Molecular-beam study of the water-helium system: features of the isotropic component of the intermolecular interaction and a critical test for the available potential-energy surfaces

We report molecular-beam measurements of the total integral cross sections for the scattering of water molecules by helium atoms. A combined analysis of the new experimental data together with available differential cross section results has allowed an accurate determination of the isotropic component of the interaction potential for this prototypical system. The potential well shows a depth of 0.265 +/- 0.010 kJ/mol at a distance between He and the center of mass of the water molecule of 0.345 +/- 0.02 nm. An effective isotropic long-range attraction constant C(LR) = (6.3+/-0.3) x 10(-4) kJ mol(-1) nm(-6), including both dispersion and induction contributions, has also been determined. The most recent and accurate ab initio potential-energy surfaces have been tested against these new experimental results.     

Charge-displacement analysis of the interaction in the ammonia-noble gas complexes

We carry out an accurate ab initio study of the interaction between ammonia and the whole series of noble gas atoms and relate the results to those of high-resolution scattering experiments that provide access to the average radial dependence of the interaction potential. The charge-displacement calculations show that charge transfer is a non-negligible, strongly anisotropic, component of the interaction, governing some basic features of the potential energy surfaces especially for the heavier systems. A comparison is made with the analogous binary complexes of H(2)O with the water-H(2) system (Belpassi, L.; et al. J. Am. Chem. Soc.2010, 132, 13046), supporting the conclusion that charge transfer plays a peculiarly special role in water's intermolecular interactions.     

Arrangement and nature of intermolecular hydrogen bonding in complex biomolecular systems: modeling the vitamin C---L-alanine interaction

Vitamin C is known as an essential dietary supplement and implicated in diverse biological processes. We present here a theoretical study on the nature of hydrogen bonding of vitamin C in biological systems. For this reason, the complexes of vitamin C (VC) with neutral and zwitterionic L-alanine (as the simplest chiral amino acid) were studied at the MP2/6-311++G(d,p) level of theory. In the gas phase, neutral L-alanine leads to more stable complexes than the zwitterionic forms while the reverse is true in the aqueous phase. The complexes are formed via two hydrogen bond interactions, which result in a ring-like hydrogen-bonded networks. The nature of H-bonds was characterized in terms of natural bond orbital and quantum theory of atoms in molecule analyses (QTAIM). The H-bonds in the studied complexes were electrostatic in nature; however, in the case of shorter and directional H-bonds and ionic interactions, contributions of covalent character were also non-negligible. Natural energy decomposition analysis of hydrogen-bonded complexes reveals that the charge transfer and electrical components are the largest contributors for the interaction energies of complexes. Natural resonance theory analysis suggests higher resonance weight for charge-assisted interactions of vitamin C---alanine (zwitterionic) complexes, where the total interaction energy is considerably higher than that of neutral alanine.     

A study into the possible homoaromatic nature of some related carbene and cationic intermediates with the potential for transannular interaction

A comparison of the aromatic nature of the cations and carbenes centered at the 8-position of tricyclo[3.2.1.0(2,4)]octane, the 9-position of pentacyclo[4.3.0.0(2,4).0(3,8).0(5,7)]nonane, the 6-position of tricyclo[3.1.1.0(2,4)]heptane, and the 4-position of tetracyclo[3.3.0.0(2,8).0(3,6)]octane has been undertaken. Hybrid density functional theory calculations have been used to examine the geometric, energetic, and magnetic characteristics of each cation, singlet carbene, and triplet carbene. The results shed light on the flexibility of the polycycles to achieve stable intermediates and on the breadth of homoaromaticity.     

A comparative study of intermolecular potential energy functions proposed for the rare gas dimers

The vibration-rotation energy level spacings of homo- and heteronuclear rare gas dimers are calculated for some more common analytical intermolecular potential energy functions in a unified way by employing the discrete variable representation (DVR) method.     

