Solvation of electrosprayed ions in the accumulation/collision hexapole of a hybrid Q-FTMS

In an effort to spectroscopically determine the structures of solvated ions composed of nucleic acid bases and amino acids, methods for their gas-phase synthesis have been studied. Ions were electrosprayed and solvated in the accumulation cell of a hybrid Q-FTICR filled with methanol or water vapor at ∼10⁻² bar. There were subsequently transferred to the FTICR cell at 10⁻¹⁰ mbar. Following their isolation in the FTICR, they can be investigated by studying their unimolecular blackbody infrared radiative dissociation (BIRD) or infrared multiple photon dissociation (IRMPD) spectroscopy. The IRMPD spectra for (Ade)₂Li⁺ and (Ade)₂Li(H₂O)⁺ are reported and compared as well as BIRD rate constants for multiply solvated and metalated adenine ions.     

Theoretical and experimental study of the structure and stability of multiply Na-substituted glucose and 2,4,6-trihydroxyacetophenone derivatives

The equilibrium geometric parameters and the energetic and spectroscopic characteristics of low lying conformers for series of polyhydroxyl molecules and ions in which sodium atoms are successively substituted for the hydroxyl hydrogen atoms have been calculated by the density functional theory B3LYP method with the 6−31G* and 6−311+G** basis sets. The glucose derivatives [Glu − nH + nNa] and [Glu − nH + (n + 1)Na]⁺ (n = 1−5) and the 2,4,6-trihydroxyacetophenone derivatives [THAP − nH + nNa] and [THAP − nH + (n + 1)Na]⁺ (n = 1−4) have been considered. The affinities of the neutral [Glu − nH + nNa] and [THAP − nH + nNa] molecules for adding Na⁺ cations, as well as the energies of successive substitution of Na atoms for H atoms in the Glu and THAP molecules and the Glu⁺ and THAP⁺ ions in their reaction with sodium acetate molecules, have been estimated. Computations show that the first substitution of Na for H in ions is slightly exothermic and, presumably, can spontaneously occur under common conditions. Further substitutions are endothermic, but the required energy inputs are small. Therefore, successive substitutions for two, three, or more hydroxyl H atoms in the molecules and ions under consideration are possible at relatively low energy inputs. The computation results and conclusions are compared with the MALDI TOF mass spectral data for Na-substituted glucose and 2,4,6-trihydroxyacetophenone derivatives in the [glucose + CH₃COONa + THAP] system where, in addition to common Glu · Na⁺ and THAP · Na⁺ ion-molecular complexes, multiply substituted positive ions of the [Glu − nH + (n + 1)Na]⁺ (n = 1−4) and [THAP − nH + (n + 1)Na]⁺ (n = 1−3) type have been identified.     

Cage Structure Formation of Singly Doped Aluminum Cluster Cations Al<Subscript><Emphasis Type="BoldItalic">n</Emphasis></Subscript><Emphasis Type="BoldItalic">TM</Emphasis><Superscript>+</Superscript> (<Emphasis Type="BoldItalic">TM</Emphasis> = Ti,V, Cr)

Structural information on free transition metal doped aluminum clusters, Al _n TM ⁺ (TM = Ti, V, Cr), was obtained by studying their ability for argon physisorption. Systematic size (n = 5 – 35) and temperature (T = 145 – 300 K) dependent investigations reveal that bare Al _n ⁺ clusters are inert toward argon, while Al _n TM ⁺ clusters attach one argon atom up to a critical cluster size. This size is interpreted as the geometrical transition from surface-located dopant atoms to endohedrally doped aluminum clusters with the transition metal atom residing in an aluminum cage. The critical size, n _crit , is found to be surprisingly large, namely n _crit = 16 and n _crit = 19 – 21 for TM = V, Cr, and TM = Ti, respectively. Experimental cluster–argon bond dissociation energies have been derived as function of cluster size from equilibrium mass spectra and are in the 0.1–0.3 eV range.     

