A theoretical study of the formation of phosphaacetylene by thermolysis of triallylphosphine

A theoretical study of the decomposition of triallylphosphine into phosphaacetylene at the B3LYP/6-311++G(3df,2p) level has shown that the most likely mechanism involves two retroene eliminations of propene leading to vinylphosphaacetylene. Two mechanisms can account for the formation of HCP from vinylphosphaacetylene, either by a 1,2 or a 1,3 hydrogen shift. The first pathway was found to be the most favored kinetically. It is quite similar to the pathway proposed for the thermal decomposition of vinylacetylene into acetylene in the shock tube.     

Structure and stability of the [TCNE](2)(2-) dimers in dichloromethane solution: a computational study

The solution behavior of [TCNE](.-), which forms long-living pi-[TCNE]22- dimers, is computationally studied by B3LYP and MCQDPT/CASSCF(2,2) calculations (a multiconfigurational quasi-degenerate perturbative calculation using a CASSCF(2,2) wavefunction, which properly accounts for the dispersion interaction). B3LYP calculations indicate minimum-energy [TCNE](2)(2-)(dichloromethane)(4) aggregates, a solvent where pi-[TCNE](2)(2-) dimers are spectroscopically observed. Their existence is attributed to [TCNE](.-)...solvent interactions that exceed the [TCNE](.-)...[TCNE](.-) repulsion. The lowest energy minimum at the B3LYP level corresponds to an open-shell singlet electronic structure, a metastable minimum where the shortest interanion C...C distance is 5.23 A. A slightly less stable minimum is also found for the closed-shell singlet when double-occupancy of the orbitals is imposed, but it converts into the open-shell singlet minimum when the double occupancy is relaxed. At the MCQDPT/CASSCF(2,2) level, the only minimum is for the closed-shell singlet (24.0 kcal/mol (101 kJ/mol) more stable than the dissociation products), consistent with experimental enthalpy of dimerization of [TCNE](.-) in dichloromethane solutions. It has an interanion C...C distance of 2.75 A and is in accord with the UV-vis experimental properties of the [TCNE](.-) solutions.     

On the behavior of alpha,beta-unsaturated thioaldehydes and thioketones in the Diels-Alder reaction

Alpha,beta-unsaturated thioaldehydes and thioketones, R1CH=CH-C(=S)R2, are prepared in situ by the reaction between the corresponding carbonyl compounds and bis(dimethylaluminum) sulfide. These compounds undergo [4 + 2] self-dimerization reactions in which one molecule serves as the heterodiene component and the other as the dienophile to afford different types of dimeric products depending on the R1 and R2: 1,2-dithiin and 1,3-dithiin (R1 = R2 = H), 1,2-dithiin (R1 = Ph, R2 = H, CH3), or dihydrothiopyran (R1 = R2 = Ph). These differences in selectivity are explained on the basis of the relative energies evaluated by molecular orbital (MO) calculations at the DFT (density functional theory) level. The calculations show that in the dimerization reaction of thioacrolein (I), the head-to-tail (S-C-S bonded) dimers are kinetically more stable by about 5 kcal/mol but slightly thermodynamically unstable by about 2 kcal/mol than the head-to-head (S-S bonded) dimers. The calculations on thiocinnamaldehyde (IV) indicate that the dimerization reactions of phenyl-substituted alpha,beta-unsaturated thioaldehydes and thioketones are almost equally controlled by thermodynamic and kinetic factors. These unsaturated thiocarbonyl compounds also function as heterodienes (C=C-C=S) in the cycloaddition reaction with norbornadiene and as dienophiles (C=S) in the reaction with cyclopentadiene.     

