Performance of the M11-L density functional for bandgaps and lattice constants of unary and binary semiconductors

The recently developed SOGGA11 and M11-L density functionals have been tested for the prediction of bandgaps and lattice constants by comparing to databases containing 31 bandgaps and 34 lattice constants. To make a comparative assessment we also test several other density functionals against the same databases; in particular, we test the local spin density approximation, PBE, PBEsol, SOGGA, TPSS, revTPSS, and M06-L local density functionals and the HSE screened-exchange hybrid nonlocal density functional; and for a subset of 13 lattice constants we also compare the mean errors to those of the AM05 and WC local density functionals and the HISS and HSEsol nonlocal density functionals. The tests show that, of the ten functionals tested against all 65 data, the SOGGA, PBEsol, and HSE functionals are the most accurate for lattice constants, whereas the HSE, M11-L, and M06-L density functionals are the most accurate for bandgaps. However, the SOGGA11 density functional is the most accurate generalized gradient approximation for bandgaps.     

Construction of a generalized gradient approximation by restoring the density-gradient expansion and enforcing a tight Lieb-Oxford bound

Recently, a generalized gradient approximation (GGA) to the density functional, called PBEsol, was optimized (one parameter) against the jellium-surface exchange-correlation energies, and this, in conjunction with changing another parameter to restore the first-principles gradient expansion for exchange, was sufficient to yield accurate lattice constants of solids. Here, we construct a new GGA that has no empirical parameters, that satisfies one more exact constraint than PBEsol, and that performs 20% better for the lattice constants of 18 previously studied solids, although it does not improve on PBEsol for molecular atomization energies (a property that neither functional was designed for). The new GGA is exact through second order, and it is called the second-order generalized gradient approximation (SOGGA). The SOGGA functional also differs from other GGAs in that it enforces a tighter Lieb-Oxford bound. SOGGA and other functionals are compared to a diverse set of lattice constants, bond distances, and energetic quantities for solids and molecules (this includes the first test of the M06-L meta-GGA for solid-state properties). We find that classifying density functionals in terms of the magnitude mu of the second-order coefficient of the density gradient expansion of the exchange functional not only correlates their behavior for predicting lattice constants of solids versus their behavior for predicting small-molecule atomization energies, as pointed out by Perdew and co-workers [Phys. Rev. Lett. 100, 134606 (2008); Perdew ibid. 80, 891 (1998)], but also correlates their behavior for cohesive energies of solids, reaction barriers heights, and nonhydrogenic bond distances in small molecules.     

How reliable is DFT in predicting relative energies of polycyclic aromatic hydrocarbon isomers? comparison of functionals from different rungs of jacob's ladder

Density functional theory (DFT) is the only quantum‐chemical avenue for calculating thermochemical/kinetic properties of large polycyclic aromatic hydrocarbons (PAHs) such as graphene nanoflakes. Using CCSD(T)/CBS PAH isomerization energies, we find that all generalized gradient approximation (GGA) and meta GGA DFT functionals have severe difficulties in describing isomerization energies in PAHs. The poor performance of these functionals is demonstrated by the following root‐mean‐square deviations (RMSDs) obtained for a database of C₁₄H₁₀ and C₁₈H₁₂ isomerization energies. The RMSDs for the GGAs range between 6.0 (BP86‐D3) and 23.0 (SOGGA11) and for the meta GGAs they range between 3.5 (MN12‐L) and 11.9 (τ‐HCTH) kJ mol⁻¹. These functionals (including the dispersion‐corrected methods) systematically and significantly underestimate the isomerization energies. A consequence of this behavior is that they all predict that chrysene (rather than triphenylene) is the most stable C₁₈H₁₂ isomer. A general improvement in performance is observed along the rungs of Jacob's Ladder; however, only a handful of functionals from rung four give good performance for PAH isomerization energies. These include functionals with high percentages (40–50%) of exact Hartree–Fock exchange such as the hybrid GGA SOGGA11‐X (RMSD = 1.7 kJ mol⁻¹) and the hybrid‐meta GGA BMK (RMSD = 1.3 kJ mol⁻¹). Alternatively, the inclusion of lower percentages (20–30%) of exact exchange in conjunction with an empirical dispersion correction results in good performance. For example, the hybrid GGA PBE0‐D3 attains an RMSD of 1.5 kJ mol⁻¹, and the hybrid‐meta GGAs PW6B95‐D3 and B1B95‐D3 result in RMSDs below 1 kJ mol⁻¹. © 2016 Wiley Periodicals, Inc.     