Investigating the nature of intermolecular and intramolecular bonds in noble gas containing molecules

This article presents a theoretical study on a number of selected noble gas containing systems of the general formula FNgR and NgR (Ng = He, Ne, Ar, Kr, Xe and R = CH₃, CN, CCH, BO, BNH, H, BeO, and AuF). The principal structures, bond energies, spectroscopic, and electronic properties of 28 noble gas containing molecules were investigated using density functional theory at the BMK level. Quantum theory of atoms in molecules, natural bond orbital, and several other analysis methods have been used to provide more insight into the nature of noble gas bonds. Although both F? Ng and Ng? R bonds in the investigated molecules are assigned to have partially covalent and partially electrostatic nature, the covalent character is dominant in Ng? R bonds. In the second part, the intermolecular interactions between FNgR molecules and hydrogen fluoride are overviewed with emphasis on the hydrogen bonding through the fluorine side of noble gas molecule with hydrogen of HF. The calculated interaction energies were found to decrease in magnitude going down the noble gas series. For all noble gases, the strongest hydrogen bond has been observed in the case R=CH₃. On the contrary, using R=CN in the FNgR moiety weakens the interaction strength. © 2014 Wiley Periodicals, Inc.     

Cluster-molecule systems: Analysis and tuning of the interaction potential

The interaction (modelled by a LEPS potential) of a D₂ molecule with an icosahedral Ni₁₃ cluster is mapped and analyzed in the form of equipotential contour plots. The topological features of the map correlate with the energetic and dynamical characteristics of the dissociative adsorption of the molecule on the cluster, which were extracted from quasiclassical trajectory simulations. A modification of the LEPS potential used originally is introduced. It brings the calculated reactivity of the cluster into agreement with the experimental data.     

Energetic study of bromobenzonitrile isomers: insights on the intermolecular interactions, aromaticity and electronegativity

The standard (p ^o = 0.1 MPa) molar enthalpies of formation, in the gaseous phase, of 2-, 3- and 4-bromobenzonitrile isomers were calculated from the combination of the following two parameters experimentally determined: the standard molar enthalpy of formation in the condensed phase, derived from the standard molar energy of combustion in oxygen at T = 298.15 K, measured by rotating-bomb combustion calorimetry, and the standard molar enthalpy of sublimation at the same reference temperature, derived from vapour pressure studies at several temperatures, as measured by mass-loss Knudsen effusion. The computational calculations complement the energetic study and analysis of the electron delocalization allows a comparison between the fluorine and bromine benzonitrile isomers. The harmonic oscillator model of aromaticity and nucleus-independent chemical shift aromaticity criteria and the natural bond orbital analysis were applied and related with the intramolecular enthalpic interactions. The intermolecular interactions in the crystal packing were analysed in terms of enthalpic and entropic contributions, using the crystallographic structures available in literature.     

Determining the parameters of the potential of intermolecular interaction by the Zeno line

The method of determination of intermolecular interaction potential parameters by the Zeno line is proposed. The intermolecular interaction of ethane, propane, ethylene, and propylene is described using a model of site-site interactions and Karr-Konowalow potential. It is shown that the parameters of intermolecular interaction for this potential can be determined from a small number of experimental data in the single-phase area. It is noted that the final parameters allow us to describe the thermodynamic properties over a broad range of gas and liquid states with precision acceptable for practical use.     

Theoretical study on intermolecular interaction of epoxyethane dimer

Ab initio calculations at Hartree–Fock and fourth‐order Mø ller–Plesset (MP4) correlation correction levels with 6‐31G* basis set have been performed on the epoxyethane dimer. Dimer binding energies have been corrected for the basis set superposition error (BSSE) and the zero‐point energy. The greatest corrected dimer binding energy is −8.36 kJ/mol at the MP4/6‐31G*//HF/6‐31G* level. The natural bond orbital analysis has been performed to trace the origin of the weak interactions that stabilize dimer. © 2000 John Wiley & Sons, Inc. Int J Quant Chem 78: 94–98, 2000     

硝酸乙酯分子间相互作用的ab initio研究

在abinitio-HF/6-31G水平上求得硝酸乙酯二聚体势能面上的四种优化构型和电子结构。经MP2电子相关校正和基组叠加误差(BSSE)以及零点能(ZPE)校正，求得二聚体的最大结合能为11.46kJ.mol^-^1，还进行HF/6-311G和HF/6-311++G水平的总能量比较计算，发现6-31G基组对计算结合能比较适合，二子体系间的电荷转移很少，对优化构型进行振动分析，并基于统计热力学求得从单体形成二聚体的热力学性质变化。     

A theoretical study on the intermolecular interaction of energetic system-Nitromethane dimer

