The molecular structure of tetramethoxysilane in the gas phase,an electron diffraction study

The molecular structure of tetramethoxysilane was determined in the gas phase by electron diffraction. The molecule has S₄ symmetry, slightly flattened along the axis. The SiO bonds are shorter than in methylsilylether, demonstrating the effect of electronegative substituents on the Si atom. The geometrical parameters (r_a structure) are: Si-O bond 1.613 Å; C-O bond 1.414 Å; C-H bond 1.12 Å; O-Si-O angle bisected by S₄ axis 115.5°; Si-O-C angle 122.3°; O-C-H angle 111°; methoxyl torsional angle 64°; methyl torsional angle 60°.     

The molecular structure of tetramethoxymethane in the gas phase: an electron diffraction study

The electron diffraction study of tetramethoxymethane showed that in the gas phase the molecule has S₄ symmetry, flattened along the S₄ axis. Central and peripheral C-O bond lengths are different, consistent with considerations based on the anomeric effect. Comparison is made with ab initio calculations on methanediol. The geometrical parameters (r_g(1) structure) are: central C-O bond 1.395 Å; peripheral C-O bond 1.422 Å; C-H bond 1.11 Å; O-C-O angle bisected by the S₄. axis 114.7°; C-O-C angle 114.0°; O-C-H angle 111.9°; methoxy torsional angle 63.1°; methyl torsional angle 48.5°.     

The molecular structure of S-triazine in the gas phase determined from electron diffraction, infrared/raman data and ab initio force field calculations

The gas phase molecular structure of s-triazine has been determined from electron diffraction data. Experimental vibrational parameters proved consistent with those from the 4-21G force field after scaling onto infrared/Raman frequencies, as well as after direct scaling on electron diffraction data. The analysis resulted in the following r_g/r^°-parameters CN = 1.338(1) Å, CH = 1.106(8) Å, CNC = 113.9(1), NCN = 126.1, HCN = 116.9. The (new) r_g – r_e (4-21G) correction for aromatic CN is 0.006(1) Å.     

Molecular structure of aniline in the gaseous phase: A concerted study by electron diffraction and ab initio molecular orbital calculations

The molecular structure of free aniline has been investigated by gas-phase electron diffraction and ab initio MO calculations at the HF and MP2 levels of theory, using the 6-31G^*(6D) basis set. Least-squares refinement of a model withC _s symmetry, with constraints from MP2 calculations, has led to an accurate determination of the C-C-C angle at theipso position of the benzene ring, =119.0±0.2 (where the uncertainty represents total error). This parameter provides information on the extent of the interaction between the nitrogen lone pair and the system of the benzene ring, and could not be determined accurately by microwave spectroscopy. The angles at theortho, meta, andpara positions of the ring are 120.3±0.1, 120.7±0.1, and 119.0±0.3, respectively. Important bond distances are r _g(C-C)=1.398±0.003 å andr _g(C-N) =1.407±0.003 å. The effective dihedral angle between the H-N-H plane and the ring plane, averaged over the large-amplitude inversion motion of the amino group, is ¦¦=44±4. The equilibrium dihedral angle is calculated to be 41.8 at the HF level and 43.6 at the MP2 level, in agreement with far-infrared spectroscopic information. The MO calculations predict that the differencer(C_ortho-C_meta) -r(C_ipso-C_ortho) is 0.008–0.009 å. They also indicate that the nitrogen atom is displaced from the ring plane, on the side opposite to the amino hydrogens. The displacement is 0.049 å at the HF level and 0.072 å at the MP2 level. The two calculations, however, yield very different patterns for the minute deviations from planarity of the ring carbons.     

The molecular structure of 1,1,1-trimethoxyethane in the gas phase as determined by electron diffraction,molecular mechanics calculations and vibratio

The structure of 1,1,1-trimethoxyethane has been studied by electron diffraction in the gas phase. Although this technique cannot discriminate between a GGG (point symmetry C₃) and a TGG (C₁) conformation, vibrational spectra indicate that in the gas phase the C₁ conformer is predominant. Constraints necessary for a satisfactory leastsquares refinement were obtained from molecular mechanics calculations. The molecular geometry as obtained from r_α-refinements is as follows (r_g distances, r_α angles; standard deviations in parentheses): r(C-O central = 1.398 (6) Å, r(C-O)_terminal = 1.431(6)Å, r(C-C) = 1.527 (6) Å, r(C-H) = 1.114 (1) Å, ∠(C-O-C) = 114.0 (4)°, ∠(O-C-H) = 110.7 (4)°; the C-C-O and O-C-0 angles around the central carbon range between 106.6° and 113.1°.     

