Second-order perturbational treatment of normal coordinates in the string model for the hydration reaction of formaldehyde

A perturbation theory for normal coordinates of nonadiabatic solvation is presented by means of the “string model” of chemical reactions. The dynamic normal coordinate is introduced for the perturbational treatment of the “intrinsic” normal coordinates that are orthogonal to the reaction path. The reaction is defined as the intrinsic reaction coordinate (IRC ) that is treated as a string. The string is thrown in the external force field that acts as a nonadiabatic source of perturbation. As an application of the present treatment, the effect of a water molecule for hydration reaction of formaldehyde is calculated. A second-order perturbation effect for the enhancement of the reaction rate is found.     

反应类等键反应方法及类反应热动力学参数计算

本文提出了反应类等键反应方法,将通常用于热力学性质计算的等键反应方法推广用于类反应中反应势垒和反应焓变的计算. 对碳氢燃料低温燃烧反应机理中的一类重要反应类：?烷基自由基过氧化氢裂解生成烯烃和HO2自由基的反应势垒和反应焓变进行了计算. 通过对该类16个反应中的5个代表反应分别在不同计算水平HF、DFT、MP2、CCSD(T)的比较计算发现,采用等键反应方法可在较低从头算级别计算得到类反应较高精度的反应势垒,提高了计算的效率和精度. 本文采用反应类等键反应方法在B3LYP/6-311G(d,p)计算水平对该类16个反应进行了反应势垒和反应焓变的计算,并建立了反应势垒和反应能的线性自由能关系：delta V=71.02+0.41?delta E.     

Transition-metal-free Suzuki-type coupling reactions: scope and limitations of the methodology

The scope and limitations of the transition-metal-free Suzuki-type coupling of aryl halides and arylboronic acids to form biaryls are presented. Confirmation that the reaction is indeed metal-free is presented. The effects of changing base, solvent, reaction temperature, phase-transfer catalyst, and substrate are shown and the implications of these results discussed in terms of their impact on the synthetic versatility of the methodology. The main findings are that the reaction works well for aryl bromides, water is necessary as a solvent for the reaction, the optimum temperature for the reaction is 150 degrees C, the reaction is best performed by using microwave promotion with the exception of an electron-poor aryl bromide example where conventional heating may be used, only limited boronic acids can be used as coupling partners, sodium carbonate is the best base for the reaction, tetrabutylammonium bromide proves to be the best phase-transfer catalyst for the reaction, the reaction is limited to couplings between aryl halides and aryl boronic acids with sp(2)-sp(3) couplings proving ineffective, and NaBPh(4) can be used in the place of phenylboronic acid as a phenylating agent.     

Implicit versus explicit solvent in free energy calculations of enzyme catalysis: Methyl transfer catalyzed by catechol O-methyltransferase

We compare free energy calculations for the methyl transfer reaction catalyzed by catechol O-methyltransferase using the quantum mechanical/molecular mechanical free energy method with implicit and explicit solvents. An analogous methylation reaction in a solution is also studied. For the explicit solvent model, we use the three-point transferable intermolecular potential model, and for the implicit model, we use the generalized Born molecular volume model as implemented in CHARMM. We find that activation and reaction free energies calculated with the two models are very similar, despite some structural differences that exist. A significant change in the polarization of the environment occurs as the reaction proceeds. This is more pronounced for the reaction in a solution than for the enzymatic reaction. For the enzymatic reaction, most of the changes take place in the protein rather than in the solvent, and, hence, the benefit of having an instantaneous relaxation of the solvent degrees of freedom is less pronounced for the enzymatic reaction than for the reaction in a solution. This is a likely reason why energies of the enzyme reaction are less sensitive to the choice of atomic radii than are energies of the reaction in a solution.     

电化学反应及其腐蚀

氧化―还原反应是普遍存在的一类重要的反应。冶金、锈蚀及许多化工生产都涉及到氧化―还原反应。氧化―还原反应的本质是电子得失或偏移,如何通过化学能转变为电能,使氧化―还原反应获得或失去电子等,是化学教学中的重点和难点。文章介绍了氧化―还原反应中电化学的概念和原电池的原理,利用电化学的知识来解释一些电化学腐蚀现象。     

Application of competitive reaction systems to catalytic kinetic analysis-determination of phosphate

A technique is described for the determination of catalytically active substances, in which a slow catalysed reaction is coupled to a fast competitive reaction. One reactant, which at the same time serves as the indicator substance, is removed by the slow reaction as well as by the competitor added to the system from outside. Under suitable conditions the time for the complete removal of the indicator substance is dependent only on the rate of the catalysed reaction and consequently on the catalyst concentration. The technique is illustrated by means of the phosphate-catalysed reduction of Mo(VI) by ascorbic acid.     

