of states. This new quantum transport regime may allow the development of novel quantum devices by selective electron (or hole) injection to specific subbands.     

Repulsive interaction can be a key design element of molecular rotary motors

Low-barrier molecular rotary motors having rotaxane architecture can be constructed using a cucurbituril host and a polyyne guest serving as stator and rotator, respectively. The repulsive interaction between these components is supported by molecular mechanics calculations with model systems and experimentally verified by X-ray crystallography with several synthetic host-guest complexes, all suggesting that the diyne rod floats at the center of the macrocyclic host with no apparent van der Waals contacts between them. Further support for these interactions is suggested by microcalorimetry measurements.     

Two-dimensional self-assembly of a two-component molecular system: formation of an ordered and homogeneous molecular mesh

The formation of nanoscaled objects often relies on the two-dimensional self-assembly of organic molecules on solid substrates, leading to a number of interesting structures with nanometer dimensions. Assembly of single-component systems driven by chain-chain van der Waals interactions, hydrogen bonding, and dipolar interactions governs the structures typically formed. The two-dimensional self-assembly of a two-component molecular system is described here, where the structure involves mixing of the components at the molecular level. A mixture of 5-octadecyloxyisophthalic acid and octanoic acid forms an ordered stoichiometric array of homogeneous nanometer-sized openings of dimension 8.5 A x 13.5 A x1.8 A, verified by atomic resolution scanning tunneling microscopy. Assembly in the structure is driven by van der Waals and hydrogen bonding interactions between the molecular components.     

晶体中原子的平均范德华半径

根据晶体中原子的平均体积数据提出包括全部金属元素的原子平均范德华半径值.与现有几个重要的范德华半径体系进行了初步的比较,指出范德华半径值在应用中值得注意的问题,简要提出了有关范德华半径今后研究的方向.     

Determination of van der Waals forces in monolayer films of lipids & biopolymers. Equation of state for two-dimensional films

Amphiphile molecules are characterized by the dual property arising from the interactions between the apolar [alkyl] and the polar part and the surrounding solvent, i.e., water. In assemblies which amphiphiles form in diverse systems, e.g., micelles, soap bubbles, monolayers or bilayers at interfaces, the attractive forces are attributed to the van der Waals forces. It is not easy to estimate the magnitude of van der Waals forces in some of these systems by any direct method.The magnitude of van der Waals forces in spread monolayers of lipids and biopolymers has been reported to be estimated from experimental data. The magnitude of these forces has been estimated by using an equation of state of a very general form, as delineated herein. In the current literature no such attempt has been reported in the analyses of these monolayers spread on aqueous surfaces. These analyses suggest that the predominant surface forces arise from van der Waals interactions, if the magnitude of electrostatic charge repulsions is weak. The equation-of-state as derived indicates that it is useful in providing information about the molecular interaction in monolayers, for both lipids and biopolymers.     

Specific and nonspecific interaction forces between Escherichia coli and silicon nitride, determined by poisson statistical analysis

The nature of the physical interactions between Escherichia coli JM109 and a model surface (silicon nitride) was investigated in water via atomic force microscopy (AFM). AFM force measurements on bacteria can represent the combined effects of van der Waals and electrostatic forces, hydrogen bonding, steric interactions, and perhaps ligand-receptor type bonds. It can be difficult to decouple these forces into their individual components since both specific (chemical or short-range forces such as hydrogen bonding) and nonspecific (long-range colloidal) forces may be present in the overall profiles. An analysis is presented based on the application of Poisson statistics to AFM adhesion data, to decouple the specific and nonspecific interactions. Comparisons with classical DLVO theory and a modified form of a van der Waals expression for rough surfaces were made in order to help explain the nature of the interactions. The only specific forces in the system were due to hydrogen bonding, which from the Poisson analysis were found to be -0.125 nN. The nonspecific forces of 0.155 nN represent an overall repulsive interaction. These nonspecific forces are comparable to the forces calculated from DLVO theory, in which electrostatic-double layer interactions are added to van der Waals attractions calculated at the distance of closest approach, as long as the van der Waals model for "rough" spherical surfaces is used. Calculated electrostatic-double layer and van der Waals interactions summed to 0.116 nN. In contrast, if the classic (i.e., smooth) sphere-sphere model was used to predict the van der Waals forces, the sum of electrostatic and van der Waals forces was -7.11 nN, which appears to be a large overprediction. The Poisson statistical analysis of adhesion forces may be very useful in applications of bacterial adhesion, because it represents an easy way to determine the magnitude of hydrogen bonding in a given system and it allows the fundamental forces to be easily broken into their components.     

Diamagnetic susceptibilities in some linear van der waals complexes using the promolecule model

The second moments and diamagnetic susceptibilities of some linear van der Waals compounds may be calculated by the simple promolecule model utilizing an atomic monopole approximation for the electronic charge distribution. The results are in good agreement with experimental data. The estimated values for a large number of van der Waals systems can aid in interpreting measured Zeeman effects in rotational spectra.     