A computational study of H2 dissociation on silver surfaces: the effect of oxygen in the added row structure of Ag110

We studied computationally the activation of H(2) on clean planar (111), (110) and stepped (221) as well as oxygen pre-covered silver surfaces using a density functional slab model approach. In line with previous data we determined clean silver to be inert towards H(2) dissociation, both thermodynamically and kinetically. The reaction is endothermic by approximately 40 kJ mol(-1) and exhibits high activation energies of approximately 125 kJ mol(-1). However, oxygen on the surface, modeled by the reconstructed surface p(2 x 1)O/Ag(110) that exhibits -O-Ag-O- added rows, renders H(2) dissociation clearly exothermic and kinetically feasible. The reaction was calculated to proceed in two steps: first the H-H bond is broken at an Ag-O pair with an activation barrier E(a) approximately 70 kJ mol(-1), then the H atom bound at an Ag center migrates to a neighboring O center with E(a) approximately 12 kJ mol(-1).     

Conformational properties of cyanomethoxy calix[4]arenes

O-Alkylation of the dinitro calix[4]arene 2, easily available by selective ipso-nitration of the di-cyanomethyl ether 1, with allylbromide (DMF/Cs2CO3) gave tetraethers 3 and 4 with anti- and syn-orientations of the two allyl ether residues. The two possible stereoisomers of in the partial cone and 1,2-alternate conformation exist as an equilibrium mixture which could be quantitatively analysed by 1H NMR spectroscopy. The temperature dependence of this equilibrium leads to deltaH0 = -7.6 to -9.7 kJ mol(-1) in different solvents (tetrachloroethane, benzene, dimethylsulfoxide). Since 3(1,2-alt) could be obtained in pure form, its isomerisation to the equilibrium mixture with 3(paco) could be followed also kinetically. An activation energy of E(a) = 110.5 kJ mol(-1) was found for this reaction in DMSO-d6. The results were confirmed by similar studies with tetraethers 5 and 6 obtained by O-allylation of 1, although exact thermodynamic and kinetic studies were not possible in this case, since the NMR signals of the respective isomers were strongly overlapping. Single crystal X-ray structures were obtained for 2, 3(1,2-alt), 4(paco) and 5(1,2-alt).     

1,1,2,2-四甲基-1,2-二氯二硅烷裂解机理的研究

利用量子化学知识对典型的二硅烷高沸物1,1,2,2-四甲基-1,2-二氯二硅烷的裂解机理进行理论研究。结果表明,在无催化剂和常温常压下,1,1,2,2-四甲基-1,2-二氯二硅烷以CHCl3作为裂解气的反应分为两步进行,均为放热反应,其速控步第一步的正反应活化能为352.949kJ/mol。     

Facile ketene-ketene and ketene-ketenimine rearrangements: a study of the 1,3-migration of alpha-substituents interconverting alpha-imidoylketenes and alpha-oxoketenimines, a pseudopericyclic reaction

Theoretical calculations (B3LYP/6-311+G(3df,2p)//B3LYP/6-31G) of the 1,3 migration of NR(2) transforming alpha-oxoketenimines 1 to alpha-imidoylketenes 3 and vice versa indicate that this process is a pseudo-pericyclic reaction with a low activation energy (NH(2) 97 kJ mol(-1), N(CH3)(2) 62 kJ mol(-1)). The oxoketenimines were found to be more stable (by 18-35 kJ mol(-1)) which is in line with experimental observations. The hindered amine rotation in the amide and amidine moieties adjacent to the cumulenes are important in the migration of the NR(2) group, as one of the rotation transition states is close to the 1,3 migration pathway. This gives an interesting potential energy surface with a valley-ridge inflection (VRI) between the orthogonal hindered amine rotation and 1,3 migration transition states. The imidoylketene may also undergo ring closure to an azetinone 5; however, this is metastable, and under the conditions that allow the 1,3-migration, the oxoketenimine 1 will be favored. The imine NH E/Z-interconversion of the ketenimine group takes place by inversion and has a low activation barrier ( approximately 40 kJ mol(-1)). In all the amidines examined the E/Z-interconversion of the imine function was predicted to be by rotation with a high barrier (>80 kJ mol(-1)), in contrast to all other reported imine E/Z-interconversions which are by inversion.     