A theoretical description of charge reorganization energies in molecular organic P‐type semiconductors

Charge transport properties of materials composed of small organic molecules are important for numerous optoelectronic applications. A material's ability to transport charges is considerably influenced by the charge reorganization energies of the composing molecules. Hence, predictions about charge‐transport properties of organic materials deserve reliable statements about these charge reorganization energies. However, using density functional theory which is mostly used for the predictions, the computed reorganization energies depend strongly on the chosen functional. To gain insight, a benchmark of various density functionals for the accurate calculation of charge reorganization energies is presented. A correlation between the charge reorganization energies and the ionization potentials is found which suggests applying IP‐tuning to obtain reliable values for charge reorganization energies. According to benchmark investigations with IP‐EOM‐CCSD single‐point calculations, the tuned functionals provide indeed more reliable charge reorganization energies. Among the standard functionals, ωB97X‐D and SOGGA11X yield accurate charge reorganization energies in comparison with IP‐EOM‐CCSD values. © 2016 Wiley Periodicals, Inc.     

Benchmark ab initio proton affinity and gas-phase basicity of α-alanine based on coupled-cluster theory and statistical mechanics

We determine the proton affinity (PA) and gas-phase basicity (GB) of amino acid α-alanine at a chemically accurate level by performing explicitly-correlated CCSD(T)-F12b/aug-cc-pVDZ geometry optimizations and normal mode vibrational frequency calculations as well as CCSD(T)-F12b/aug-cc-pVTZ energy computations at the possible neutral and protonated geometries. Temperature effects at 298.15 K considering translational, rotational, and vibrational enthalpy and entropy corrections are obtained via standard statistical mechanics utilizing the molecular geometries and the harmonic vibrational energy levels. Both the amino nitrogen (N) and the carbonyl oxygen (O) atoms are proven to be potential protonation sites and a systematic conformational search reveals 3 N- and 9 O-protonated conformers in the 0.00–7.88 and 25.43–30.43 kcal/mol energy ranges at 0 K, respectively. The final computed PA and GB values at (0)298.15 K in case of N-protonation are (214.47)216.80 and 207.07 kcal/mol, respectively, whereas the corresponding values for O-protonation are (189.04)190.63 and 182.31 kcal/mol. The results of the benchmark high-level coupled-cluster computations are utilized to assess the accuracy of several lower-level cost-effective methods such as MP2 and density functional theory with various functionals (SOGGA11-X, M06-2X, PBE0, B3LYP, M06, TPSS).     

Theoretical assessment of the elastic constants and hydrogen storage capacity of some metal-organic framework materials

Metal-organic frameworks (MOFs) are promising materials for applications such as separation, catalysis, and gas storage. A key indicator of their structural stability is the shear modulus. By density functional theory calculations in a 106-atom supercell, under the local density approximation, we find c(11)=29.2 GPa and c(12)=13.1 GPa for Zn-based MOF 5. However, we find c(44) of MOF-5 to be exceedingly small, only 1.4 GPa at T=0 K. The binding energy E(ads) of a single hydrogen molecule in MOF-5 is evaluated using the same setup. We find it to be -0.069 to -0.086 eVH(2) near the benzene linker and -0.106 to -0.160 eVH(2) near the Zn(4)O tetrahedra. Substitutions of chlorine and hydroxyl in the benzene linker have negligible effect on the physisorption energies. Pentacoordinated copper (and aluminum) in a framework structure similar to MOF-2 gives E(ads) approximately -0.291 eVH(2) (and -0.230 eVH(2)), and substitution of nitrogen in benzene (pyrazine) further enhances E(ads) near the organic linker to -0.16 eVH(2), according to density functional theory with local density approximation.     