Molecular structure of ethynylbenzene from electron diffraction and ab initio molecular orbital calculations

The molecular structure and benzene ring distortions of ethynylbenzene have been investigated by gas-phase electron diffraction and ab initio MO calculations at the HF/6-31G^* and 6-3G^** levels. Least-squares refinement of a model withC _2v, symmetry, with constraints from the MO calculations, yielded the following important bond distances and angles:r _g(C _i -C _o )=1.407±0.003 Å,r _g(C _o -C _m )=1.397±0.003 Å,r _g(C _m -C _p )=1.400±0.003 Å,r _g(Cr _i -CCH)=1.436 ±0.004 Å,r _g(C=C)=1.205±0.005 Å, C _o -C _i -C _o =119.8±0.4°. The deformation of the benzene ring of ethynylbenzene given by the MO calculations, including o-C_i-C_o=119.4°, is insensitive to the basis set used and agrees with that obtained by low-temperature X-ray crystallography for the phenylethynyl fragment, C₆H₅-CC-, in two different crystal environments. The partial substitution structure of ethynylbenzene from microwave spectroscopy is shown to be inaccurate in the ipso region of the benzene ring.     

The molecular structure of fluoromalononitrile as determined by gas-phase electron diffraction and ab initio calculations

The molecular structure of fluoromalononitrile was studied by means of gas-phase electron diffraction and quantum mechanical methods using HF/6-31G(d), MP2/6-311++G(2df,2pd) and DFT/B3LYP/6-31G(d), B3PW91/6-31G(d), B3LYP/6-311++G(2df,2pd) and B3PW91/6-311++G(2df,2pd). The r(g) and angle(alpha) structural parameters we obtained from the present analysis are: CC=1.487(5) A, CN=1.157(3) A, CF=1.386(5) A, CH=1.096 A (ass.), angleCCC=106.7(1.0) degrees , angleCCF=108.0(0.7) degrees , angleCCN=177.6(2.0) degrees . Uncertainties in parenthesis are 3sigma.     

An electron diffraction study of the molecular structure of methylthionformate in the gas phase

The molecular structure of methylthionformate in the gas phase has been determined by electron diffraction. The CS and O-CH₃ bonds are nearly eclipsed. The dihedral angle between the C-O-C and O-C-S plane is 15.8 ± 2.5°.     

Molecular structure of phenylsilane: a study by gas-phase electron diffraction and ab initio molecular orbital calculations

The molecular structure of phenylsilane has been determined accurately by gas-phase electron diffraction and ab initio MO calculations at the MP2(f.c.)/6-31G* level. The calculations indicate that the perpendicular conformation of the molecule, with a Si–H bond in a plane orthogonal to the plane of the benzene ring, is the potential energy minimum. The coplanar conformation, with a Si–H bond in the plane of the ring, corresponds to a rotational transition state. However, the difference in energy is very small, 0.13 kJ mol⁻¹, implying free rotation of the substituent at the temperature of the electron diffraction experiment (301 K). Important bond lengths from electron diffraction are: <r_g(C–C)>=1.403±0.003 Å, r_g(Si–C)=1.870±0.004 Å, and r_g(Si–H)=1.497±0.007 Å. The calculations indicate that the C_ipso–C_ortho bonds are 0.010 Å longer than the other C–C bonds. The internal ring angle at the ipso position is 118.1±0.2° from electron diffraction and 118.0° from calculations. This confirms the more than 40-year old suggestion of a possible angular deformation of the ring in phenylsilane, in an early electron diffraction study by F.A. Keidel, S.H. Bauer, J. Chem. Phys. 25 (1956) 1218.     

The gas phase molecular structure of silyl formate,determined by electron diffraction

The structure of silyi formate, HCOOSiH₃, in the gas phase is determined by electron diffraction. The principal bond lengths and angles (r_a) are r(Si-O) = 169.5 ± 0.3 pm, r(C-O) = 135.1 ± 0.6 pm, r(C  O) = 120.9 ± 0.7 pm, ∠(C-O-Si) = 116.8 ± 0.5°, ∠(OC-O) = 123.5 ± 0.5°. The silyi group is twisted by 21° away from the planar cis conformation but there is nevertheless a very short (286.5 ±1.0 pm) non-bonded Si ·O contact.     