Three optimized geometries of nitromethane dimer have been obtained at the HF/6-31G level.Dimer binding energies have been corrected for the basis set superposition error (BSSE) and the zero point energy.Computed results indicate that the cyclic structure of (CH3NO2)2 is the most stable of three optimized geometries,whose corrected binding energyis 17.29 kJ mol-1 at the MP4SDTQ/6-31G//HF/6-31G level.In the optimized structures of nitromethane dimer,the inter-molecular hydrogen bond has not been found; and the charge-transfer interaction between CH3NO2 subsystems is weak; and the correlation interaction energy makes a little contribution to the intermolecular interaction energy of the dimer.     

Theoretical study of intermolecular potential energy surface for HCl dimer: Example of nonspherical atom–atom exchange repulsion interaction

The intermolecular part of the potential energy surface for the HCl dimer has been studied with ab initio quantum chemical methods. An intermolecular potential, based on quantum chemical calculations has been constructed. The interaction energy consists of electrostatic, induction, and dispersion terms calculated from the monomer properties of the interacting molecules and an exchange repulsion term. The latter term was parameterized from the results of the quantum chemical calculations and estimates of the electrostatic and induction energies. It was found necessary to use nonspherical atom–atom exchange repulsion interaction parameters, and the parameters describing the deviation from spherical behavior could be obtained from the expectation values of r² for the electrons assigned to an atom. © 1998 John Wiley & Sons, Inc. J Comput Chem 19: 1816–1825, 1998     

New insights into the interaction of hydrogen atoms with boron-substituted carbon

Boron substitution in carbon materials has been comprehensively investigated using the density functional theory method. It was found that there is a correlation between the stability of the graphene sheet, the distribution of pi electrons, the electrostatic potential, and the capability for hydrogen-atom adsorption. Boron substitution destabilizes the graphene structure, increases the density of the electron wave around the substitutional boron atoms, and lowers the electrostatic potential, thus improving the hydrogen adsorption energy on carbon. However, this improvement is only ca. 10-20% instead of a factor of 4 or 5. Our calculations also show that two substitutional boron atoms provide consistent and reliable results, but one substitutional boron results in contradictory conclusions. This is a warning to other computational chemists who work on boron substitution that the conclusion from one substitutional boron might not be reliable.     

Topological insights into the nature of the halogen-carbon bonds in dimethylhalonium ylides and their cations

In this study the nature of the bonding in a series of dimethylhalonium ylides (fluoronium, chloronium, bromonium and iodonium) was analyzed by means of topological methodologies (AIM and ELF analysis), to document the changes in the nature of the C-X bonds (X = F, Cl, Br, I) upon the series. For the sake of comparison the same study was performed on the corresponding dimethylhalonium cations (XC 2H 6 (+)) and the XCH 3 series. The wave functions used for the topological analysis were obtained at B3LYP level using extended triple-zeta basis sets. The formation of the cationic XC 2H 6 (+) structures can be interpreted to arise from the interaction between the XCH 3 and CH 3 (+) moieties. The resultant structures can be explained in terms of the superposition of two electrostatically interacting and two dative mesomeric structures. The halogen-carbon bonds have all the characteristics of the charge-shift (CS) bonds. The analysis of the C-X bond in the XC 2H 5 series shows a progressive reinforcing of the CH 3X-CH 2 bond, from FC 2H 5 that can be considered as formed from two fragments, FCH 3 and CH 2, to IC 2H 5, in which the CH 3I-CH 2 bond has all the features of a multiple bond involving atoms bearing lone pairs. Particularly interesting is BrC 2H 5, in which a special type of bond (hybrid covalent-dative double bond) has been characterized. The energetic stability of the XC 2H 5 structures with respect to the dissociation into the XCH 2 + CH 3 and XCH 3 + CH 2 ground-state fragments was studied in detail.     

Ferromagnetic intermolecular interaction in the galvinoxyl radical: Cooperation of spin polarization and charge-transfer interaction

The orbital energies and the intermolecular overlap integrals of the galvinoxyl radical are calculated. It is found that the ferromagnetic intermolecular interaction in galvinoxyl can be qualitatively interpreted by a combined effect of spin polarization within the radical and charge-transfer interaction between the radicals.     

