Role of the cell-wall structure in the retention of bacteria by microfiltration membranes

This experimental study investigates the retention of bacteria by porous membranes. The transfer of bacteria larger than the nominal pore size of microfiltration track-etched membranes has been studied for several kinds of bacterial strains. This unexpected transfer does not correlate to the hydrophobicity, neither to the surface charge of the microorganism, as suggested in previous reports. We conclude that, in our conditions, the kind of bacteria (Gram-positive or Gram-negative) is finally the most important parameter. As the distinction between those two types of bacteria is related to the cell-wall structure, we provide an experimental evidence, via the action of an antibiotic, that the cell-wall flexibility triggers the transfer of the bacteria through artificial membranes, when the pores are smaller in size than the cell.     

Cell-wall engineering of living bacteria

The cell walls of living bacteria were chemically modified by adding cell-wall precursors. As the precursors to be incorporated into the cell wall, UDP-MurNAc pentapeptide, lipid I, and lipid II derivatives were synthesized. The aimed compounds were attached to the amine residue of lysine at the pentapeptide moiety. Fluorescein-attached UDP-MurNAc pentapeptide was efficiently incorporated into both Gram-positive and Gram-negative bacteria. In the case of Gram-negative bacteria, such as Escherichia coli, the permeability of the outer membrane (lipopolysaccharide layer) was enhanced by EDTA treatment before the incorporation. For Gram-positive bacteria, UDP-MurNAc derivatives were incorporated in the cell wall without EDTA treatment due to the lack of the lipopolysaccharide layer. Furthermore, instead of dyes, a ketone group was attached to the UDP-MurNAc pentapeptide. The ketone group was also delivered to the bacterial cell wall of lactic acid bacteria, giving a platform to attach large molecules on the surface.     

Plant cell-wall cross-links by REDOR NMR spectroscopy

We present a new method that integrates selective biosynthetic labeling and solid-state NMR detection to identify in situ important protein cross-links in plant cell walls. We have labeled soybean cells by growth in media containing l-[ring-d(4)]tyrosine and l-[ring-4-(13)C]tyrosine, compared whole-cell and cell-wall (13)C CPMAS spectra, and examined intact cell walls using (13)C{(2)H} rotational echo double-resonance (REDOR) solid-state NMR. The proximity of (13)C and (2)H labels shows that 25% of the tyrosines in soybean cell walls are part of isodityrosine cross-links between protein chains. We also used (15)N{(13)C} REDOR of intact cell walls labeled by l-[ε-(15)N,6-(13)C]lysine and depleted in natural-abundance (15)N to establish that the side chains of lysine are not significantly involved in covalent cross-links to proteins or sugars.     

Control of endothelial cell adhesion to polymer surface by ion implantation

The bio‐compatibility of ion implanted polymers has been studied by means of in vitro attachment measurements of bovine aorta endothelial cells. The specimens used were polystyrene (PS), polyethylene (PE), polypropylene (PP) and expanded polytetrafluoroethylene (ePTFE). He⁺ and Ne⁺ ion implantation were performed at an energy of 150 keV with fluences between 1 × 10 ¹³ to 1 × 10 ¹⁷ ions/cm ² at room temperature. Wettability was estimated by means of a sessile drop method. The chemical and physical structures of ion implanted polymers were investigated by contact angle measurements, atomic force microscopy and X‐ray photoelectron spectroscopic analysis in relation to cell attachment behavior. The strength of cell attachment on ion implanted specimens at static and under flow conditions was also measured. Ion implanted PP and ePTFE were found to exhibit remarkably higher adhesion and spreading of endothelial cells than non‐implanted specimens. In contrast to these findings, ion implanted PS and PE only demonstrated a little improvement of cell adhesion in this assay. Copyright © 2001 John Wiley & Sons, Ltd.     

Control of the water adhesion on hydrophobic micropillars by spray coating technique

We present an alternative approach for controlling the water adhesion on solid superhydrophobic surfaces by varying their coverage with a spray coating technique. In particular, micro-, submicro-, and nanorough surfaces were developed starting from photolithographically tailored SU-8 micropillars that were used as substrates for spraying first poly(tetrafluoroethylene) submicrometer particles and subsequently iron oxide nanoparticles. The sprayed particles serve to induce surface submicrometer and nanoscale roughness, rendering the SU-8 patterns superhydrophobic (apparent contact angle values of more than 150°), and also to tune the water adhesion between extreme states, turning the surfaces from “non-sticky” to “sticky” while preserving their superhydrophobicity. The influence of the chemical properties and of the geometrical characteristics of the functionalized surfaces on the wetting properties is discussed within the frame of the theory. This simple method can find various applications in the fabrication of microfluidic devices, smart surfaces, and biotechnological and antifouling materials.     