Adiabatic approximation of time-dependent density matrix functional response theory

Time-dependent density matrix functional theory can be formulated in terms of coupled-perturbed response equations, in which a coupling matrix K(omega) features, analogous to the well-known time-dependent density functional theory (TDDFT) case. An adiabatic approximation is needed to solve these equations, but the adiabatic approximation is much more critical since there is not a good "zero order" as in TDDFT, in which the virtual-occupied Kohn-Sham orbital energy differences serve this purpose. We discuss a simple approximation proposed earlier which uses only results from static calculations, called the static approximation (SA), and show that it is deficient, since it leads to zero response of the natural orbital occupation numbers. This leads to wrong behavior in the omega-->0 limit. An improved adiabatic approximation (AA) is formulated. The two-electron system affords a derivation of exact coupled-perturbed equations for the density matrix response, permitting analytical comparison of the adiabatic approximation with the exact equations. For the two-electron system also, the exact density matrix functional (2-matrix in terms of 1-matrix) is known, enabling testing of the static and adiabatic approximations unobscured by approximations in the functional. The two-electron HeH(+) molecule shows that at the equilibrium distance, SA consistently underestimates the frequency-dependent polarizability alpha(omega), the adiabatic TDDFT overestimates alpha(omega), while AA improves upon SA and, indeed, AA produces the correct alpha(0). For stretched HeH(+), adiabatic density matrix functional theory corrects the too low first excitation energy and overpolarization of adiabatic TDDFT methods and exhibits excellent agreement with high-quality CCSD ("exact") results over a large omega range.     

Short-range exchange and correlation energy density functionals: beyond the local-density approximation

We propose approximations which go beyond the local-density approximation for the short-range exchange and correlation density functionals appearing in a multideterminantal extension of the Kohn-Sham scheme. A first approximation consists of defining locally the range of the interaction in the correlation functional. Another approximation, more conventional, is based on a gradient expansion of the short-range exchange-correlation functional. Finally, we also test a short-range generalized-gradient approximation by extending the Perdew-Burke-Ernzerhof exchange-correlation functional to short-range interactions.     

Characterization of the high-pressure structural transition and thermodynamic properties in sodium chloride: a computational investigation on the basis of the density functional theory

Using first-principles calculations, the elastic constants, the thermodynamic properties, and the structural phase transition between the B1 (rocksalt) and the B2 (cesium chloride) phases of NaCl are investigated by means of the pseudopotential plane-waves method. The calculations are performed within the generalized gradient approximation to density functional theory with the Perdew-Burke-Ernzerhof exchange-correlation functional. On the basis of the third-order Birch-Murnaghan equation of states, the transition pressure Pt between the B1 phase and the B2 phase of NaCl is determined. The calculated values are generally speaking in good agreement with experiments and with similar theoretical calculations. From the theoretical calculations, the shear modulus, Young's modulus, rigidity modulus, and Poisson's ratio of NaCl are derived. According to the quasi-harmonic Debye model, we estimated the Debye temperature of NaCl from the average sound velocity. Moreover, the pressure derivatives of elastic constants, partial differentialC11/partial differentialP, partial differentialC12/partial differentialP, partial differentialC44/partial differentialP, partial differentialS11/partial differential P, partial differentialS12/partial differentialP, and partial differentialS44/partial differentialP, for NaCl crystal are investigated for the first time. This is a quantitative theoretical prediction of the elastic and thermodynamic properties of NaCl, and it still awaits experimental confirmation.     

Current-dependent extension of the Perdew-Burke-Ernzerhof exchange-correlation functional

The probability current density is used in addition to the electron density and its gradient as a variable in the construction of an exchange-correlation functional. Starting from the Perdew-Burke-Ernzerhof generalized gradient approximation, we employ exact conditions to build a nonempirical exchange functional. Matching the correlation functional to that for exchange yields a current-dependent approximation for correlation. The resulting functional is given in a simple closed form. Application of this approximation to open shell atoms eliminates the artificial level splitting of formally degenerate states observed with generalized gradient approximations.     

Local-density approximation for orbital densities applied to the self-interaction correction

A simple approximation to the functional derivative of Perdew-Zunger-type self-interaction-corrected local-spin density functional is suggested. In this approach, the orbital density |phi(isigma)(r)|(2) is regarded as a functional of the local electron density |phi(isigma)(r)|(2)=n(isigma)(n(sigma)(r)) so as to enable a functional derivative of n(isigma)(n(sigma)(r)) with respect to n(sigma)(r). Our computational results show that this approximation gives fairly good estimates of the total energy, the ionization potential, and the electron affinity for atoms. Comparative studies of this method with the averaged-density approximation and the global averaging method for the self-interaction correction are made.     

