The Theoretical and Experimental Studies on Oxidation of Straight Chain Amino Acids in Moderately Concentrated Sulfuric Acid Medium

The kinetics of the permanganic oxidation process of some straight chain amino acids in moderately concentrated sulfuric acid medium have been investigated using a spectrophotometric technique. Conclusive evidences have proven autocatalytic activity of Mn(II) for these reactions. It is determined that even and odd effects of the number carbon atom in a carbon chain are annihilated when it's the number of carbon atoms is increased more than of three in a noncatalytic oxidation pathway. Thus, rate constants belonging to glycine, l ‐α‐amino‐n‐butyric acid, l ‐norleucine, and l ‐α‐amino‐n‐heptanoic acid satisfy Taft's equation involving the induction factor in the noncatalytic pathway, whereas l ‐α‐amino‐n‐heptanoic acid has an odd number of carbon atom in its chain carbon. On the other hand, in the catalytic pathway, rate constants satisfy Taft' equation including inductive and steric factors, when rate constants belonging to amino acids with an even number of carbon atoms are separated from those with an odd number of carbon atoms. The oxidation process of amino acids in the noncatalytic pathway and those with the even number of carbon atoms in the carbon chain in the catalytic pathway speeds up by an increase in the length of chain that is accompanied with an increase in the carbon chain's electron‐donating characteristic. On the other hand, an increase in the length of the carbon chain is accompanied with more steric hindrance, which counteracts its electron‐donating character, thereby decreasing reaction rate in the catalytic pathway. Finally, amino acid–Mn(II) complexes were studied using a density functional theory method. Results obtained show that such a complex is less stable than reactants, namely it is formed in an endothermic reaction. The number and strength of hydrogen bonding belonging to amino acid is more than those of the amino acid–Mn(II) complex. Besides, it has been illustrated that natural bond orbital analysis and molecular orbital calculations satisfy the findings.     

Kinetics and mechanism of the dehydration reaction of sarcosine to a bislactame through diacyclperoxide intermediate in strong acidic medium

The influence of substitution on the amine functional group of glycine in the permanganic oxidation of such an α‐amino acid in moderately concentrated sulfuric acid medium has been investigated. Reaction products analysis has revealed that contrary to the usual α‐amino acid oxidation product, which is an aldehyde species, a valuable compound, namely 1,4‐dimethylpiperazine‐2,5‐dione, has been obtained as the main product via a cheap, simple, efficient, and novel method. Sarcosine has been chosen as a substituted derivative of glycine, and the kinetics and mechanism of its permanganic oxidation have been investigated using a spectrophotometric technique. Conclusive evidence has proven delayed autocatalytic activity for Mn(II) in this reaction, analogous to some α‐amino acids. It has been revealed that such activity can show up when a certain concentration ratio of Mn(II) to sarcosine is built up in the medium, which we call the “critical ratio.” The magnitude of the latter ratio depends on the sulfuric acid concentration. Considering the “delayed autocatalytic behavior” of Mn(II) ions, rate equations satisfying observations for both catalytic and noncatalytic routes have been presented. The reaction shows first‐order dependence on permanganate ions and sarcosine concentrations in both catalytic and noncatalytic pathways, and apparent first‐order dependence on Mn²⁺ ions in catalytic pathways. The correspondence of pseudo‐order rate constants of the catalytic and noncatalytic pathways to Arrhenius and Eyring laws has verified “critical ratio” as well as “delayed autocatalytic behavior” concepts. The activation parameters associated with both pathways have been computed and discussed. Mechanisms for both catalytic and noncatalytic routes involving radical intermediates as well as a product having a diketopiperazine skeleton have been reported for the first time. © 2009 Wiley Periodicals, Inc. Int J Chem Kinet 41: 689–703, 2009     

Conclusive evidence for delayed autocatalytic behavior of Mn(II) ions at a critical concentration

The kinetics of the permanganic oxidation process of glycine, L-alanine and L-leucine in strong acid media were investigated using a spectrophotometric technique. Conclusive evidence has proven that the autocatalytic activity of Mn(II) in these reactions in strong acidic media is analogous to that of weak acid media, but in the former, Mn(II) ions should acquire a critical concentration for them to show autocatalytic characteristics. This critical concentration depends on the nature of the amino acid used. Considering the delayed autocatalytic behavior of Mn(II) ions, we herein present the rate equations and mechanisms satisfying observations for both catalytic and noncatalytic routes. The correspondence of the pseudo-order rate constants of the catalytic and noncatalytic pathways to Eyring law verify both the critical concentration as well as the delayed autocatalytic behavior concepts. In general, the onset of delayed behavior can be attributed to the concentration ratio of Mn(II) to amino acid which can be of a certain value for any particular amino acid.     