An efficient protocol of iridium-catalyzed allylic substitution reaction and its application to polymer synthesis: complementary regio- and stereoselective allylation polycondensation via Ir and Pd catalyses

An efficient protocol of the Ir-catalyzed allylic substitution reaction is reported using N,O-bis(trimethylsilyl)acetamide as a base in the presence of nBu4NF as a cocatalyst. The reaction completely proceeded under very mild conditions, and a branched allylated compound that is not easy to access via the Tsuji-Trost reaction can be synthesized. The reaction system is practical enough to be applicable for polymer syntheses. The Ir- and Pd-catalyzed allylation polycondensations generally show complementary regio- and stereoselectivities. The Ir-catalyzed reaction is versatile, and a mixed dual regioselectivity such as a branched-linear selectivity on each electrophile can also be achieved.     

Oxidative arylation of isochroman

We report the use of a previously intractable nucleophile, anisole, in an oxidative "cross-dehydrogenative coupling" (CDC) reaction with the cyclic ether isochroman, as well as derivatives of both components. Metal catalysis was required for the reaction to proceed efficiently, and the reaction is highly sensitive to modification of either coupling partner but is able to produce a range of novel compounds via what is a synthetic alternative to the traditional oxa-Pictet-Spengler reaction.     

Sulpholane--A new solvent for the Baylis-Hillman reaction

Sulpholane, a commercially available solvent, is used for the first time as a new solvent for the Baylis-Hillman reaction under ambient conditions; a wide variety of olefins as well as aldehydes participate very efficiently resulting in good to excellent yields of products. Acrylamide also underwent the Baylis-Hillman reaction with 4-nitrobenzaldehyde under these reaction conditions.     

Cholesterol study: Reaction plateau and kinetic determinations

A study has been described of a comparison between reaction plateaus and kinetic modes for measuring cholesterol. A similar investigation of bilirubin reactions under the same procedural conditions was also carried out because this compound is a major interference which is frequently encountered in abnormal serums. The findings indicate that bilirubin is a more sensitive reactant than cholesterol by LB reaction but that its effect as an interference can be lessened by a kinetic approach providing that the effect of H₂O on reaction velocity and molar absorptivity can be minimized. An iron reaction even though more sensitive proved less workable in the kinetic mode owing to reaction velocity and the presence of air bubbles. However, its reaction plateau characteristics were superior to the LB reaction because of a favorable ratio of colors generated for the two reacting constituents. Based on this study, it is predictable that a kinetic approach is quite workable for the LB reaction and could be made more workable for the iron reaction if, in the latter case, conditions perhaps such as temperature and reaction media, could be altered to slow the rate of color formation.     

Controllable redox reaction of chemically purified DNA-single walled carbon nanotube hybrids with hydrogen peroxide

We report for the first time the controllable redox reaction of chemically purified ssDNA-HiPco SWNT hybrids with hydrogen peroxide. Compared with the suspensions before separation, the purified SWNT suspensions become inert with hydrogen peroxide which may serve as a platform for further chemical manipulation. In the presence of thiocyanate ions, the reaction of SWNTs with hydrogen peroxide is initiated and accelerated at the earlier reaction stage, accompanied with the near-infrared spectral suppression. At the later stage, the suppressed spectral intensity is recovered overtime. The thiocyanate ions may work as a mediator being able to control the reaction rate as well as the tunable properties of the reaction. The tunable redox reaction of SWNTs and H2O2 mediated by thiocyanate ions may offer a new sensing scheme for continuously monitoring H2O2 concentrations.     

Theory of diffusion-controlled reaction between non-simple molecules. I

A new vibrational principle is presented for reaction rates of diffusion-controlled chemical reaction. The variational principle is obtained by a modification of the closure approximation of Wilemski and Fixman. The closure approximation is found to correspond to a special choice of the trial function in this formation and to yield a lower bound of the reaction rate. This formulation is found to be especially useful for the analysis of reaction between non-simple molecules, such as macromolecules.     

Size-dependent catalytic behavior of platinum nanoparticles on the hexacyanoferrate(III)/thiosulfate redox reaction

Platinum nanoparticles prepared in reverse micelles have been used as catalysts for the electron transfer reaction between hexacyanoferrate(III) and thiosulfate ions. Nanoparticles of average diameter ranging between 10 and 80 nm have been used as catalysts. The kinetic study of the catalytic reaction showed that for a fixed mass of catalyst the catalytic rate did not increase proportionately to the decrease in particle size over the whole range from 10 to 80 nm. The maximum reaction rate has been observed for average particle diameter of about 38 nm. Particles below diameter 38 nm exhibit a trend of decreasing reaction rate with the decrease in particle size, while those above diameter 38 nm show a steady decline of reaction rate with increasing size. It has been postulated that in the case of particles of average size less than 38 nm diameter, a downward shift of Fermi level with a consequent increase of band gap energy takes place. As a result, the particles require more energy to pump electrons to the adsorbed ions for the electron transfer reaction. This leads to a reduced reaction rate catalyzed by smaller particles. On the other hand, for nanoparticles above diameter 38 nm, the change of Fermi level is not appreciable. These particles exhibit less surface area for adsorption as the particle size is increased. As a result, the catalytic efficiency of the particles is also decreased with increased particle size. The activation energies for the reaction catalyzed by platinum nanoparticles of diameters 12 and 30 nm are about 18 and 4.8 kJ/mol, respectively, indicating that the catalytic efficiency of 12-nm-diameter platinum particles is less than that of particles of diameter 30 nm. Extremely slow reaction rate of uncatalyzed reaction has been manifested through a larger activation energy of about 40 kJ/mol for the reaction.     