Geometrical structures and possible dissociation channels of MnP n + (n = 2–8) binary cluster ions

An all-electron (AE) calculation on the geometrical structures and possible dissociation channels of MnP _n ⁺ (n = 2–8) cluster ions has been performed by using density functional theory with the generalized gradient approximation (GGA) at PW91 level. The lowest energy structures of MnP _n ⁺ (n = 2–8) cluster ions may be regarded as the outcome of bonding between Mn atom and one or two units of P₂, P₃, and P₄. The most possible dissociation channels of MnP _n ⁺ (n = 2–8) cluster ions are the detachment of P₂, P₃, or P₄ unit. These conclusions are basically consistent well with previous works in which the P₂ and P₄ structures are regarded as two relatively stable units and easy to be stripped.     

Resonance capture of electrons by cyclopentadienyltricarbonylmanganese and -rhenium derivatives

Negative ion mass spectra of cyclopentadienyltricarbonylmanganese and-rhenium derivatives RC₅H₄M(CO)₃ (R=H, CN, COOH, COMe, COOMe, CH₂OH, CHO; M=Mn, Re) were studied. The subsequent detachment of carbonyl groups is the main process of the fragmentation of these compounds under the conditions of the resonance capture of electrons. On going fron the rhenium complexes to manganese derivatives, the maxima of the yields of the ions [M-nCO]⁻ (n=1–3) shift to the lower energy region indicating that the stability of the Re−CO bond is higher than that of Mn−CO. The average lifetimes of the molecular negative ions relative to the autodetachment of an electron (τ_a) and to dissociation (τ_d) were measured. It was found that electron-accepting substituents increase the τ_a value and decrease τ_d. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 6, pp. 1161–1164, June, 1997.     

Geometrical structures and dissociation channels of MP<Subscript><Emphasis Type="Italic">n</Emphasis></Subscript><Superscript>+</Superscript> (M = Fe,Co or Ni; <Emphasis Type="Italic">n</Emphasis> = 2, 4, 6 or 8) binary cluster ions

A density functional theory study on the geometrical structures and dissociation channels of MP _n ⁺ (M = Fe, Co or Ni; n = 2, 4, 6 or 8) binary cluster ions has been performed. The tetrahedral P₄ structure and linear P₂ structure are found to be two relatively stable units in these ions. The lowest energy structures of MP _n ⁺ cluster ions are constructed by bonding a twofold or fourfold M atom with a P₄ or P₂ unit. The M–P bond is clearly weaker than the P–P bond. The most likely dissociation channel of the MP _n ⁺ cluster ions is the detachment of a P₄ or P₂ fragment. This conclusion is well consistent with the published experimental data and consistent with our previously reported theoretical study on the CrP _m ⁺ (m = 2, 4, 6 or 8) cluster ions.     

Competition between reactivity and relaxation in free electron attachment to molecules

The reactivity of the C₆F₅X (X=F, Cl, Br, I) molecules following low energy (0–15 eV) electron attachment is studied in the gas phase under single collision conditions, free molecular clusters and condensed molecules by means of crossed beams and surface experiments. All four molecules exhibit a very prominent resonance for low energy electron attachment (<1 eV, attachment cross section >10⁻¹⁴ cm²). Under collision free conditions thermal electron capture generates long lived molecular parent anions C₆F₅X^−*. Along the line Cl, Br, I dissociation into X⁻+C₆F₅ and X+C₆F₅-increasingly competes until for X=1 only chemical fragmentation is observed on the mass spectrometric time scale. In free molecular clusters chemical fragmentation is quantitatively quenched at low energies in favour of associative attachment yielding undissociated, relaxed ions (C₆F₅X)⁻ _n,n≥1. A further dissociative resonance at 6.5 eV in C₆F₅Cl is considerably enhanched in clusters. If these molecules are finally condensed on a solid surface, one observes a prominent Cl⁻ desorption resonance at 6.5 eV. While the quantitative quenching of the chemical reactivity at low energies is due to the additional possibilities of energy dissipation under aggregation, the enhanched reactivity at 6.5 eV is interpreted by the conversion of a core excited open channel resonance in single molecules into a closed channel (Feshbach) resonance when it is coupled to environmental molecules.     