Control of cell adhesion by mechanical reinforcement of soft polyelectrolyte films with nanoparticles

Chemical cross-linking is the standard approach to tune the mechanical properties of polymer coatings for cell culture applications. Here we show that the elastic modulus of highly swollen polyelectrolyte films composed of poly(L-lysine) (PLL) and hyaluronic acid (HA) can be changed by more than 1 order of magnitude by addition of gold nanoparticles (AuNPs) in a one-step procedure. This hydrogel-nanoparticle architecture has great potential as a platform for advanced cell engineering application, for example remote release of drugs. As a first step toward utilization of such films for biomedical applications we identify the most favorable polymer/nanoparticle composition for optimized cell adhesion on the films. Using atomic force microscopy (AFM) we determine the following surface parameters that are relevant for cell adhesion, i.e., stiffness, roughness, and protein interactions. Optimized cell adhesion is observed for films with an elastic modulus of about 1 MPa and a surface roughness on the order of 30 nm. The analysis further shows that AuNPs are not incorporated in the HA/PLL bulk but form clusters on the film surface. Combined studies of the elastic modulus and surface topography indicate a cluster percolation threshold at a critical surface coverage above which the film stiffness drastically increases. In this context we also discuss changes in film thickness, material density and swelling ratio due to nanoparticle treatment.     

Molecular engineering of supramolecular scaffold coatings that can reduce static platelet adhesion

Novel supramolecular coatings that make use of low-molecular weight ditopic monomers with guanine end groups are studied using fluid tapping AFM. These molecules assemble on highly oriented pyrolytic graphite (HOPG) from aqueous solutions to form nanosized banding structures whose sizes can be systematically tuned at the nanoscale by tailoring the molecular structure of the monomers. The nature of the self-assembly in these systems has been studied through a combination of the self-assembly of structural derivatives and molecular modeling. Furthermore, we introduce the concept of using these molecular assemblies as scaffolds to organize functional groups on the surface. As a first demonstration of this concept, scaffold monomers that contain a monomethyl triethyleneglycol branch were used to organize these "functional" units on a HOPG surface. These supramolecular grafted assemblies have been shown to be stable at biologically relevant temperatures and even have the ability to significantly reduce static platelet adhesion.     

Control of adhesion via internally pressurized subsurface microchannels

While pressure sensitive adhesives in general consist of a layer of viscoelastic glue sandwiched between two adherents, we explore here the design of an adhesive embedded with microchannels which remain either open to atmosphere or pressurized to different positive and negative pressures. We subject these layers to indentation by a rigid cylinder such that in addition to adhesion between the indenter and the adhesive surface, the inner walls of the channels too self-adhere; during retraction of the indenter, these surfaces debond, but at a different load, thus resulting in hysteresis. When these channels are pressurized to different extents, the contact areas of various interfaces vary, so also the resultant hysteresis. For experiments with constant depth of indentation, the hysteresis increases and attains maxima at an intermediate value of the internal pressure inside the channels. The hysteresis increases also with the skin thickness of the adhesive over the channels. These results show that subsurface channels in an adhesive allow active manipulation of adhesion over a large range via coupled effect of geometry of channels, their surface characteristics, and the pressure inside.     

Rationally designed ligands as models for bacterial cell-wall recognition by vancomycin-group antibiotics

The ability of vancomycin-group antibiotics to bind cell-wall fragmentsin vitro proyides a model system for semi-quantitative studies of molecular recognition in aqueous solution. Based upon a partitioning of free energy contributions to binding, we have assessed the surface area-dependent free energy contribution of the hydrophobic effect, the free energy contribution of amide-amide and amide-carboxylate hydrogen bonds, and the cost of restricting σ-bond rotations in the binding of both natural cell-wall analogues and within a family of rationally designed cell-wall mimics. The results so far obtained may provide guiding principles for those interested in semi-quantitative studies of molecular recognition and rational drug design. Vancomycin-group antibiotics have been shown to dimerise, a process now proposed to play a functional role in the mechanism of action. Dimerisation has been shown to be cooperatively enhanced by natural cell-wall peptides. However, studies with ristocetin A show that binding of unnatural structural motifs (particularly those containing aromatic ring systems not found in the natural peptides) and dimerisation, are highly anti-cooperative phenomena.     