AM1法研究乙烯与环己－1，3－二烯热加成反应

用ＡＭ１方法（采用非限制的Ｈａｒｔｒｅｅ－ＦｏｃｋＵＨＦ计算）研究乙烯与环己－１，３－二烯的热Ｄｉｅｌｓ－Ａｌｄｅｒ反应。结果表明反应是放热的且存在两条竞争的路径；协同反应的活化能以及双自由反应速度控制步骤的活化能分别为１１２．６６７ｋＪ／ｍｏｌ和７８．４０６ｋＪ／ｍｏｌ。     

二氯丙醇环化制备环氧氨丙烷的工艺及动力学研究

考察了各种因素对二氯丙醇环化反应的影响,以及无机盐NaCI的存在对粗环氧氯丙烷（ECH）溶液浓度的影响。建立了环化反应的动力学模型并验证了其正确性,得到了二氯丙醇环化反应的动力学参数。结果表明,二氯丙醇环化的最佳反应条件为：二氯丙醇与NaOH的摩尔比为1：1．2,环化温度为75℃、反应时间为90s。二氯丙醇环化反应为二级反应,1,2-二氯丙醇和1,3-二氯丙醇环化反应的活化能分别是94．19kJ／mol和92．23kJ／mol。     

酸性分子筛催化乙烯二聚反应

应用密度泛函理论(DFT), 采用5T簇模型来模拟分子筛催化剂的酸性位, 在B3LYP/6-311+G(3df, 2p)的条件下通过理论计算研究了乙烯在酸性分子筛上的二聚反应. 对反应各驻点进行了全局优化, 经过零点能校正后, 计算得出乙烯二聚反应的活化能. 研究表明, 乙烯在分子筛上的二聚反应分三步进行: 单个乙烯分子化学吸附→第二个乙烯分子的物理吸附→两乙烯分子二聚反应. 乙烯化学吸附生成的烷氧化合物与物理吸附的乙烯分子发生二聚反应生成新的C—C键同时生成新的烷氧化合物. 计算得到的乙烯化学吸附和二聚反应的反应能垒分别为108和149 kJ·mol-1. 反应的逆过程也就是1-丁烯在酸性分子筛表面的1-丁基烷氧化合物发生β分裂反应, 计算所得相应的1-丁烯β分裂反应的能垒为217 kJ·mol-1, 远高于相应的乙烯二聚反应能垒. 此外还进一步研究了所用基组对计算结果的影响.     

Insight into enzymatic C-F bond formation from QM and QM/MM calculations

The C-F bond-forming step in the fluorinase, the only native fluorination enzyme characterized to date, has been studied. The enzyme catalyzes the reaction between S-adenosyl-L-methionine (SAM) and fluoride ions to form 5'-fluoro-5'-deoxyadenosine (5'-FDA) and L-methionine. To obtain an insight into the mechanism of this unusual enzymatic reaction and to elucidate the role of the enzyme in catalysis, we have explored the conformational energetics of SAM and the intrinsic reactivity patterns of SAM and fluoride with DFT (BP86) and continuum solvent methods, before investigating the full enzymatic system with combined DFT/CHARMM calculations. We find that the enzymatic reaction follows an S(N)2 reaction mechanism, concurring with the intrinsic reactivity preferences in solution. The formation of sulfur ylides is thermodynamically strongly disfavored, and an alternative elimination-addition mechanism involving the concerted anti-Markovnikov addition of HF to an enol ether is energetically viable, but kinetically prohibitive. The S(N)2 activation energy is 92 (112) kJ mol(-)(1) in solution, but only 53 (63) kJ mol(-1) in the enzyme, and the reaction energy in the enzyme is -25 (-34) kJ mol(-1) (values in parentheses are B3LYP single-point energies). The fluorinase thus lowers the barrier for C-F bond formation by 39 (49) kJ mol(-)(1). A decomposition analysis shows that the major role of the enzyme is in the preparation and positioning of the substrates.     

