The determination of sulfoxide configuration in six-membered rings using NMR spectroscopy and DFT calculations

Cyclic six-membered ring sulfoxides and sulfones were prepared by a stepwise in situ oxidation of the corresponding sulfides with meta-chloroperbenzoic acid in an NMR tube. The oxidation was followed by NMR spectra and the ¹H and ¹³C NMR data were collected. The geometries of all of the compounds were optimized using the DFT B3LYP/6-31G^∗∗ method and the ¹³C and ¹H NMR chemical shifts were calculated for geometry-optimized structures with the DFT B3LYP/6-31++G^∗∗ method. The calculated ¹³C NMR chemical shifts induced by oxidation (Δδ values) are in very good agreement with the experimental data and can be used to determine the oxidation state of the sulfur atom (-S-, -SO-, -SO₂-). The characteristic differences of the induced oxidation chemical shifts of carbon atoms at the α- and β-position to sulfur were successfully used for distinguishing between the diastereoisomeric sulfoxides.     

Pulsed fourier transform NMR of substituted aryltrimethyltin derivatives : III. Proton data at 100 MHz and the derived Hammett σ-constant of the trimethyltin group

Proton NMR data at 100 MHz are reported for thirteen para- and meta-substituted phenyltrimethyltin compounds, XC₆H₄Sn(CH₃)₃, where X = para-N(CH₃)₂, para-OCH₃, para-OC₂H₅, para-CH₃, meta-CH₃, -H, para-F, meta-OCH₃, para-Cl, para-Br, meta-F, meta-Cl and para-Sn(CH₃)₃. Correlation coefficients with Hammett σ-constants of greater than 0.95 are obtained with the methyltin proton chemical shifts and coupling constants to carbon [¹J(¹³C¹H)] and tin [²J(SnC¹H)]. Solvent effects and other extraneous factors invalidate comparisons of ? values in terms of the relative attenuation of the transmission of substituent effects through homologous carbon, silicon, germanium and tin systems, but coupling constant data reflect a diminution of ca. one tenthfold per bond in the order ?[C(1)Sn] > ? [SnC] > ? [CH]. Satisfactory correlations (r > 0.95) are obtained in this series of closely-related compounds among the conventionally recorded two-bond, ²J(SnC¹H) and the constituent, one-bond ¹J (Sn¹³C) and J(¹³C¹H) coupling constants, but the correlation coefficient for the comparison between the two one-bond couplings, ¹J(Sn¹³C) and ¹J(¹³C¹H) is lower (r = 0.872). Changes in the couplings at the methyltin carbon bond tin-119 atoms are interpreted in terms of isovalent hybridization; a model based upon effective nuclear charges is tested with respect to both NMR coupling constants and ¹¹⁹Sn Mössbauer Isomer shifts at tin and is invalidated. Proton and carbon-13 NMR, chemical shift and coupling constant data are used to derive a Hammett σ-constant for the para-trimethyltin group of ?0.14, and the significance of this value is discussed.     

The determination of sulfoxide configuration in five-membered rings using NMR spectroscopy and DFT calculations

Cyclic five-membered ring sulfoxides and sulfones were prepared by a stepwise in situ oxidation of the corresponding sulfides with meta-chloroperbenzoic acid in an NMR tube. The oxidation was followed by NMR and both ¹H and ¹³C NMR data were collected. The geometries of all of the compounds were optimized using the DFT B3LYP/6-31G⁷ method and the ¹³C and ¹H chemical shifts were calculated for geometry-optimized structures with the DFT B3LYP/6-31++G⁷ method. The calculated ¹³C chemical shifts induced by oxidation (Δδ values) were in very good agreement with the experimental data and could be used to determine the oxidation state of the sulfur atom (–S–, –SO–, –SO₂–). The characteristic differences of the induced oxidation chemical shifts of the carbon atoms in the α-position and β-position to sulfur were successfully used to distinguish between the diastereoisomeric sulfoxides and allowed configuration determination.     