Analysis of fragmentation data and molecular orbital calculations of small argon ion clusters

Distributions of argon clusters (Ar _n ⁺ wheren=1–27) obtained in a molecular beam/time-of-flight system were analyzed in order to assess the influence of fragmentation. The results from rudimentary pseudopotential molecular calculations were calculated to predict the most stable structures and stabilities for the smaller argon ion sized clusters (Ar _n ⁺ wheren=3−9).     

Theoretical studies on anionic clusters of sulfate anions and carbon dioxide, SO 4?1/?2 (CO2)n, n?=?1?4

Geometry optimizations were performed on monoanionic and dianionic clusters of sulfate anions with carbon dioxide, SO₄^−1/−2(CO₂) _n , for n = 1–4, using the B3PW91 density functional method with the 6-311 + G(3df) basis set. Limited calculations were carried out with the CCSD(T) and MP2 methods. Binding energies, as well as adiabatic and vertical electron detachment energies, were calculated. No covalent bonding is seen for monoanionic clusters, with O₃SO–CO₂ bond distances between 2.8 and 3.0 ?. Dianionic clusters show covalent bonding of type [O₃S–O–CO₂]⁻², [O₃S–O–C(O)O–CO₂]⁻², and [O₂C–O–S(O₂)–O–CO₂]⁻², where one or two oxygens of SO₄⁻² are shared with CO₂. Starting with n = 2, the dianionic clusters become adiabatically more stable than the corresponding monoanionic ones. Comparison with SO₄^−1/−2(SO₂) _n and CO₃^−1/−2(SO₂) _n clusters, the binding energies are smaller for the present SO₄^−1/−2(CO₂) _n systems, while stabilization of the dianion occurs at n = 2 for both SO₄⁻²(CO₂) _n and SO₄⁻²(SO₂) _n , but only at n = 3 for CO₃⁻²(SO₂) _n .     

Self‐Assembled Multimetallic/Peptide Complexes: Structures and Unimolecular Reactions of [Mn(GlyGly−H)2n−1]+ and Mn+1(GlyGly−H2n]2+ Clusters in the Gas Phase

The unimolecular chemistry and structures of self‐assembled complexes containing multiple alkaline‐earth‐metal dications and deprotonated GlyGly ligands are investigated. Singly and doubly charged ions [M_n(GlyGly?H)_n‐1]⁺ (n=2–4), [M_n+1(GlyGly?H)_2n]²⁺ (n=2,4,6), and [M(GlyGly?H)GlyGly]⁺ were observed. The losses of 132 Da (GlyGly) and 57 Da (determined to be aminoketene) were the major dissociation pathways for singly charged ions. Doubly charged Mg²⁺ clusters mainly lost GlyGly, whereas those containing Ca²⁺ or Sr²⁺ also underwent charge separation. Except for charge separation, no loss of metal cations was observed. Infrared multiple photon dissociation spectra were the most consistent with the computed IR spectra for the lowest energy structures, in which deprotonation occurs at the carboxyl acid groups and all amide and carboxylate oxygen atoms are complexed to the metal cations. The N?H stretch band, observed at 3350 cm^?1, is indicative of hydrogen bonding between the amine nitrogen atoms and the amide hydrogen atom. This study represents the first into large self‐assembled multimetallic complexes bound by peptide ligands.     