Synthesis of polypeptides from activated urethane derivatives of α‐amino acids

A series of activated urethane‐type derivatives of α‐amino acids were synthesized and applied to polypeptide synthesis. The urethane used herein, N‐(4‐nitrophenoxycarbonyl)‐α‐amino acids 1 , were synthesized by N‐carbamoylation of γ‐benzyl‐L ‐glutamate, β‐benzyl‐L ‐aspartate, L ‐leucine, L ‐phenylalanine, and L ‐proline, with 4‐nitrophenyl chloroformate. When 1 was dissolved in N,N‐dimethylacetamide (DMAc) and heated at 60 °C, it was smoothly converted into the corresponding polypeptides with releasing 4‐nitrophenol and carbon dioxide. Spectroscopic analyses of the obtained polypeptides revealed that they were comparable with the authentic polypeptides synthesized by the ring‐opening polymerizations of amino acid N‐carboxyanhydrides (NCAs). Besides the successful polycondensations of a series of 1 , their polycondensations of 1a and other 1 were also successfully carried out to obtain the corresponding statistic copolypeptides. © 2008 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 46: 2525–2535, 2008     

Cyclic polypeptides by thermal polymerization of α‐amino acid N‐carboxyanhydrides

The NCAs of the following five amino acids were polymerized in bulk at 120 °C without addition of a catalyst or initiator: sarcosine (Sar), L ‐alanine (L ‐Ala), D ,L ‐phenylalanine (D ,L ‐Phe), D ,L ‐leucine (D ,L ‐Leu) and D ,L ‐valine (D,L ‐Val). The virgin reaction products were characterized by viscosity measurements ¹³C NMR spectroscopy and MALDI‐TOF mass spectrometry. In addition to numerous low molar mass byproducts cyclic polypeptides were formed as the main reaction products in the mass range above 800 Da. Two types of cyclic oligo‐ and polypeptides were detected in all cases with exception of sarcosine NCA, which only yielded one class of cyclic polypeptides. The efficient formation of cyclic oligo‐ and polypeptides explains why high molar mass polymers cannot be obtained by thermal polymerizations of α‐amino acid NCAs. Various polymerization mechanisms were discussed. © 2008 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 46: 4012–4020, 2008     

Kinetics and Mechanism of the Autocatalytic Oxidation of L-Asparagine in a Moderately Concentrated Sulfuric Acid Medium

The reaction kinetics of the Autocatalytic Oxidation of L-asparagine by permanganate ions has been investigated in moderately strong acid medium using the spectrophotometric technique. In all cases studied, an autocatalytic effect due to Mn²⁺ ions formed as a reaction product was observed. Both catalytic and noncatalytic processes were determined to be first order with respect to the permanganate ions while a first and a fractional order with respect to the amino acid for noncatalytic and catalytic reactions were obtained, respectively. The overall rate equation for this process may be written asd[MO₄ ^–]/dt= k´₁[MnO₄ ^–]+k´₂[MnO₄ ^–][Mn⁺²],where k´₁ and k´₂ are rate pseudoconstants for noncatalytic and catalytic reactions, respectively. The influence of some factors such as temperature and reactant concentration on the rate constants has been studied, and the activation parameters have been calculated. Reaction mechanisms satisfying observations for both catalytic and noncatalytic routes have been presented.     

Highly Stereoselective Recognition and Deracemization of Amino Acids by Supramolecular Self‐Assembly

The highly stereoselective supramolecular self‐assembly of α‐amino acids with a chiral aldehyde derived from binol and a chiral guanidine derived from diphenylethylenediamine (dpen) to form the imino acid salt is reported. This system can be used to cleanly convert D ‐amino acids into L ‐amino acids or vice versa at ambient temperature. It can also be used to synthesize α‐deuterated D ‐ or L ‐amino acids. A crystal structure of the ternary complex together with DFT computation provided detailed insight into the origin of the stereoselective recognition of amino acids.     