Combined ab initio,electron diffraction,molecular mechanics and vibrational investigations of 1,1 -dimethyl-trans-2-decalone

The conformational behavior of 1,1'dimethyl-trans-2-decalone was studied by combined ab initio, electron diffraction, molecular mechanics and vibrational procedures, and the molecule was found to exist in a distorted all-chair ground state with average C-C, C-H and CO bond distances of r_g = 1.543 Å ± 0.002, r_g = 1.122 Å ± 0.007, and r_g = 1.236 Å ± 0.012, respectively. The ab initio calculations were performed on an STO-3G minimal basis and are indicative of the growing usefulness of quantum-mechanical techniques in the study of medium-sized molecular systems.     

3-chloro-1-butene: gas-phase molecular structure and conformations as determined by electron diffraction and by molecular mechanics and ab initio calculations

Gaseous 3-chloro-1-butene has been studied experimentally by electron diffraction (ED) at 20 and 180°C, and at these temperatures, 76(10)% and 62(10)%, respectively, of the most stable conformer i.e. the one having a hydrogen atom eclipsing the double bond, were found. The conformer with the chlorine atom eclipsing the C=C bond was also present. However, from the experimental data it was not possible to establish conclusive evidence for the conformer with an eclipsed CH₃ group. Molecular mechanics (MM) calculations and ab initio calculations using a 4-21 basis set were carried out with complete geometry optimization, and calculated parameters from each of the methods were used in combination with the ED data. Such calculations indicated the existence of all three conformers mentioned above. Least-squares analysis including constraints from the ab initio calculation gave as a result the following molecular structure (r_a distances and ??? angles) for the predominant conformer: r(C=C) = 1.337(6) Å, r(=C---C) = 1.503(4) Å, r(C---CH₃) = 1.522 Å, R(C---Cl) = 1.813(4) Å, <r(C---H)> = 1.089(18) Å, ???C=C---C = 122.9(2.1)°, ???C---C---C = 112.6(2.2)°, ???=C---C---Cl = 109.9(0.2)°, ???Cl---C---CH₃ = 109.3°. = 121.9° and = 110.0(1.3)°. The torsional angles were then τ(C=C---C---Cl> = −119.4° and τ(C=C---C---CH₃) = 120.3(2.1)°. Error limits are 2σ (σ includes estimates of systematic errors and correlations), parameters without quoted uncertainties are dependent or were constrained relative to another parameter. Combining the ED data with MM results yielded parameters consistent with those given above.     

Structure and conformation of cyclobutylsilane: an electron diffraction and ab initio study

A gas electron diffraction study of cyclobutylsilane results in a mixture of equatorial and axial conformers, with the equatorial confomer slightly more stable (Δ G = 0.8 ± 0.4 kJ mol⁻¹). The cyclobutyl ring is distorted with the adjacent bonds longer (C₁---C₂ = 1.573 (4) Å) than the opposite bonds (C₂---C₃ = 1.557 (4) Å). The experimental values for the energy difference between the two conformers and for the geometric parameters are reproduced very well by ab initio calculations. The importance of silicon 3d orbitals in the interpretation of ring distortion is ambiguous, but on the basis of the ab initio calculations the participation of silicon 3d functions is negligible.     

The molecular structure and the puckering potential function of silacyclobutane as determined by gas electron diffraction and relaxation constraints from ab initio calculations

Gas electron diffraction is applied to determine the geometric parameters of the silacyclobutane molecule using a dynamic model where the ring puckering was treated as a large amplitude motion. The structural parameters and the parameters of the potential function were refined taking into account the relaxation of the molecular geometry estimated from ab initio calculations at the MP2/6-311+G(d, p) level of theory. The potential function has been described as V() = V₀[(/_e)² − 1]² with the following parameters V₀ = 0.82 ± 0.60 kcal/mol and _e = 33.5 ± 2.7°, where is a puckering angle of the ring.

The geometric parameters at the minimum V() (r_a in Å, in degrees and uncertainties given as three times the standard deviations including a scale error) are: r(Si–H_ax) = 1.467(96), r(Si–H_eq) = 1.468(96), r(Si–C) = 1.885(2), r(C–C) = 1.571(3), r(C–H) = 1.100(3), CSiC = 77.2(9), HSiH = 108.3, SiCH_eq = 123.5(16), SiCH_ax = 111.9(16), CC₅H_eq = 118.4(24), CC₅H_ax = 112.3(24), HC₃H = 107.7, δ(HSiH) = 6.6, δ(HC₃H) = 7.0, where the tilts δ, HSiH, and HC₃H are estimated from ab initio constraints. The structural parameters are compared with those obtained for related compounds.     

The molecular structure of 1,1-dichloro-1-silacyclo-hexane and of 1,1-dimethoxy-1-silacyclohexane in the gas phase, an electron diffraction study

The molecular structure of 1,1-dichloro-1-silacyclohexane (DCSC) and of 1,1-dimethoxyl-silacyclohexane (DMSC) has been determined by gas phase electron diffraction. Starting values for the vibrational parameters were obtained from force field calculations.