Control of adhesion and surface forces via potential-dependent adsorption of pyridine

The orientation and extent of adsorption of pyridine on a gold electrode is known to depend on applied potential and is well characterized. By use of the electrochemical surface forces apparatus, we measured the potential dependence of the double-layer interactions and adhesive forces between a gold electrode and a mica surface for different pyridine concentrations. We observed that, unlike mica-mica interactions, the gold-mica interactions were strongly affected by the presence of small concentrations of pyridine. We are able to reach high negative surface potentials (as determined by applying Derjaguin-Landau-Verway-Overbeek theory to our force measurements), which is similar to what is observed in the absence of pyridine. This demonstrates the electronic nature of the forces measured and shows that pyridine does not displace potential-determining ions on the surface. At positive potentials, where the interaction between gold and mica is attractive, pull-off measurements are a strong function of applied potential. The major effect of the presence of pyridine is on the observed shift in the potential of zero force (PZF), moving it to more negative potentials. This effect is caused by the strong dipole of the pyridine molecule. When the applied potential is cast as a deviation from the PZF, the effect of pyridine is to reduce adhesion between gold and mica. We modeled the potential-dependent adhesion of this system using an electrocapillary framework developed previously, and in doing so, we establish the relationship between the gold-liquid and gold-mica surface energies. In addition, we show that pyridine adsorption affects the capacitance of the gold-mica interface.     

Role of solution chemistry and ion valence on the adhesion kinetics of groundwater and marine bacteria

The role of solution chemistry on bacterial adhesion has been investigated using a radial stagnation point flow (RSPF) system. This experimental system utilized an optical microscope and an image-capturing device to directly observe the deposition kinetics of a groundwater bacterium, Burkholderia cepacia G4g, and a marine bacterium, Halomonas pacifica g. Experiments were carried out under well-controlled hydrodynamic and solution chemistry conditions, allowing for the sensitivity of bacterial adhesion behavior to be examined under a range of ionic strength and valence (KCl vs CaCl2) simulating groundwater and marine environments. Complimentary cell characterization techniques were conducted to evaluate the electrophoretic mobility, hydrophobicity, surface charge density, and viability of the bacteria under the same range of conditions. Solution chemistry was found to have a marked effect on the electrokinetic and surface properties of bacteria and the quartz collector, as well as on the resulting rate of bacterial deposition. Comparable adhesion trends were observed for B. cepacia G4g and H. pacifica g. Specifically, the deposition rates of the two bacteria species in both KCl and CaCl2 solutions increased with ionic strength, a trend consistent with traditional Derjaguin-Landau-Verwey-Overbeek (DLVO) theory, which considers the combination of van der Waals and electrostatic double-layer interaction forces. However, in some cases, experimental results showed bacterial deposition behavior to deviate from DLVO predictions. On the basis of the systematic investigation of bacterial cell characteristics, it was found that Ca2+ ions play a distinct role on bacterial surface charge, hydrophobicity, and deposition behaviors. It is further suggested that bacterial adhesion is determined by the combined influence of DLVO interactions, electrosteric interactions associated with solution chemistry, and the hydrodynamics of the deposition system.     

The impact of genetic engineering on the commercial production of antibiotics byStreptomyces and related bacteria

Developments inStreptomyces genetics that have laid a foundation for this field over the past ten years are reviewed and discussed to suggest how this knowledge might useful for improving the commercial production of antibiotics. This brief analysis predicts a bright future for the application ofStreptomyces genetics in antibiotic production.     

Polymer/bacteria composite nanofiber non-wovens by electrospinning of living bacteria protected by hydrogel microparticles

Physically crosslinked PVA-hydrogel microparticles are utilized for encapsulation of E. coli and M. luteus. The bacteria survive dry storage or treatment with bacteria-hostile organic solvents significantly better than unprotected bacteria as proven by culture-test experiments. The bacteria-protecting PVA microparticles are available for standard polymer-solution-processing techniques, as exemplarily shown by co-electrospinning of living bacteria encapsulated in dry PVA-hydrogel microparticles together with PVB-, PLLA-, and PCL-form organic solvents.     

Effects of gamma irradiation on cell-wall constituents of some agricultural residues

The effects of 150 kilogray (kGy) of γ irradiation on cell-wall constituents of cottonwood (CW), lentils straw (LS), apple pruning products (AP) and olive cake (OC) were investigated. Samples were irradiated by γ irradiation at a dose level of 150 kGy under identical conditions of temperature and humidity and analyzed for crude fibre (CF), neutral-detergent fibre (NDF), acid detergent fibre (ADF) and acid-detergent lignin (ADL). The results indicate that γ irradiation decreased CF contents by about 29% for CW, LS and AP and by 17% for OC. NDF values were also decreased by about 4% for CW and OC, and by about 12% for LS and AP. γ Irradiation treatment also decreased ADF values only for CW by 8%. ADL contents decreased by 8% for CW and 5% for OC with no effects for LS and AP. The percentage of cellulose (CL): CF ratio increased by 30, 34, 38 and 20% for CW, LS, AP and OC, respectively. Also, the percentage of hemicellulose (HCL): CF increased by 57% for CW and 16% for OC and decreased by 7% for LS and AP. The percentage of HCL: ADL increased by 22% for CW but decreased by 33% for LS and AP with no changes for OC. There were no changes in CL: ADL ratio for all residues.     