Effects of polydepsipeptide side‐chain groups on the temperature sensitivity of triblock copolymers composed of polydepsipeptides and poly(ethylene glycol)

To develop new types of biodegradable polymers possessing predictable responses to changes in temperature, ABA‐type and BAB‐type triblock copolymers composed of various polydepsipeptides (PDP) and poly(ethylene glycol) (PEG) (PDP‐PEG‐PDP and PEG‐PDP‐PEG) were synthesized. The specific focus of this study was on the effect of the different side‐chain groups of various amino acids on the temperature‐responsive behavior of the triblock copolymers. An ABA‐type triblock copolymer containing the less hydrophobic glycine (PGG‐PEG‐PGG) did not exhibit any temperature‐responsive behavior; however, ABA‐type triblock copolymers containing the hydrophobic α‐amino acids, L ‐leucine and L ‐phenylalanine (PGL‐PEG‐PGL or PGF‐PEG‐PGF), did exhibit temperature‐responsive behavior. The cloud point of PGF‐PEG‐PGF was 10 °C lower than that of PGL‐PEG‐PGL. It can be possible to control temperature‐sensitivity by changing not only PDP segment length but also kind of α‐amino acid in PDP segment. Moreover, BAB‐type triblock copolymer containing L ‐leucine (PEG‐PGL‐PEG) showed temperature‐responsive sol‐gel transition. Because polydepsipeptides are biodegradable polymers, the information obtained in this study is useful to design biodegradable injectable polymers having controllable temperature‐sensitivity for biomedical use.© 2009 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 47: 3892–3903, 2009     

Oxidation of lactic acid by water soluble (colloidal) manganese dioxide

Spectrophotometric method has been used to characterize water‐soluble colloidal manganese dioxide obtained by the redox reaction between sodium thiosulphate and potassium permanganate in neutral aqueous medium which shows a single peak in the visible region with λ_max = 425 nm. The kinetics of the oxidation of lactic acid by colloidal manganese dioxide (oxidant) has been investigated spectrophotometrically under pseudo‐first‐order conditions of excess lactic acid. The rate of the noncatalytic reaction pathway was slow which increased with increasing lactic acid concentration. The reaction was first‐order with respect to [oxidant] as well as [lactic acid]. In presence of manganase(II) and fluoride ions, the noncatalytic path disappeared completely while the oxidation rate of autocatalytic path increased and decreased, respectively with increasing [Mn(II)] and [F^?]. A mechanistic scheme in conformity with the observed kinetics has been proposed with the rate‐law: © 2004 Wiley Periodicals, Inc. Int J Chem Kinet 36: 359–366 2004     

Enantioseparation of DL-isocitric acid by a chiral ligand exchange CE with Ni(II)-D-quinic acid system

The ratio of citric acid to D ‐isocitric acid can be used to distinguish authentic and adulterated fruit juices. To separate DL ‐isocitric acid enantiomers, we used ligand exchange CE. D ‐Quinic acid was used as a chiral selector ligand and Mn(II), Fe(III), Co(II), Ni(II), Cu(II), and Zn(II) ions were used as the central ions of the chiral selector in the BGE. DL ‐Isocitric acid was found to be enantioseparated with the above metal ions except for Mn(II) ion. The optimum running conditions for the analysis of D ‐ and L ‐isocitric acids along with citric acid, an isomer of isocitric acid, were found to be a BGE (pH 5.0) containing 30% ACN, 20 mM acetic acid, 20 mM NiSO₄, and 80 mM D ‐quinic acid. Under these conditions, DL ‐isocitric and citric acids in fruit juices were analyzed successfully.     

Organocatalysts Derived from Unnatural α‐Amino Acids: Scope and Applications

The organocatalytic properties of unnatural α‐amino acids are reviewed. Post‐translational derivatives of natural α‐amino acids include 4‐hydroxy‐l ‐proline and 4‐amino‐l ‐proline scaffolds, and also proline homologues. The activity of synthetic unnatural α‐amino acid‐based organocatalysts, such as β‐alkyl alanines, alanine‐based phosphines, and tert‐leucine derivatives, are reviewed herein. The organocatalytic properties of unnatural monocyclic, bicyclic, and tricyclic proline derivatives are also reviewed. Several families of these organocatalysts permit the efficient and stereoselective synthesis of complex natural products. Most of the reviewed organocatalysts accelerate the reported reactions through covalent interactions that raise the HOMO (enamine intermediates) or lower the LUMO (iminium intermediates).     