Solution structure of bis(acetoxy)iodoarenes as observed by O NMR spectroscopy

A group of para-substituted bis(acetoxy)iodoarenes has been studied by ¹⁷O and ¹³C NMR. Only one signal for all the oxygens of the acetoxy groups has been observed. Both ¹⁷O and ¹³C chemical shifts of this group show a strong invariance with para substitution. The absence of covalent I-O bonds and an ion pair structure is proposed for the title compounds.     

Natural abundance 13C NMR investigation of substituted bromobenzene using noise decoupling of proton resonances

The natural abundance ¹³C NMR spectra of bromobenzene and ten derivatives have been obtained using the technique of noise modulated decoupling of the proton resonances. Assignments have been made for all ¹³C resonance signals using an additivity rule. The chemical shifts of the aromatic carbon nuclei in the para-substituted compounds are discussed in terms of the Taft parameters (σ_R, σ_I) and the electronegativity of the substituent.     

Electronic effects in the cyclopentadienyl ring. The 13C NMR spectraof monosubstituted ferrocenes

The chemical shifts of C(2,5) and C(3,4) carbons in the ¹³C NMR spectra of monosubstituted ferrocenes have been assigned using deuterium labelling. An analogy is observed between the shielding of C(2,5) and C(3,4) carbons of ferrocene derivatives and ortho- and para-carbons of benzene derivatives withthe same substituents. Electron-density distribution in the cyclopentadienyl ring is discussed on the basis of ¹³C NMR data.     

Estimation and prediction of 13C NMR chemical shifts of carbon atoms in both alcohols and thiols

Quantitative structure-spectrum relationship calculations of ¹³C NMR chemical shifts of both 302 carbon atoms in 56 alcohols and 62 carbon atoms in 15 thiols are described using several parameters: the atomic ionicity index (INI), the polarizability effect index (PEI), and stereoscopic effect parameters (?) of the compounds. The ¹³C NMR chemical shifts for these compounds of both alcohols and thiols can be estimated through the multiple linear regression (MLR). A MLR model was built with variable screening by the stepwise multiple regression and examined by validation on its stability. The correlation coefficient of the established model as well as the leave-one-out cross-validation was 0.9724 and 0.9716 respectively. The results obviously indicate that INI and ? are linearly related with ¹³C NMR chemical shifts, which provides a new method for calculating ¹³C NMR chemical shifts in the compounds of both alcohols and thiols.     

Zur Kenntnis des Chinoiden Zustandes—XX: 13CMR-Untersuchungen an Cyclohexadienonen

The ¹³C-NMR-chemical shifts of 19 para- and 5 ortho-cyclohexadienones are determined by ¹³C-Fourier-transformation spectroscopy and assigned. The effect of substituents on the chemical shift of the ring carbon atoms is discussed. The mutual dependence of the shifts of the olefinic ring carbons and the allylic carbon atom in the para-quinolid ring system is shown by computing regression lines. A frequently observed correlation between ¹³C-NMR and ¹H-NMR is examined in the case of cyclohexadienones.     

Carbon-13 NMR and CNDO/2 studies of phenoxachalcogenins

The ¹³C chemical shifts of the carbon atoms in dibenzodioxin, phenoxathiin, phenoxaselenin and phenoxatellurin were determined in CDCl₃ solutions and assigned. The total (σ and π) charge densitites on the carbon atoms calculated by the CNDO/2 method without consideration of d-orbitals correlated well with the experimentally determined shifts. Rather good agreement was also found between experimental shifts and shifts calculated from ¹³C data for phenyl methyl chalcogenides on the assumption that a phenoxachalcogenin molecule can be assembled from C₆H₅O and C₆H₅X groups. Only the shifts of the carbon atoms bonded to the heavier chalcogen atoms show an upfield trend in the sequence O, S, Se, Te. All other shifts exhibit a downfield trend. These trends are rationalized in terms of the electronegativities, abilities to participate in π-interactions, and anisotropy effects of the chalcogen atoms.     

Investigation of substituent effects of chalcones by 13C n.m.r. spectroscopy

¹³C chemical shifts for 23 para- and meta-substituted chalcones of the types 1 and 2 have been determined. The aromatic shieldings are compared with previous results for other aromatic derivatives. Correlations of the ¹³C chemical shifts of vinyl carbons and carbonyl carbons as well as ring carbons with Hammett σ parameters, π electron densities and the reactivity parameters of Swain and Lupton provide a consistent picture of electronic effects transmitted through the carbon framework of the compounds studied.     