Inflammatory mimetic microfluidic chip by immobilization of cell adhesion molecules for T cell adhesion

Leukocyte adhesion to adhesion molecules on endothelial cells is important in immune function, cancer metastasis and inflammation. This cell-cell binding is mediated via cell adhesion molecules such as E-selectin, intercellular adhesion molecule-1 (ICAM-1) and vascular cell adhesion molecule-1 (VCAM-1) found on endothelial cells. Because these adhesion molecules on endothelial cells vary significantly across several disease conditions such as autoimmune diseases, inflammation or cancer metastasis, investigations of therapeutic agents that down-regulate leukocyte-endothelial interactions have been based on in vitro models using endothelial cell lines. Here we report a new model, an inflammatory mimetic microfluidic chip, which emulates leukocyte binding to cell adhesion molecules (CAM) by controlling the types and ratio of adhesion molecules. In our model, E-selectin was essential for the synergic binding of Jurkat T cells. Immunosuppressive drugs, such as tacrolimus (FK506) and cyclosporine A (CsA), were used to inhibit T cell interactions under the physiologic model of T cell migration at a ratio of 5?:?4.3?:?3.9 (E-selectin?:?ICAM-1?:?VCAM-1). Our results support the potential usefulness of the inflammatory mimetic microfluidic chip as a T cell adhesion assay tool with modified adhesion molecules for applications such as immunosuppressive drug screening. The inflammatory mimetic microfluidic chip can also be used as a biosensor in clinical diagnostics, drug efficacy tests and high throughput drug screening due to the dynamic monitoring capability of the microfluidic chip.     

Separation of bacteria by capillary electrophoresis

Differences in the surface charges of bacteria can be exploited for their separation by capillary electrophoresis. Because of their low electrophoretic mobility, the separation is not always easy to perform, especially in the presence of the electroosmotic flow. Elimination of electroosmotic flow by capillary wall modification with γ‐(trimethoxysilyl)propyl methacrylate followed by acrylamide bonding permits separation over a distance of 8.5 cm.     

Accumulation of 2,2-difluoroethanol by bacteria

2,2-Difluoroethanol was accumulated by bacteria, giving difluoroacetic acid and so on. The conversion of 2,2,-difluoroethanol to difluoroacetic acid is unusual in a biological system.     

Gas-phase noncovalent interactions between vancomycin-group antibiotics and bacterial cell-wall precursor peptides probed by hydrogen/deuterium exchange

Gas-phase structures of noncovalent complexes between the glycopeptide antibiotics vancomycin, eremomycin, ristocetin, and pseudo aglyco-ristocetin and the cell-wall mimicking peptides N-acetyl-D-Alanyl-D-Alanine, N-acetyl-Glycyl-D-Alanine, and N,N′-di-acetyl L-Lysyl-D-Alanyl-D-Alanine have been probed by hydrogen/deuterium (H/D) exchange using ND₃ as reagent gas. The noncovalent complexes were transferred from solution to the vacuum using electrospray ionization. The H/D exchange of the solvent-free ions was studied in a Fourier transform ion cyclotron resonance mass spectrometer. The H/D exchange behavior of the free antibiotics and the free peptides were compared with the exchange observed for the antibiotic–peptide complexes. A general increase was found in the degree of deuterium incorporation upon complex formation with the ligand, which indicates that the peptide binding makes more sites on the antibiotic capable of taking part in the H/D exchange. Apart from H/D exchange, adduct formation with ND₃ was observed, but only for the singly protonated peptides and the doubly protonated [ristocetin+N-acetyl-D-Alanyl-D-Alanine]. This marked difference in chemical reactivity of closely related systems such as [ristocetin+N-acetyl-Glycyl-D-Alanine] and [ristocetin+N-acetyl-D-Alanyl-D-Alanine] indicates that the gas-phase structures of these noncovalent complexes are quite sensitive to small changes in the primary structures of the peptides. The gas-phase structures of the antibiotic–peptide complexes are probably different from the solution-phase structures, with the peptides no longer bound to the characteristic solution-phase binding pockets of the antibiotics.     

Production of polyhydroxyalkanoates by fermentation of bacteria

Polyhydroxyalkanoates (PHAs) are carbon and energy reserve material accumulated by numerous microorganisms and have been drawing much attention as biodegradable substitutes for conventional nondegradable plastics and elastomers. There are a number of different PHAs having a variety of material properties based on the different monomer composition. Poly(3‐hydroxybutyrate) and poly(3‐hydroxybutyrate‐co‐3‐hydroxyvalerate) are now efficiently produced by bacterial fermentation at reasonable production costs. Recent advances in the production of short‐chain‐length (SCL) PHAs by bacterial fermentation are reviewed. Current status of the production of medium‐chain‐length (MCL) PHAs and SCL‐MCL‐PHA copolymers is also reviewed.