Iron-catalyzed olefin epoxidation in the presence of acetic acid: insights into the nature of the metal-based oxidant

The iron complexes [(BPMEN)Fe(OTf)2] (1) and [(TPA)Fe(OTf)2] (2) [BPMEN = N,N'-bis-(2-pyridylmethyl)-N,N'-dimethyl-1,2-ethylenediamine; TPA = tris-(2-pyridylmethyl)amine] catalyze the oxidation of olefins by H2O2 to yield epoxides and cis-diols. The addition of acetic acid inhibits olefin cis-dihydroxylation and enhances epoxidation for both 1 and 2. Reactions carried out at 0 degrees C with 0.5 mol % catalyst and a 1:1.5 olefin/H2O2 ratio in a 1:2 CH3CN/CH3COOH solvent mixture result in nearly quantitative conversions of cyclooctene to epoxide within 1 min. The nature of the active species formed in the presence of acetic acid has been probed at low temperature. For 2, in the absence of substrate, [(TPA)FeIII(OOH)(CH3COOH)]2+ and [(TPA)FeIVO(NCCH3)]2+ intermediates can be observed. However, neither is the active epoxidizing species. In fact, [(TPA)FeIVO(NCCH3)]2+ is shown to form in competition with substrate oxidation. Consequently, it is proposed that epoxidation is mediated by [(TPA)FeV(O)(OOCCH3)]2+, generated from O-O bond heterolysis of the [(TPA)FeIII(OOH)(CH3COOH)]2+ intermediate, which is promoted by the protonation of the terminal oxygen atom of the hydroperoxide by the coordinated carboxylic acid.     

Mechanistic insights into methylene blue removal via olive stone-activated carbon: A study on surface porosity and characterization

Global attention is increasingly focused on the adverse health and environmental impacts of textile dyes, marking the necessity for effective and sustainable dye remediation strategies in industrial wastewater. This study introduces a novel, eco-friendly activated carbon produced from olive stones (OLS), a readily available by-product of the olive oil industry. The OLS was chemically activated with H₃PO₄ and KOH, creating two materials: OLS-P and OLS-K, respectively. These were then utilized as cost-effective adsorbents for the removal of methylene blue (MB) dye. The activated materials were characterized via X-ray diffraction (XRD), Fourier transform infra-red spectroscopy (FTIR), iodine number, and pHpzc analysis, with the zero-point charge determined as approximately pH 1 for OLS-P and pH 8 for OLS-K. Batch adsorption experiments conducted at various temperatures revealed that adsorption process followed the pseudo-second-order kinetic model and the Langmuir isotherm model. Temperature was found to significantly impact adsorption performance, with OLS-K demonstrating a substantial increase in adsorption capacity (q_e) from 6.27 mg/g at 23˚C to 94.7 mg/g at 32 ˚C. Conversely, OLS-P displayed a decrease in q_e from 16.78 mg/g at 23 ˚C to 3.67 mg/g at 32 ˚C as temperature increased. The study highlights the potential of KOH-treated olive stones as a promising, cost-efficient adsorbent for methylene blue remediation from wastewater.     

Theoretical study of the intermolecular hydrogen bond interaction for furan-HCl and furan-CHCl_3 complexes

The importance of intermolecular interactions in biology and material science has prompted chemists to explore the nature of the variety of such interactions. The strongest of these interac-tions are the hydrogen bonds, which play an important role in determining the molecular confor-mation, crystal packing, and the structure of biological systems such as nucleic acids. Extensive experimental and theoretical efforts[1—5] have been devoted to the studies of this type of interac-tions, such as …     

Catalytic intermolecular amination of C-H bonds: method development and mechanistic insights

Reaction methodology for intermolecular C-H amination of benzylic and 3 degrees C-H bonds is described. This process uses the starting alkane as the limiting reagent, gives optically pure tetrasubstituted amines through stereospecific insertion into enantiomeric 3 degrees centers, displays high chemoselectivity for benzylic oxidation, and enables the facile preparation of isotopically enriched 15N-labeled compounds. Access to substituted amines, amino alcohols, and diamines is thereby made possible in a single transformation. Important information relevant to understanding the initial steps in the catalytic cycle, reaction chemoselectivity, the nature of the active oxidant, and pathways for catalyst inactivation has been gained through mechanistic analysis; these studies are also presented.