Gas phase structure of micro-hydrated [Mn(ClO<Subscript>4</Subscript>)]<Superscript>+</Superscript> and [Mn<Subscript>2</Subscript>(ClO<Subscript>4</Subscript>)<Subscript>3</Subscript>]<Superscript>+</Superscript> ions probed by infrared spectroscopy

Gas-phase infrared photodissociation spectroscopy is reported for the microsolvated [Mn(ClO₄)(H₂O) _n ]⁺ and [Mn₂(ClO₄)₃(H₂O) _n ]⁺ complexes from n = 2 to 5. Electrosprayed ions are isolated in an ion-trap where they are photodissociated. The 2600–3800 cm⁻¹ spectral region associated with the OH stretching mode is scanned with a relatively low-power infrared table-top laser, which is used in combination with a CO₂ laser to enhance the photofragmentation yield of these strongly bound ions. Hydrogen bonding is evidenced by a relatively broad band red-shifted from the free OH region. Band assignment based on quantum chemical calculations suggest that there is formation of water—perchlorate hydrogen bond within the first coordination shell of high-spin Mn(II). Although the observed spectral features are also compatible with the formation of structures with double-acceptor water in the second shell, these structures are found relatively high in energy compared with structures with all water directly bound to manganese. Using the highly intense IR beam of the free electron laser CLIO in the 800–1700 cm⁻¹, we were also able to characterize the coordination mode (η²) of perchlorate for two clusters. The comparison of experimental and calculated spectra suggests that the perchlorate Cl—O stretches are unexpectedly underestimated at the B3LYP level, while they are correctly described at the MP2 level allowing for spectral assignment.     

Trends in the formation of aggregates and crystals from M@Si<Subscript>16</Subscript> clusters: a study from first principle calculations

We have shown recently that the ground state and low-lying energy isomers of the endohedral M@Si₁₆ clusters (M = Sc⁻, Ti, V⁺) have a nearly spherical cage-like symmetry with a closed shell electronic structure which conforms them as exceptional stable entities. This is manifested, among other properties, by a large Homo–Lumo gap about 2 eV which suggest the possibility of using these clusters as basic units (superatoms) to construct optoelectronic materials. As a first step in that direction, we have studied in this work, by means of first principles calculations, the trends in the formation of [Ti@Si₁₆] _n , [Sc@Si₁₆K] _n , and [V@Si₁₆F] _n aggregates as their size increases, going from linear to planar to three dimensional arrangements. The most favorable configurations for n ≥ 2 are those formed from the fullerene-like D_4d isomer of M@Si₁₆, instead of the ground state Frank–Kasper T _d structure of the isolated M@Si₁₆ unit, joined by Si–Si bonds between the Si atoms of the square faces. In all cases the Homo–Lumo gap for the most favorable structure decrease with the size n. Trends for the binding energy, dipole moment, and other electronic properties are also discussed. Several crystal structures constructed from these superatom, supermolecules, and aggregates have been tested and preliminary results are summarily commented.     

Deuterium Clusters D N and Mixed K–D and D–H Clusters of Rydberg Matter: High Temperatures and Strong Coupling to Ultra-Dense Deuterium

Ultra-dense deuterium D(−1) can be formed by a catalytic process from Rydberg Matter (RM) of deuterium as reported previously. Laser-induced inertial confinement fusion (ICF) has recently been observed in this material. The formation of D(−1) is now studied through experiments observing the deuterium RM clusters D _N in excitation levels n _B  = 1, 3 and 4. These levels are intermediate in the formation process of D(−1). Laser-induced fragmentation is used, with neutral time-of-flight (TOF) and TOF–MS measurements of the kinetic energy release (KER) from the quantized Coulomb explosions (CE). Several types of pure D _N clusters, mixed clusters containing both D and H atoms, and clusters containing both D and K atoms are identified. The large planar RM clusters which are common for H and K are less common for D. The neutral D _N clusters are small and have high kinetic temperature, typically at 100 K instead of 10 K for K _N and H _N . Large D _N ⁺ clusters are only observed when an electric field is applied, probably stabilized by increased cooling. A strong coupling of the D(1) laser fragmentation signal to the ultra-dense D(−1) signal is observed, and the materials D(1) and D(−1) are two rapidly interchangeable forms of quantum fluids.     