Theoretical rationale for regioselection in phosphine-catalyzed allenoate additions to acrylates, imines, and aldehydes

[reaction: see text] A rationale for regioselection in phosphine-promoted annulations of acrylates, imines, and aldehydes with allenoates has been developed using computation at the B3LYP/6-31G(d) level of theory. The computed transition states revealed that Lewis acid activation, strong hydrogen bonding (H-bonding), and minimization of unfavorable van der Waals contacts are the guiding factors responsible for regioselection. An excellent level of correlation between the calculated regioselectivities and experiment was observed.     

The electronic spectroscopy and photophysics of tropolone and its van der Waals complexes

Studies of the electronic spectroscopy of tropolone in a variety of media are reviewed. Attempts to understand the effects of the surrounding medium on tropolone in its ground and first excited singlet states by studying the spectra and dynamics of its van der Waals complexes are described. The van der Waals complexes studied to date fall into two groups. Those which are primarily dispersively bound exhibit red microscopic solvent shifts, have observable tunneling doublet splittings and have structures in which the solvent species are bound above and below the plane of the chromophore in the 1∶1 and 1∶2 clusters. Those which are primarily hydrogen-bonded exhibit blue microscopic solvent shifts and exhibit no observable tunneling doublets.     

Collisional energy-transfer processes involving van der waals bonds

Collisional energy transfer to van der Waals complexes is studied via trajectory calculations. Efficient build-up of energy in the van der Waals bond and its subsequent fragmentation is a result of the flow of energy from translation through the chemically bonded molecular unit. Despite such an efficient energy flow, migration of the vibrational energy initially present in the molecular unit into the van der Waals bond is not important. V-V energy transfer between the excited molecular unit and the incident molecule is very inefficient. O₂ is chosen for the model calculations.     

Van der Waals surface graphs and molecular shape

A van der Waals surface graph is the graph defined on a van der Waals surface by the intersections of the atomic van der Waals spheres. A van der Waals shape graph has a vertex for each atom with a visible face on the van der Waals surface, and edges between vertices representing atoms with adjacent faces on the van der Waals surface. These are discrete invariants of three‐dimensional molecular shape. Some basic properties of van der Waals surface graphs are studied, including their relationship with the Voronoi diagram of the atom centres, and a class of molecular embeddings is identified for which the dual of the van der Waals surface graph coincides with the van der Waals shape graph. This revised version was published online in July 2006 with corrections to the Cover Date.     

Hydrogen-bonding versus van der Waals interactions in self-assembled monolayers of substituted isophthalic acids

Self-assembled monolayers of a series of isophthalic acids (5-octadecyloxyisophthalic acid, 5-decyloxyisophthalic acid, 5-hexyloxyisophthalic acid, and 5-pentyloxyisophthalic acid) formed on highly ordered pyrolytic graphite (HOPG) at the solid-liquid interface were studied using scanning tunneling microscopy (STM). Although these molecules have the same dicarboxyl headgroup, their hydrocarbon tails are of different lengths. Hydrogen-bonding between headgroups and van der Waals interactions between the hydrocarbon tails control the final morphology of the monolayer. The STM images show that both van der Waals interactions (vdWs) and hydrogen-bonding (H-B) compete to control the structure, but the final structure of the monolayer is determined by balance between the two interactions.     

乙酰胆碱酯酶AChE与1,7-二氮杂咔唑抑制剂的作用机理的分子动力学模拟

通过分子对接、分子动力学(MD)模拟以及成键自由能分析方法,从原子水平上模拟研究了3种1,7-二氮杂咔唑衍生物(分别记为M1、M2和M3)与ACh E的结合模式及相互作用机理,分析和讨论了研究体系的静电相互作用和范德华相互作用(vd W)。用MM-PBSA方法计算的3种抑制剂与ACh E之间的结合自由能与抑制剂的实验生物活性数据(IC50值)相对应。分析结果表明,残基S286与抑制剂之间形成的氢键作用有利于抑制剂与ACh E之间的结合。范德华相互作用,尤其是抑制剂与关键残基W279和Y334的作用,对抑制剂与ACh E之间的结合自由能有较大的贡献,在区分抑制剂M1(或M2)和M3的生物活性上发挥着重要的作用。     

Nonadditivity in van der Waals interactions within multilayers

Working at the macroscopic continuum level, we investigate effective van der Waals interactions between two layers within a multilayer assembly. By comparing the pair interactions between two layers with effective pair interactions within an assembly we assess the significant consequences of nonadditivity of van der Waals interactions. This allows us to evaluate the best numerical estimate to date for the Hamaker coefficient of van der Waals interactions in lipid-water multilamellar systems.     