Intramolecular homolytic translocation chemistry: an ab initio study of 1,n-silyl, germyl, and stannyl group transfer and related ring-closure reactions

Ab initio calculations using 6-311G**, cc-pVDZ, aug-cc-pVDZ, and a (valence) double-zeta pseudopotential (DZP) basis set, with (MP2, QCISD, CCSD(T)) and without (UHF) the inclusion of electron correlation, and density functional methods (B3LYP) predict that 1,n-homolytic transfers (n = 1-5) of silyl, germyl, and stannyl groups from group IV heteroatoms to carbon radicals can proceed via a frontside attack mechanism. At the B3LYP/DZP level of theory, energy barriers (DeltaE++) of 101.2, 98.8, 58.9, and 63.4 kJ/mol are calculated for the 1,2-, 1,3-, 1,4-, and 1,5-translocation reactions, respectively, of SiH3 between silicon atoms. Similar results are obtained for reactions involving germanium and tin with energy barriers (DeltaE++) of 85.9-113.1, 84.4-109.0, 41.7-73.3, and 48.5-78.2 kJ/mol for the 1,2-, 1,3-, 1,4-, and 1,5-translocation reactions, respectively. This study also predicts that four- and five-membered ring-closure reactions can be competitive with the 1,4- and 1,5-translocation reactions. These results suggest that while 1,2- and 1,3-translocation four-membered ring-formation reactions are unlikely to be synthetically viable, 1,4- and 1,5-transfers and five-membered ring-formation have synthetic possibilities.     

Di-tert-butyldiphosphatetrahedrane as a Source of 1,2-Diphosphacyclobutadiene Ligands

Reactions of di-tert-butyldiphosphatetrahedrane ( 1 ) with cycloocta-1,5-diene- or anthracene-stabilised metalate anions of iron and cobalt consistently afford complexes of the rarely encountered 1,2-diphosphacyclobutadiene ligand, which have previously been very challenging synthetic targets. The subsequent reactivity of 1,2-diphosphacyclobutadiene cobaltates toward various electrophiles has also been investigated and is compared to reactions of related 1,3-diphosphacyclobutadiene complexes. The results highlight the distinct reactivity of such isomeric species, showing that the 1,2-isomers can act as precursors for previously unknown triphospholium ligands. The electronic structures of the new complexes were investigated by several methods, including NMR, EPR and Mößbauer spectroscopies as well as quantum chemical calculations.     

Investigation of ethylene dimerization over faujasite zeolite by the ONIOM method.

Ethylene dimerization was investigated by using an 84T cluster of faujasite zeolite modeled by the ONIOM3(MP2/6-311++G(d,p):HF/6-31G(d):UFF) method. Concerted and stepwise mechanisms were evaluated. In the stepwise mechanism, the reaction proceeds by protonation of ethylene to form the surface ethoxide and then C--C bond formation between the ethoxide and the second ethylene molecule to give the butoxide product. The first step is rate-determining and has an activation barrier of 30.06 kcal mol(-1). The ethoxide intermediate is rather reactive and readily reacts with another ethylene molecule with a smaller activation energy of 28.87 kcal mol(-1). In the concerted mechanism, the reaction occurs in one step of simultaneous protonation and C--C bond formation. The activation barrier is calculated to be 38.08 kcal mol(-1). Therefore, the stepwise mechanism should dominate in ethylene dimerization.     

Mechanistic study of the deamination reaction of guanine: a computational study

The mechanism for the deamination of guanine with H(2)O, OH(-), H(2)O/OH(-) and for GuaH(+) with H(2)O has been investigated using ab initio calculations. Optimized geometries of the reactants, transition states, intermediates, and products were determined at RHF/6-31G(d), MP2/6-31G(d), B3LYP/6-31G(d), and B3LYP/6-31+G(d) levels of theory. Energies were also determined at G3MP2, G3MP2B3, G4MP2, and CBS-QB3 levels of theory. Intrinsic reaction coordinate (IRC) calculations were performed to characterize the transition states on the potential energy surface. Thermodynamic properties (ΔE, ΔH, and ΔG), activation energies, enthalpies, and Gibbs free energies of activation were also calculated for each reaction investigated. All pathways yield an initial tetrahedral intermediate and an intermediate in the last step that dissociates to products via a 1,3-proton shift. At the G3MP2 level of theory, deamination with OH(-) was found to have an activation energy barrier of 155 kJ mol(-1) compared to 187 kJ mol(-1) for the reaction with H(2)O and 243 kJ mol(-1) for GuaH(+) with H(2)O. The lowest overall activation energy, 144 kJ mol(-1) at the G3MP2 level, was obtained for the deamination of guanine with H(2)O/OH(-). Due to a lack of experimental results for guanine deamination, a comparison is made with those of cytosine, whose deamination reaction parallels that of guanine.     