Calculation of indirect nuclear spin-spin coupling constants within the regular approximation for relativistic effects

A new method for calculating the indirect nuclear spin-spin coupling constant within the regular approximation to the exact relativistic Hamiltonian is presented. The method is completely analytic in the sense that it does not employ numeric integration for the evaluation of relativistic corrections to the molecular Hamiltonian. It can be applied at the level of conventional wave function theory or density functional theory. In the latter case, both pure and hybrid density functionals can be used for the calculation of the quasirelativistic spin-spin coupling constants. The new method is used in connection with the infinite-order regular approximation with modified metric (IORAmm) to calculate the spin-spin coupling constants for molecules containing heavy elements. The importance of including exact exchange into the density functional calculations is demonstrated.     

Phase behavior of ionic fluids in slitlike pores: a density functional approach for the restricted primitive model

We present a density functional theory of nonuniform ionic fluids. This theory is based on the application of the electrostatic contribution to the free energy functional arising from mean spherical approximation for a bulk restricted primitive model and from the energy route bulk equation of state. In order to employ this functional we define a reference fluid and additional averaged densities, according to the approach introduced by Gillespie, Nonner and Eisenberg [J. Phys.: Condens. Matter 14, 12129 (2002)]. In the case of bulk systems the proposed theory reduces to the mean spherical approximation equation of state, arising from the energy route and thus it predicts the first-order phase transition. We use this theory to investigate the effects of confinement on the liquid-vapor equilibria. Two cases are considered, namely an electrolyte confined to the pore with uncharged walls and with charged walls. The dependence of the capillary evaporation diagrams on the pore width and on the electrostatic potential is determined.     

Connection between the regular approximation and the normalized elimination of the small component in relativistic quantum theory

The regular approximation to the normalized elimination of the small component (NESC) in the modified Dirac equation has been developed and presented in matrix form. The matrix form of the infinite-order regular approximation (IORA) expressions, obtained in [Filatov and Cremer, J. Chem. Phys. 118, 6741 (2003)] using the resolution of the identity, is the exact matrix representation and corresponds to the zeroth-order regular approximation to NESC (NESC-ZORA). Because IORA (=NESC-ZORA) is a variationally stable method, it was used as a suitable starting point for the development of the second-order regular approximation to NESC (NESC-SORA). As shown for hydrogenlike ions, NESC-SORA energies are closer to the exact Dirac energies than the energies from the fifth-order Douglas-Kroll approximation, which is much more computationally demanding than NESC-SORA. For the application of IORA (=NESC-ZORA) and NESC-SORA to many-electron systems, the number of the two-electron integrals that need to be evaluated (identical to the number of the two-electron integrals of a full Dirac-Hartree-Fock calculation) was drastically reduced by using the resolution of the identity technique. An approximation was derived, which requires only the two-electron integrals of a nonrelativistic calculation. The accuracy of this approach was demonstrated for heliumlike ions. The total energy based on the approximate integrals deviates from the energy calculated with the exact integrals by less than 5 x 10(-9) hartree units. NESC-ZORA and NESC-SORA can easily be implemented in any nonrelativistic quantum chemical program. Their application is comparable in cost with that of nonrelativistic methods. The methods can be run with density functional theory and any wave function method. NESC-SORA has the advantage that it does not imply a picture change.     

Random-phase-approximation-based correlation energy functionals: benchmark results for atoms

The random phase approximation for the correlation energy functional of the density functional theory has recently attracted renewed interest. Formulated in terms of the Kohn-Sham orbitals and eigenvalues, it promises to resolve some of the fundamental limitations of the local density and generalized gradient approximations, as, for instance, their inability to account for dispersion forces. First results for atoms, however, indicate that the random phase approximation overestimates correlation effects as much as the orbital-dependent functional obtained by a second order perturbation expansion on the basis of the Kohn-Sham Hamiltonian. In this contribution, three simple extensions of the random phase approximation are examined; (a) its augmentation by a local density approximation for short-range correlation, (b) its combination with the second order exchange term, and (c) its combination with a partial resummation of the perturbation series including the second order exchange. It is found that the ground state and correlation energies as well as the ionization potentials resulting from the extensions (a) and (c) for closed subshell atoms are clearly superior to those obtained with the unmodified random phase approximation. Quite some effort is made to ensure highly converged data, so that the results may serve as benchmark data. The numerical techniques developed in this context, in particular, for the inherent frequency integration, should also be useful for applications of random phase approximation-type functionals to more complex systems.     