13C NMR chemical shifts of benzophenone azine as a benchmark for configurational assignment of azines with aromatic substituents

An analysis of the ¹³C NMR spectral data and quantum chemical calculations for benzophenone azine shows that the shielding constant of the C _ipso atom of its molecule is stereo-specific. The characteristic difference in chemical shifts of the C _ipso atoms of the phenyl rings in the cis- and trans-positions with respect to the lone pair of the neighboring nitrogen atom is 2–3 ppm. The stereospecificity observed for chemical shifts was proposed to be used for the configurational assignment of azines containing aromatic substituents.     

Carbon-13 nuclear magnetic resonance spectroscopy—VII:para-substituted fluorobenzenes

C-13 and F-19 NMR spectra of seventeen para-substituted fluorobenzenes were measured and the chemical shifts as well as coupling constants with respect to substituents were analysed. The chemical shifts of the fluorine, the C₁ and the C₂ atoms were found to depend on the total electron densities. In the case of the C₃ atom, the chemical shifts seem to depend on π-electron densities rather than the total electron densities. The present calculations also indicate that the chemical shift of the C₄ atom depends mainly on σ-electron densities due to the inductive effects of substituents. The strongest factor influencing the coupling constant, ⁿJ(C? F), is also considered to be the π-electron densities on the carbon atoms. In the case of the direct couplings, ¹J(C? F), the π-bond orders are important.     

13C, 14N, 15N and 17O NMR spectra of nitropyrroles and nitroimidazoles

Carbon, nitrogen and oxygen NMR spectra of some nitro derivatives of pyrrole and imidazole have been investigated. The ¹³C chemical shifts of para-carbons and the ¹⁷O chemical shifts of the nitro group correlate qualitatively with the electron densities on these carbon and oxygen atoms, which in turn depend upon the degree of conjugation of the nitro groups with the heterocyclic ring. Conjugation of several nitro groups with the benzene ring is in most cases not impaired by mutual interactions and the ¹³C shifts show good additivity. Such additivity is much worse in pyrrole and imidazole derivatives. Taken together with the diamagnetic nature of these deviations from additivity, this leads to a possible conclusion about the less pronounced conjugation of the nitro groups with the heterocyclic ring in heterocyclic dinitro derivatives.     

Reversed substituent effect for the 13C NMR chemical shifts in the unsubstituted ring of para-substituted benzophenones

The ¹³C NMR chemical shifts of the C-1′ carbon atom of fifteen para-substituted benzophenones correlate with the ? and ? substituent constants in a reversed manner.     

Application of 1H and 13C NMR to the structural elucidation of tetrahydroquinoxalines condensed with five-membered heterocycles

¹H and ¹³C NMR spectral data for 21 N-methyltetrahydroquinoxalines annelated with furan, pyrrole, imidazole or thiazole rings are reported. Unambiguous assignments of the ring junction ¹³C resonances were made on the basis of selective decoupling experiments and with the aid of one-bond and long-range ¹³C–¹H coupling constants. The effects of five-membered heterocycles on the ¹H and ¹³C chemical shifts of the ring junction hydrogen and carbon atoms are considered. Values of one-bond ¹J(CH) and vicinal ³J(HH) coupling constants between the ring junction protons are also discussed as a diagnostic means for structural elucidation of tetrahydroquinoxalines condensed with five-membered heterocycles.     

Scaling factors for carbon NMR chemical shifts obtained from DFT B3LYP calculations

A linear scaling of the calculated chemical shifts is used in order to improve the accuracy of the DFT predicted ¹³C NMR chemical shifts. The widely applied method of GIAO B3LYP/6-311+G(2d,p) using the B3LYP/6-31G(d) optimized geometries is chosen, which allows cost-effective calculations of the ¹³C chemical shifts in the molecular systems with 100 and more atoms. A set of 27 ¹³C NMR chemical shifts determined experimentally for 22 simple molecules with various functional groups is used in order to determine scaling factors for reproducing experimentally measured values of ¹³C chemical shifts. The results show that the use of a simple relationship (δ_scalc = 0.95 δ_calc + 0.30, where δ_calc and δ_scalc are the calculated and the linearly scaled values of the ¹³C chemical shifts, respectively) allows to achieve a three-fold improvement in mean absolute deviations for 27 chemical shifts considered. To test the universal applicability of the scaling factors derived, we have used complex organic molecules such as taxol and a steroid to demonstrate the significantly improved accuracy of the DFT predicted chemical shifts. This approach also outperforms the recently recommended usage of the Hartree-Fock optimized geometries for the GIAO B3LYP/6-311+G(2d,p) calculations of the ¹³C chemical shifts.     