Synthesis of Amino Acid‐comprising Sialyltransferase Inhibitors and Their Antimetastatic Activities against Human Breast Cancer Cells

The amino acid‐containing lithocholic acids (LCA) represent a new class of human sialyltransferase (ST) inhibitors. In this study, we have reported their design, synthesis, and inhibitory activity against human STs. Among these derivatives, D ‐Glu‐LCA 7 , L ‐Asp‐L ‐Asp‐LCA 13 , and L ‐Asp‐L ‐Asp‐Gly‐Gly‐LCA 22 with specific amino acid sequence were the most active ones with IC₅₀ values of 2.3–5.6 and 4.2‐6.2 μM toward α‐2,3‐ST and α‐2,6‐ST, respectively. The current study demonstrates that the new class of ST in‐ hibitors inhibit cell migration in breast cancer cells by preventing closure of the wound rather than involv‐ ing a direct antiproliferative effect.     

Effect of Anchimeric Assistance in the Reaction of Triphenylphosphine with α,β‐Unsaturated Carboxylic Acids

Quaternization of triphenylphosphine with maleic and cis‐aconitic acids is strongly accelerated by participation of the cis‐carboxyl group in stabilization of the phosphonium zwitterion intermediate by intramolecular hydrogen bonding, in spite of steric hindrance by the acid's reaction center. A similar effect for trans‐isomeric acids is not observed, which can be rationalized on the basis of spatial structures of the generated zwitterions, implying an electrostatic interaction between the phosphonium center and carbonyl oxygen atom. The effect of anchimeric assistance decreases when the intramolecular hydrogen bonding disfavors attack of the phosphine on the sterically less hindered carbon atom of the C=C bond, as observed for cis‐aconitic acid.     

Polycondensation of α‐amino acid esters in the presence of yttrium triflate as a Lewis acid

To develop polycondensation methods for poly(α‐amino acid)s, we describe a first examination to use yttrium triflate as a Lewis acid for polycondensation of α‐amino acid esters. In the absence of Lewis acid, no polycondensation of 2‐methoxyphenyl glycinate ( 1b ) at room temperature proceeded. While the polycondensation of 1b was carried out with 5 mol % yttrium triflate, a condensation product of glycine was obtained in 16% yield. Although polycondensation of 4‐nitrophenyl L ‐leucinate ( 1c ) and 4‐nitrophenyl L ‐valinate ( 1d ) were also promoted with 5 mol % yttrium triflate, the condensation products of both α‐amino acid esters were obtained in only a few percent yield. When 1d was polymerized in the presence of 100 mol % yttrium triflate, high molecular weight poly(L ‐valine) was obtained in 91% yield. © 2006 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 44: 4731–4735, 2006     

Electrocatalytic Determination of Vitamin C Using Calixarene Modified Carbon Paste Electrodes

Effect of in situ complexation of some ions with variable valencies, like Co(II), Ni(II), Mn(II), Cu(II) and Pb(II) on the the electrooxidation of Vitamin C (L ‐ascorbic acid) was studied by cyclic voltammetry using carbon paste electrodes modified with p‐tert‐butylcalix[4]arene and p‐tert‐butylcalix[6]arene in perchloric acid, acetic acid and ammonium acetate media. Pb(II) was found to bind strongly with p‐tert‐butylcalix[4]arene in acetate medium, resulting in its being retained at the electrode surface and catalyzing the oxidation of ascorbic acid. The overpotential was reduced by about 200 mV with an increase in the peak currents. Linearity was observed over the range of 0.07–400 ppm with a detection limit of 30 ppb by differential pulse voltammetry. Interferences of some common substances like sugars and amino acids were studied and the modified electrode was used for the determination of vitamin C in commercial samples.     