Reactivity indicators for degenerate states in the density-functional theoretic chemical reactivity theory

Density-functional-theory-based chemical reactivity indicators are formulated for degenerate and near-degenerate ground states. For degenerate states, the functional derivatives of the energy with respect to the external potential do not exist, and must be replaced by the weaker concept of functional variation. The resultant reactivity indicators depend on the specific perturbation. Because it is sometimes impractical to compute reactivity indicators for a specific perturbation, we consider two special cases: point-charge perturbations and Dirac delta function perturbations. The Dirac delta function perturbations provide upper bounds on the chemical reactivity. Reactivity indicators using the common used "average of degenerate states approximation" for degenerate states provide a lower bound on the chemical reactivity. Unfortunately, this lower bound is often extremely weak. Approximate formulas for the reactivity indicators within the frontier-molecular-orbital approximation and special cases (two or three degenerate spatial orbitals) are presented in the supplementary material. One remarkable feature that arises in the frontier molecular orbital approximation, and presumably also in the exact theory, is that removing electrons sometimes causes the electron density to increase at the location of a negative (attractive) Dirac delta function perturbation. That is, the energetic response to a reduction in the external potential can increase even when the number of electrons decreases.     

Level-Set Variational Implicit-Solvent Modeling of Biomolecules with the Coulomb-Field Approximation

Central in the variational implicit-solvent model (VISM) [Dzubiella, Swanson, and McCammon Phys. Rev. Lett.2006, 96, 087802 and J. Chem. Phys.2006, 124, 084905] of molecular solvation is a mean-field free-energy functional of all possible solute-solvent interfaces or dielectric boundaries. Such a functional can be minimized numerically by a level-set method to determine stable equilibrium conformations and solvation free energies. Applications to nonpolar systems have shown that the level-set VISM is efficient and leads to qualitatively and often quantitatively correct results. In particular, it is capable of capturing capillary evaporation in hydrophobic confinement and corresponding multiple equilibrium states as found in molecular dynamics (MD) simulations. In this work, we introduce into the VISM the Coulomb-field approximation of the electrostatic free energy. Such an approximation is a volume integral over an arbitrary shaped solvent region, requiring no solutions to any partial differential equations. With this approximation, we obtain the effective boundary force and use it as the "normal velocity" in the level-set relaxation. We test the new approach by calculating solvation free energies and potentials of mean force for small and large molecules, including the two-domain protein BphC. Our results reveal the importance of coupling polar and nonpolar interactions in the underlying molecular systems. In particular, dehydration near the domain interface of BphC subunits is found to be highly sensitive to local electrostatic potentials as seen in previous MD simulations. This is a first step toward capturing the complex protein dehydration process by an implicit-solvent approach.     

修正的格子空间的密度泛函理论在狭缝中的应用

对描述单原子分子溶液在狭缝中的吸附现象的格子空间的密度泛函理论 (LDFT, lattice density functional theory)进行了修正, 在系统Helmholtz函数的推导中引入了平均场近似校正和Gibbs-Helmholtz方程. 对比Monte Carlo (MC)模拟结果, 发现LDFT理论对吸附分子在狭缝中的吸附浓度分布的预测与模拟数据有较大的偏差, 而修正模型的结果与模拟数据吻合较好 .随着体相浓度的变化,分子在狭缝中具有多级吸附行为, 具体表现为在特定体相浓度区, 对相同的体相浓度,狭缝中同时存在不同的分子浓度分布, 而在Gibbs等温线上可以明显看出多级吸附的性质. 对比修正前后的结果发现,两者均可以预测多级吸附行为, 但仍存在着较大的差异.