Relationships between cluster secondary ion mass intensities generated by different cluster primary ions

Measurements are described to evaluate the constitution of secondary ion mass spectra for both monatomic and cluster primary ions. Previous work shows that spectra for different primary ions may be accurately described as the product of three material-dependent component spectra, two being raised to increasing powers as the cluster size increases. That work was for an organic material and, here, this is extended to (SiO₂) _t OH⁻ clusters from silicon oxide sputtered by 25 keV Bi _n ⁺ cluster primary ions for n = 1, 3, and 5 and 1 ≤ t ≤ 15. These results are described to a standard deviation of 2.4% over 6 decades of intensity by the product of a constant with a spectrum, H _SiOH/*, and a power law spectrum in t. This evaluation is extended, using published data for Si _t ⁺ sputtered from Si by 9 and 18 keV Au⁻ and Au₃⁻, with confirmation that the spectra are closely described by the product of a constant with a spectrum, H _Si^*, and a simple spectrum that is an exponential dependence on t, both being raised to appropriate powers. This is confirmed with further published data for 6, 9, 12, and 18 keV Al⁻ and Al₂⁻ primary cluster ions. In all cases, the major effect of intensity is then related to the deposited energy of the primary ion at the surface. The constitution of SIMS spectra, for monatomic and cluster primary ion sources, is shown, in all cases, to be consistent with the product of a constant with two component spectra raised to given powers.     

Further correlations between fragment ion intensity and critical energy. Unimolecular covalent bond fragmentation

A correlation of fragment ion intensity with critical energy found in the collisional activation spectra of [C₄Ph]⁺˙ ions produced by electron impact can also be found in the unimolecular mass-analysed ion kinetic energy spectra of these ions. The P(E) functions of the unimolecular and collisionally activated ions should differ not only in width but also in structure and therefore, the hypothesis that P(E) functions do not have an important effect on these correlations is tested successfully.     

phosphate hydrate complexes of singly and doubly charged magnesium ions: Structure,energies, and spin states

For mixed magnesium phosphate hydrate complexes containing Mg²⁺ and Mg⁺ cations and HPO₄²⁻, HPO₄⁻, and H₂P₂O₇²⁻ anions, theoretical analysis of the electronic structure and energies has been performed at the model level in order to predict the actual role of these systems in various reactions that occur in the catalytic sites of ATP synthesizing enzymes. The calculations (DFT/B3LYP, MP2 with the 6–31G* basis set) of isolated aqua complexes Mg(H₂O) _n ^p (n = 1−6, p = 0, +1, +2) show that their relative stability monotonically increases with increasing n in each series and sharply decreases at a given n in going from the charged systems of Mg²⁺ (4–16 eV) and Mg⁺ (2–7 eV) to the neutral systems of Mg (<2 eV). An even higher stability is predicted for mixed magnesium complexes. The energies of fragmentation of mixed Mg²⁺ complexes into singlet phosphate and Mg²⁺-containing fragments at n = 0–4 are within 6–27 eV, and the energies of fragmentation into the corresponding radical ions are within 3–10 eV; for the Mg⁺ complexes, the fragmentation energies are also high (6–14 eV). The reasons for the enhanced stability of the complexes of both types have been analyzed with allowance for the predicted specific features of the electron density redistribution upon complex formation. Typical changes in the geometry of the P- and Mg-containing fragments caused by formation of mixed complexes have been discussed in the framework of the vibronic model of heteroligand systems. The high stability of all mixed magnesium complexes relative to various fragmentation products presumably rules out any dissociative processes in them in the course of ATP synthesis with the participation of phosphorylating enzymes.     