Observed and calculated 1H and 13C chemical shifts induced by the in situ oxidation of model sulfides to sulfoxides and sulfones

A series of model sulfides was oxidized in the NMR sample tube to sulfoxides and sulfones by the stepwise addition of meta‐chloroperbenzoic acid in deuterochloroform. Various methods of quantum chemical calculations have been tested to reproduce the observed ¹H and ¹³C chemical shifts of the starting sulfides and their oxidation products. It has been shown that the determination of the energy‐minimized conformation is a very important condition for obtaining realistic data in the subsequent calculation of the NMR chemical shifts. The correlation between calculated and observed chemical shifts is very good for carbon atoms (even for the ‘cheap’ DFT B3LYP/6‐31G* method) and somewhat less satisfactory for hydrogen atoms. The calculated chemical shifts induced by oxidation (the Δδ values) agree even better with the experimental values and can also be used to determine the oxidation state of the sulfur atom (? S? , ? SO? , ? SO₂? ). Copyright © 2010 John Wiley & Sons, Ltd.     

NMR study of phthalide‐type poly(phenylene)s. Symmetry and additivity

All ¹H and ¹³C NMR signals of the four poly(phenylenephthalides): polydiphenylenephthalide ( P(DPh)‐1 ), polyterphenylenephthalide ( P(TPh)‐2 ) and two sequentially ordered polymers with different ratios of alternating diphenylenephthalide and terphenylenephthalide units ( P(DTPh)‐3, P(DDTPh)‐4 ) were assigned unequivocally with two‐dimensional NMR techniques (¹H–¹H COSY and NOESY; ¹H–¹³C HSQC and HMBC). There are four types of polyphenylene fragments: not symmetrical end, symmetrical inner, symmetrical pre‐end and formally symmetric pre‐end. The equivalent carbon atoms in these fragments have different chemical shifts. A full additivity of the chemical shifts for the side phthalide and polyphenylene carbon atoms was revealed. A new structure of diads with a mirror symmetry plane, passing through the middle of aromatic moieties, is proposed. Copyright © 2017 John Wiley & Sons, Ltd.     

Application of chemical shifts in 1H and 13C NMR spectra to configuration assignment of Schiff bases in the liquid phase

In ¹H and ¹³C NMR spectra of N-substituted dimethylketimines chemical shifts of protons and carbon atoms of the methyl groups in the cis-position with respect to the unshared electron pair of the nitrogen are larger than those of the CH₃ groups in the trans-position by 0.2–0.4 and 8–11 ppm respectively. This effect is accompanied by the reduction of the corresponding direct spin-spin coupling constant ¹³C-¹³C by 10 Hz. The experimental trends in the variation of the spectral parameters are well reproduced by ab initio quantum-chemical calculations. The discovered stereochemical dependence of the chemical shifts of ¹H and ¹³C may underlie a simple and efficient method of the configuration assignment in various compounds with a C=N bond.     

Carbon-13 nuclear magnetic resonance spectra of some mesoionic xanthine analogs

Natural abundance ¹³C NMR chemical shifts have been experimentally determined for a series of mesoionic thiazolo[3,2-a]pyrimidine-5,7-diones. The spectral data are compared with those of related mesoionic dihydrothiazolo[3,2-a]pyrimidine-5,7-diones and mesoionic 1,3,4-thiadiazolo[3,2-a]pyrimidine-5,7-diones. Resonable correlation between the observed ¹³C NMR chemical shifts and CNDO/2 total charge densities have been obtained for the different carbon atoms of 8-methylthiazolo[3,2-a]pyrimidine-5,7-dione.