Theoretical study on the alkaline hydrolysis of methyl thioacetate in aqueous solution

A base-catalyzed hydrolysis reaction of thiolester has been studied in both gas and solution phases using two ab initio quantum mechanics calculations such as Gaussian09 and CPMD. The free-energy surface along the reaction path is also constructed using a configuration sampling technique, namely, the metadynamics method. While there are two different reaction paths obtained for the potential profile of the base-catalyzed hydrolysis reaction for thiolester in the gas phase, a triple-well reaction path is computed for the reaction in the solution phase by two quantum mechanics calculations. Unlike the S(N)2 mechanism (a concerted mechanism) found for the gas-phase reaction, a nucleophilic attack from the hydroxide ion on the carbonyl carbon to yield a tetrahedral intermediate (a stepwise mechanism) is observed for the solution-phase reaction. Moreover, the energy profiles computed by these two theoretical calculations are found to be very comparable with those determined experimentally.     

An Introduction to the Combustion of Carbon Materials

Combustion is arguably as old as homo sapiens ability to observe and use fire. Despite the long tradition of using carbon combustion for energy production, this reaction is still not fully understood. This can be related to several facts that are intertwined and complicate the investigation, such as the large variety of possible carbon structures, the actual surface structure, porosity, the solid-gas nature of this reaction, diffusion limitation and fundamental reaction steps. In this review, a brief history of carbon combustion science is given, followed by a detailed discussion of the most important aspects of carbon combustion. Special attention is given to limitations for example diffusion. In carbon combustion, kinetic control can rarely be observed. The literature of the fundamental reaction steps actually occurring on the carbon framework is reviewed and it becomes apparent that the reaction is occurring primarily on defects on the basal plane. Thus, the reaction between oxygen and carbon may be used as an analytical tool to provide further insights into novel materials, for example synthetic carbon materials, fibres and graphene type materials. Mastering the combustion reaction in all its complexity may prove to be very valuable in the future.     

Microwave Heating Outperforms Conventional Heating for a Thermal Reaction that Produces a Thermally Labile Product: Observations Consistent with Selective Microwave Heating

Microwave (MW) heating is more effective than conventional (CONV) heating for promoting a high‐temperature oxidative cycloisomerization reaction that was previously reported as a key step in a total synthesis of the natural product illudinine. The thermal reaction pathway as envisioned is an inverse electron‐demand dehydro‐Diels–Alder reaction with in situ oxidation to generate a substituted isoquinoline, which itself is unstable to the reaction conditions. Observed reaction yields were higher at a measured bulk temperature of 200 °C than at 180 °C or 220 °C; at 24 hours than at earlier or later time points; and when the reaction solution was heated using MW energy as opposed to CONV heating with a metal heat block. Selective MW heating of polar solute aggregates is postulated to explain these observations.     

Kinetics of phenol oxidation with ozone in a thin layer on a solid surface

Ozone has been reacted with phenol in thin supported layers, and the dynamics of this reaction has been investigated. The stoichiometry of this reaction coincides with the stoichiometry of the same reaction in solution. Specific reaction rate (β) has been determined for various phenol conversions. The effective rate constant of the reaction, estimated by extrapolating β to zero reaction time, is significantly higher than the rate constant of the reaction in solution. The reaction between ozone and phenol is diffusion-controlled. The reaction products form a barrier layer, which protects the deeper phenol layers against ozone. The barrier layer is as thick as 8–15 phenol monolayers.     

Pressure effects on Friedel-Crafts alkylation reactions in supercritical difluoromethane.

Dielectrometry is used as a novel technique for following the rate of a Friedel-Crafts alkylation reaction in supercritical (sc) difluoromethane. Although the process was not optimized, good product yields were obtained and reaction rates were found to be larger than in CO2 at comparable conditions. The reaction order is determined using the initial rate method and the reaction is shown to be first-order with respect to both anisole and t-butyl chloride. The reaction rate constant is unaffected by pressures above 120 bar but close to the critical pressure the value decreases with increasing pressure. It is also shown that the product distribution for the alkylation of anisole shows significant pressure dependence with substitution at the ortho-position being favored at lower pressures, which is ascribed to hydrogen bonding. This pressure dependency is not observed in sc CO2 or using toluene as a substrate, which supports the idea that hydrogen bonding may be important in the reaction mechanism. The effect of the different reagents and temperature on the rate of the alkylation reaction was also determined.     

活性酯固化邻甲酚环氧树脂反应机理的研究

采用交叉反应研究在促进剂2-甲基咪唑存在下活性酯固化邻甲酚环氧树脂的反 应机理，用傅立叶转换红外（FTIR）原位测量技术，NMR，气-质联用（GC-MS）等 手段研究了模型化合物的反应动力学，并提出了其反应机理。结果表明，在促进剂 2-甲基咪唑存在下活性酯固化邻甲酚环氧树脂的反应是通过分子内机理进行的。