Adsorption of Cu(II), Cd(II), Pb(II), Cr(VI) by double hydroxides on the basis of Al oxide and Zr, Sn, and Ti oxides

It was studied the equilibrium adsorption and adsorption kinetics of Cu(II), Cd(II), Pb(II), and Cr(VI) by composite hydroxides formed by Me _x O _y · nH₂O and Me_0.4–0.7Al_0.6–0.3O _y · nH₂O, where Me = Zr, Sn and Ti. It was estimated the values of the diffusion coefficients of adsorbed ions Cu(II) and Cr(VI) from kinetic values. It was established that the estimated diffusion coefficients of adsorbed ions Cu(II) are in the range 0.4 × 10⁻¹²–2.5 × 10⁻¹² m²/s for individual hydroxides and 1.2 × 10⁻¹²–2.8 × 10⁻¹² m²/s for double hydroxides. The obtained values of diffusion coefficients Cr (VI) for double hydroxides are 0.1 × 10⁻¹⁰–0.4 × 10⁻¹⁰ m²/s.     

Another Approach to the Modified Zhuravlev Equation on the Basis of the Oxidation of V2O4 and V6O13

It has been found that the modified Zhuravlev equation, [(1−α)^−1/3−1]²=ktⁿ, which describes the kinetics of oxidation of V₂O₄ and V₆O₁₃ in the temperature range 820–900 K and in the oxygen pressure range 1.0–20 kPa, can be derived via the assumption that the changes in the observed activation energy result from the changing contributions of the two diffusion processes controlling the reaction rate. The values of the observed activation energy are in the range 160–175 kJ mol⁻¹ for V₂O₄ and 188–201 kJ mol⁻¹ for V₆O₁₃ in the scope of the experimental oxygen pressures and temperatures and conversion degrees of 0.1–0.9. This revised version was published online in August 2006 with corrections to the Cover Date.     

Kinetics and mechanism of thermal polymerization of hexafluoropropylene under high pressures

The basic kinetic parameters of thermal polymerization of hexafluoropropylene, namely, general rate constants, degree of polymerization, and their temperature and pressure dependences in the range of 230–290 °C and 2–12 kbar (200–1200 MPa) were determined. The activation energy (E _act = 132±4 kJ mol⁻¹) and activation volume (ΔV ₀ ^≠ = −27±1 cm³ mol⁻¹) were calculated. The activation energy of thermal initiation of polymerization was estimated. The reaction scheme based on the assumption about a biradical mechanism of polymerization initiation was proposed.     

Chromium(III) complexes with lutidinic acid: kinetic studies in HClO<Subscript>4</Subscript> and NaOH solutions

Chromium(III)-lutidinato complexes of general formula [Cr(lutH) _n (H₂O)_6−2n ]³⁻ⁿ (where lutH⁻ is N,O-bonded lutidinic acid anion) were obtained and characterized in solution. Acid-catalysed aquation of [Cr(lutH)₃]⁰ leads to only one ligand dissociation, whereas base hydrolysis produces chromates(III) as a result of subsequent ligand liberation steps. The kinetics of the first ligand dissociation were studied spectrophotometrically, within the 0.1–1.0 M HClO₄ and 0.4–1.0 M NaOH range. In acidic media, two reaction stages, the chelate-ring opening and the ligand dissociation, were characterized. The dependencies of pseudo-first-order rate constants on [H⁺] are as follows: k _obs1 = k ₁ + k ₋₁/K ₁[H⁺] and k _obs2 = k ₂ K ₂[H⁺]/(1 + K ₂[H⁺]), where k ₁ and k ₂ are the rate constants for the chelate-ring opening and the ligand dissociation, respectively, k ₋₁ is the rate constant for the chelate-ring closure, and K ₁ and K ₂ are the protonation constants of the pyridine nitrogen atom and coordinated 2-carboxylate group in the one-end bonded intermediate, respectively. In alkaline media, the rate constant for the first ligand dissociation depends on [OH⁻]: k _obs1 = k _OH(1) + k _O[OH⁻], where k _OH(1) and k _O are rate constants of the first ligand liberation from the hydroxo- and oxo-forms of the intermediate, respectively, and K ₂ is an equilibrium constant between these two protolytic forms. Kinetic parameters were determined and a mechanism for the first ligand dissociation is proposed. The kinetics of the ligand liberation from [Cr(lut)(OH)₄]³⁻ were also studied and the values of the pseudo-first-order rate constants are [OH⁻] independent.