The Thermal Dimerization and Polymerization of 1,3-Cyclohexadiene

Abstract

The thermal polymerization of 1,3-cyclohexadiene to produce dimer and low molecular weight polymer is reported. The reaction initiated thermally and/or by benzoyl peroxide is kinetically of the second order, and the activation energy is 13.1 kcal/mole. The activation energy for the reaction is in quantitative agreement with that of the homopolymerization of 1,3-cyclohexadiene estimated from the kinetic study on the copolymerization with acrylonitrile. Evidently the dimerization process to give dimer as a product of typical Diels-Alder condensation is a competing type of reaction with radical polymerization to give a low molecular weight polymer. The ratio of the rate constant for two competing types of reaction at 200°C is found to be 1.21. The thermal polymerization in the presence of oxygen produces dimer in greater yield as a result of inhibition of the radical polymerization process.     

An ab initio study of substituent effects in [1,3]-hydrogen shifts

Reports in the literature place the TS for the [1,3]-H shift in propene comparable to or higher in energy than loss of the allylic H. However, [1,3]-H shifts have been repeatedly observed experimentally in enolates. We used GAUSSIAN 98 to examine the origin of this apparent contradiction. We found the first TS for an antarafacial [1,3]-H shift that is clearly lower in energy than simple dissociation of the migrating H. This occurs in the [1,3]-H shift in the acetone enolate. Symmetrical substituents (H, O(-), ethynyl) have TSs with C(2) symmetry, implying that they, and probably most [1,3]-H shift TSs, are antarafacial. Conjugating substituents at C2 lower the energy of [1,3]-H shifts and raise the energy of dissociation by loss of a hydrogen atom from C3, increasing the likelihood of the former type of reaction. Strongly electron-donating and electron-withdrawing substituents are more effective than neutral substituents in lowering the energy requirement of [1,3] shifts. Our best calculations predict that a [1,3]-H shift is lower in energy than dissociation by loss of the H by 27.8 kJ/mol in 2-methyl-1-butene-3-yne, by 36.8 kJ/mol in isoprene, by 55.9 kJ/mol in 2-aminopropene, by 114.5 kJ/mol in the acetone enolate, and by 120.8 kJ/mol in the 1-methylacryloyl cation. Thus, there is a chance of experimental observation of [1,3] shifts in conjugated alkenes and related species.     

Reaction of iminopropadienones with amines: mechanistic explanations of zwitterionic intermediate, ketene and ketenimine formation

The complex reaction of thermally generated iminopropadienones with amines in the gas phase and upon matrix deposition and its varying product composition is investigated using density functional theory. In the high energy gas phase addition a single amine molecule reacts readily with iminopropadienone with the decisive step being a 1,3-hydrogen shift and activation barriers of at least 100 kJ/mol. In accordance with the experiment, the formation of ketenes is favored. In the condensed phase of an amine matrix, the utilization of amine dimers both as reagents and as explicit solvents lowers the activation energy required to a feasible 20-30 kJ/mol and predicts ketenimines as the main products, as observed experimentally.     

双烯类聚合物的热分析Ⅱ.不同含1,2-含量无规聚丁二烯热(氧化)的研究

不同1,2-含量无规聚丁二烯的研究表明,与侧链乙烯基相比,主链双键更易于发生热氧化反应,这可能因其含有较多的α-氢。根据热氧化温度和动力学参数活化能E,钴系高1,2-含量间规聚丁二烯比之钼(或锂)系聚丁二烯更为稳定,前者E值高达150kJ/mol以上,后者为100kJ/mol左右。热交联表观活化能分别为181、166kJ/mol。它们热氧化稳定性的差别,是由于通常钴系聚合物为晶态,锂(或钼)系为非晶态。