Both molecules are in the chair conformation with a flattening in the vicinity of the silicon atom, which is most pronounced in the dichloro-compound. Disregarding the substituents the title compounds show C_s-symmetry. In DMSC the gem-dimethoxy grouping is in the sc, sc conformation in accordance with the anomeric effect.

A comparison is made between the experimentally found geometries with predictions of molecular mechanics calculations based on two available force fields.     

The gas-phase molecular structure of 1,1-diethynylsilacyclobutane as determined by means of electron diffraction and ab initio calculations

As a continuation of our systematic investigation of the effect of substituents on the ring geometry and dynamics in silacyclobutanes and in order to explore the role of the silicon atom as a mediator for electronic interactions between the attached fragments, we studied the molecular structure of 1,1-diethynylsilacyclobutane (DESCB) by means of gas-phase electron diffraction and ab initio calculations. The structural refinement of the electron diffraction data yielded the following bond lengths (r_a) and bond angles (uncertainties are 3σ): r(Si–C)=1.874(2) Å, r(Si–C)=1.817(1) Å, (C–Si–C)=79.2(6)°, (C–Si–C)=106.5(6)°. The geminal Si–CC moieties were found to be bent outwards by 3.1(15)° and the puckering angle was determined to be 30.0(15)°. The evidently short Si–C bond length, which was also reproduced by the ab initio calculations, could be rationalized as being the consequence of the electronic interaction between the outer π charges of the triple bond and the 3pπ orbitals at the silicon atom. It is also likely that the conjugation of the geminal ethynyl groups leads to an enhancement of this bond contraction. Electrostatic interactions and the subsequent reduction of the covalent radius of the silicon atom may also contribute to this bond shortening. It has been found that the endocyclic Si–C bond length fits nicely within a scheme describing a monotonous decrease of the Si–C bond length with the increase of the electronegativity of the substituent in various geminally substituted silacyclobutanes.A series of related silacyclobutanes and acyclic diethynylsilanes have been studied by applying various ab initio methods and their optimized structures were compared to the structure of DESCB. Among these compounds are 1,1-dicyanosilacyclobutane (DCYSCB), which is isoelectronic to DESCB, 1,1-diethynylcyclobutane (DECB) which is isovalent to DESCB, monoethynylsilacyclobutane (MESCB) and monocyanosilacyclobutane (MCYSCB). Searching for reasonable support for the explanation of the structural results of DESCB we performed detailed natural population analysis as well as Mulliken population analysis (MPA) on DESCB and other related molecules. In contrast to the Mulliken charges, the natural atomic charges provided helpful information concerning the bonding properties in DESCB and the corresponding compounds. By varying the size of some basis sets, we could demonstrate the validity of the repeatedly discussed dependency of the Mulliken MPA on the basis set.For the performance of the quantum mechanical calculations we employed the following methods and basis sets: HF/6-31G(d,p), DFT/B3PW91/6-31G(d), DFT/B3PW91/6-311++G(d,p), MP2/6-31G(d,p) and MP2/6-311++G(d,p).     

Photodissociation of acetic acid in the gas phase: an ab initio study

Photodissociation of acetic acid in the gas phase was investigated using ab initio molecular orbital methods. The stationary structures on the ground-state potential energy surfaces were mainly optimized at the MP2 level of theory, while those on the excited-state surfaces were determined by complete active space SCF calculations with a correlation-consistent basis set of cc-pVDZ. The reaction pathways leading to different photoproducts are characterized on the basis of the computed potential energy surfaces and surface crossing points. The calculations reproduce the experimental results well and provide additional insight into the mechanism of the ultraviolet photodissociation of acetic acid and related compounds.     

The molecular structure and conformation of dichlorotetramethyldisiloxane as determined by gas phase electron diffraction

Dichlorotetramethyldisiloxane is studied by gas-phase electron diffraction at room temperature. The least-squares values of the bond distances (r_g) and bond angles () are: r(C---H)=1.084(5) Å, r(Si---O) = 1.624(2) Å, r(Si---C) = 1.852(2) Å, r(Si---Cl) = 2.067(2) Å, SiOSi = 154.0° (1.5), ClSiO = 110.2° (0.8), ClSiC = 109.6°(0.7), HCSi = 111.7°(1.5), OSiC = 110.0°(0.8), τ₁ (zero corresponds to the Si---Cl bond trans to the Si---O---Si linkage) = 78°(6) and τ₂ = 141°(19). A two-conformer model cannot be ruled out.