Corresponding-states laws for protein solutions

The solvent around protein molecules in solutions is structured and this structuring introduces a repulsion in the intermolecular interaction potential at intermediate separations. We use Monte Carlo simulations with isotropic, pair-additive systems interacting with such potentials. We test if the liquid-liquid and liquid-solid phase lines in model protein solutions can be predicted from universal curves and a pair of experimentally determined parameters, as done for atomic and colloid materials using several laws of corresponding states. As predictors, we test three properties at the critical point for liquid-liquid separation: temperature, as in the original van der Waals law, the second virial coefficient, and a modified second virial coefficient, all paired with the critical volume fraction. We find that the van der Waals law is best obeyed and appears more general than its original formulation: A single universal curve describes all tested nonconformal isotropic pair-additive systems. Published experimental data for the liquid-liquid equilibrium for several proteins at various conditions follow a single van der Waals curve. For the solid-liquid equilibrium, we find that no single system property serves as its predictor. We go beyond corresponding-states correlations and put forth semiempirical laws, which allow prediction of the critical temperature and volume fraction solely based on the range of attraction of the intermolecular interaction potential.     

Enhancement of tunneling due to resonances in pre-barrier wells in chemical reactions

I present a model to describe the effect of resonances in a chemical reaction due to van der Waals wells. The basic premise of the model is that quasibound states of such wells have enhanced tunneling through a reaction barrier due to the lifetime of these states, which leads to multiple “collisions” with the reaction barrier. A simple expression for this enhanced tunneling is presented and shown to qualitatively reproduce the enhanced tunneling that was reported recently for the O(³P) + HCl reaction [J. Chem. Phys. 116 (2002) 7461].     

Ne3-NH3 van der Waals tetramer: rotational spectra and ab initio study of the microsolvation of NH3 with rare gas atoms

Microwave rotational spectra of eleven isotopomers of the Ne(3)-NH(3) van der Waals tetramer were measured using a pulsed jet, Balle-Flygare type Fourier transform microwave spectrometer. The transitions measured fall between 4 and 17 GHz and correspond to the ground internal rotor state of the weakly bound complex. The (20)Ne(3)- and (22)Ne(3)-containing species are symmetric top molecules while the mixed (20)Ne(2)(22)Ne- and (20)Ne(22)Ne(2)-isotopomers are asymmetric tops. For each of the deuterium-containing isotopomers, a tunneling splitting was observed due to the inversion of NH(3) within the tetramer. The (14)N nuclear quadrupole hyperfine structures were resolved and included in the spectroscopic fits of the various isotopomers. The rotational constants obtained from the fits were used to estimate the van der Waals bond lengths of the tetramer while the (14)N nuclear quadrupole coupling contants and the observed inversion tunneling splittings provided information about the internal dynamics of the NH(3) moiety. The experimental results were complemented by the construction of three ab initio potential energy surfaces [CCSD(T)] for the Ne(3)-NH(3) complex, each corresponding to a different internal geometry of NH(3) ( 90 degree angle HNH = 106.67 degrees, 90 degree angle HNH = 113.34 degrees, and 90 degree angle HNH = 120.00 degrees ). The topologies of the surfaces are related to the structures and dynamics of the tetramer. Extensive comparisons are made between the results obtained for the Ne(3)-NH(3) tetramer in this work and previous experimental and ab initio studies of related Rg(n)-NH(3) van der Waals clusters.     

van der Waals interaction between internal aqueous droplets and the external aqueous phase in double emulsions

A mathematical model for analyzing the van der Waals interaction between the internal aqueous droplets (W(1)) and the external aqueous phase (W(2)) of double emulsions has been established. The effects of Hamaker constants of the materials forming the system, especially those of the two different adsorbed surfactant layers with uniform density (A(1) and A(2)), on the van der Waals interaction were investigated. The overall van der Waals interaction across the oil film is a combined result of four individual parts, that is, W(1)-W(2), A(1)-A(2), W(1)-A(1), and A(2)-W(2) van der Waals interaction, and it may be either attractive or repulsive depending on many factors. It was found that the overall van der Waals interaction is dominated by the W(1)-W(2) interaction at large separation distances between the W(1)/O and O/W(2) interfaces, while it is mostly determined by the A(1)-A(2) interaction when the two interfaces are extremely close. Specifically, in the cases when the value of the Hamaker constant of the oil phase is intermediate between those of W(1) and W(2) and there is a thick oil film separating the two interfaces, a weak repulsive overall van der Waals interaction will prevail. If the Hamaker constant of the oil phase is intermediate between those of A(1) and A(2) and the two interfaces are very close, the overall van der Waals interaction will be dominated by the strong repulsive A(1)-A(2) interaction. The repulsive van der Waals interaction at such cases helps stabilize the double emulsions.