Synthesis,characterization, and catalytic activity of titanium iminophenoxide complexes in relation to the ring‐opening polymerization of L‐lactide and ε‐caprolactone

This study synthesized a series of titanium iminophenoxide complexes and investigated their suitability as catalysts for the ring‐opening polymerization of L ‐lactide (L ‐LA) and ε‐caprolactone (CL). Complexes with bidentate ligands demonstrate higher catalytic activity than their tridentate counterparts since the third coordination atom needs to contend with L ‐LA and CL. Differences in the geometric framework of bidentate ligands also influence the catalytic activity. Type II ligands (N, N‐trans form of Ti complex) prevent the coordination of monomers to Ti thereby decreasing the initiation rate. © 2012 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2013     

Microstructural characterization of terpolymers of leucine, β‐benzyl aspartate,and valine

Three different characterization methods—¹³C NMR spectroscopy, a terminal terpolymerization model, and a probability analysis based on the Poisson distribution—were used to determine the microstructure of random terpolymers. The methods were used to determine the amino acid sequence distribution of random terpolymers prepared from the polymerization of N‐carboxyanhydrides that contained L ‐leucine, β‐benzyl‐L ‐aspartate, and L ‐valine. Poly(L ‐leucine‐L ‐aspartic acid‐L ‐valine) [poly(LDV)] was designed as a target specific substrate for the α₄β₁ integrin that recognizes the tripeptide sequence leucine‐aspartic acid‐valine (LDV). The presence of the tripeptide sequence LDV within the polymer was determined to be eight LDV triad sequences on average in terpolymers of approximately 100 kDa. © 2006 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 44: 4328–4337, 2006     

Synthesis of optically active hydroxyphosphonates

The reduction of dimenthyl ketophosphonates with sodium borohydride involves asymmetric induction at the α‐carbon atom, resulting in a small excess of the (R)‐enantiomer of the α‐hydroxyphosphonate formed. A higher ee purity was achieved if the reduction of chiral dimenthyl ketophosphonates was carried out by the chiral complex of NaBH₄‐L ‐proline, owing to the double asymmetric induction at the α‐carbon atom. The hydroxyphosphonates obtained were isolated in a diastereomerically pure state and were transformed to the optically active, free hydroxyalkylphosphonic acids. The (R)‐configuration of one of them was proved by X‐ray crystal structure analysis. © 2008 Wiley Periodicals, Inc. Heteroatom Chem 19:133–139, 2008; Published online in Wiley InterScience ( www.interscience.wiley.com ). DOI 10.1002/hc.20391     

Determination of the enantiomers of α‐hydroxy‐ and α‐amino acids in capillary electrophoresis with contactless conductivity detection

The enantiomers of the anions of five α‐hydroxy acids, namely lactic acid, α‐hydroxybutyric acid, 2‐hydroxycaproic acid, 2‐hydroxyoctanoic acid and 2‐hydroxydecanoic acid, as well as the two α‐amino acids aspartic acid and glutamic acid, were baseline separated and detected by CE with contactless conductivity detection. Vancomycin was employed as chiral selector and could be used with conductivity detection without having to resort to a partial filling protocol as needed when this reagent is used with UV absorbance measurements. The procedure was successfully applied to the determination of the lactic acid enantiomers in samples of milk and yogurt. Linearity was achieved in the concentration range of 10–500 μmol/L with good correlation coefficients (0.9993 and 0.9990 for L ‐ and D ‐lactic acid, respectively). The LODs (3 S/N) for L ‐ and D ‐lactic acid were determined as 2.8 and 2.4 μmol/L, respectively.     

Metal(II)–ligand molar ratio dependence of enantioseparation of tartaric acid by ligand exchange CE with Cu(II) and Ni(II)–D‐quinic acid systems

Enantioseparation of tartaric acid by ligand exchange CE with a Cu(II)–D ‐quinic acid system was studied. Racemic tartaric acid was enantioseparated by ligand exchange CE using BGEs containing relatively low Cu(II)–D ‐quinic acid molar ratios ranging from 1:1 to 1:3 and high molar ratios ranging from 1:8 to 1:12 but was not enantioseparated using BGEs with medium molar ratios ranging from 1:4 to 1:6. While the migration order of D ‐tartaric acid was prior to L ‐tartaric acid at the lower Cu(II)–D ‐quinic acid molar ratios, the enantiomer migration order was reversed at the higher molar ratios. These results were compared with those for Ni(II)–D ‐quinic acid system. The molar ratio dependence of enantiomer migration order can be attributed to a change in the coordination structure of Cu(II) ion with D ‐quinic acid.