Synthesis of Taiwan Cobra Venom Cardiotoxin II Synthesis of Protected Hexapeptide,Sequence 44-49 and Protected Tripeptide,Sequence 50-52

The protected hexapeptide (sequence 44-49) and the protected tripeptide (sequence 50-52) of Taiwan Cobra (Naja naja atra) venom cardiotoxin were synthesized by stepwise coupling and fragment coupling methods. The protected hexapeptide is Nps-Lys(Z)-Ser-Ser-Leu-VaI-Leu-OMe and the protected tripeptides are Nps-Lys(Z)-Tyr(Bzl)-Val-OMe and Boc-Lys(Z)-Tyr(Bzl)-VaI-OMe.     

Synthesis and characterization of nano-composite ion-exchanger; its adsorption behavior

A novel organic-inorganic nanocomposite cation-exchanger has been synthesized via sol-gel method. It was characterized on the basis of FTIR, XRD, SEM, TEM, AFM and Raman studies. The structural studies reveal semi-crystalline nature of the material with the particle size ranging from 1-5 nm. Physiochemical properties such as ion-exchange capacity, chemical and thermal stability of composite material have also been determined. Bifunctional behavior of the material has been indicated by its pH titrations curves. The nanocomposite material exhibits improved thermal stability, higher ion-exchange capacity and better selectivity for toxic heavy metals. The ion-exchange material shows an ion-exchange capacity of 1.8 meq g(-1) for Na(+) ions. Sorption behavior of metal ions on the material was studied in different solvents. The cation exchanger was found to be selective for Pb(II), Hg(II) and Zr(IV) ions. The limit of detection (LOD) and the limit of quantification (LOQ) for Pb(II) ion was found to be 0.85 and 2.85 μg L(-1). Analytically important separations of heavy metal ions in synthetic mixtures as well as industrial effluents and natural water were achieved with the exchanger. The practical utility of polyanilineZr(IV)sulphosalicylate cation exchanger has been established for the analysis and recovery of heavy metal ions in environmental samples.     

Synthesis of new ionic β-cyclodextrin polymers and characterization of their heavy metals retention

In this study, a new aqueous insoluble ionic β-cyclodextrin polymer (PYR), synthesized by reaction of β-cyclodextrin with pyromellitic anhydride [1], is characterized by IR spectroscopy, showing typical cyclodextrin and carboxylic absorptions. pH-metric titrations of the acidic functions with standard NaOH solutions followed by a refinement of protonation constants, with specific software for equilibrium in solution, have been performed. Through this approach, the pK _a values of the functional groups have been calculated. The complexation capabilities of PYR towards metal ions [Al(III), Mn(II), Co(II), Ni(II), Cu(II), Zn(II), Pd(II), Cd(II), Pt(IV), Tl(I), and U(IV)] have been evaluated in aqueous solution (pH 3–5). The retention is mainly pH dependent and higher than 70% for Al(III), Mn(II), Co(II), Ni(II), Cu(II), Zn(II), Pd(II), Cd(II) and U(IV). For Tl(I) and Pt(IV) the retention is about 60% and 40% respectively.     

Redox behaviors of Fe(II/III) and U(IV/VI) studied in synthetic water and KURT groundwater by potentiometry and spectroscopy

The redox behaviors of Fe(II/III) and U(IV/VI) in both synthetic samples and natural groundwater were investigated with potentiometry, UV/VIS absorption spectroscopy, and time-resolved laser fluorescence spectroscopy. Total dissolved Fe(II/III) concentration along with presence of mixed redox couples of Fe²⁺/Fe³⁺ and Fe²⁺/Fe₂O₃(s) were revealed to be the major factors influencing on the redox potentials. Considerable discrepancies between redox potentials obtained with quantitative analysis and chemical speciation of Fe(II/III) and U(IV/VI) ions were identified in the KAERI Underground Research Tunnel groundwater. Chemical speciation of U(IV) in natural groundwater without considering relevant complexation reaction might cause relatively large uncertainties in redox potential calculations.     

Studies on the Oral Anticancer Drug JM-216: Synthesis and Characterization of Isomers and Related Complexes

The complex cis,trans,cis-[PtCl(2)(OAc)(2)NH(3)(c-C(6)H(11)NH(2))] (JM-216) is currently undergoing clinical evaluation as an antitumor agent. In support of characterization and analysis of this complex a study of its isomers and other complexes [PtCl(m)()(OAc)((4)(-)(m)()())NH(3)(c-C(6)H(11)NH(2))] (m = 0-4) has been undertaken. The complexes have been obtained by a variety of synthetic routes which now extend the scope for the preparation of platinum(IV) antitumor complexes. As platinum(IV) complexes are very stable to substitution in the absence of catalysis, use has been made of both light and base catalysis to promote substitution. Oxidative addition to platinum(II) using hypervalent iodine reagents has also been used. The stereochemistry of the complexes has been confirmed by spectroscopic studies, primarily NMR including natural abundance (15)N NMR spectroscopy.     

Synthesis and efficiency of poly(acrylamidrazonehydrazide) chelating fiber for preconcentrating and separating trace gold and palladium from solution

A new poly(acrylamidrazone-hydrazide) chelating fiber has been synthesized using polyacrylonitrile fiber as a starting material. An ICP-OES method for applying the fiber to preconcentrate and separate trace Au(III) and Pd(IV) ions in solution has been established. The experiments show that 8 ng/ml Au(III) and 6 ng/ml Pd(IV) in 1000 ml of solution can be enriched quantitatively by the fiber column at a flow rate of 12 ml/min at pH 2. These ions can be desorbed quantitatively with 10 ml of 2.5% CS(NH₂)₂ + 6% H₂SO₄ containing 0.2% Fe(II) from the column at an elution rate of 6 ml/min. A fiber treated with 12M HCl or 15M HNO₃ can be re-used 10 times with above 95% recoveries of Au(III) and Pd(IV), and 120–800-fold excesses of Cu(II), Mn(II), Fe(III), Al(III), Ni(II), Mg(II) and Ca(II) ions cause little interference. The RSDs are 2.0% for 8 ng/ml Au and 3.5% for 6 ng/ml Pd. The recovery of added standard in a solution sample from a metal smelter is 96.2% for Au and 100% for Pd, and the content of each ion in the sample determined by the method is in agreement with the analysed value from the smelter laboratory.     

Synthesis of Polyacrylaminothiourea Chelating Fiber and Properties of Concentration and Separation of Trace Noble Metal Ions from Samples

A novel polyacrylaminothiourea chelating fiber was synthesized simply and rapidly from nitrilon (an acrylonitrile-based synthetic fiber), which was applied to preconcentrate and separate of trace amount of Au(Ⅲ）,Pt(Ⅳ）,Pd(Ⅳ） and Ir (Ⅳ） ions from solution of samples.The analyzed ions can be quantitatively concentrated by the fiber up to a flow rate of 20.0mL/min at pH2, and can also be desorbed with 15 mL of 4mol/L HCl 3% thiourea from the fiber column with recoveries of 96.5%-100%.The chelating fiber can be reused for ten times,the recoveries of these ions are still over 92%,and hundred to thousand times of excess of Fe(Ⅲ）,Al（Ⅲ）,Ca(Ⅱ），Mg（Ⅱ）,Ni(Ⅱ）,Mn（Ⅱ),Cu(Ⅱ），Zn(Ⅱ），and Cd(Ⅱ） cause no interference on the determination of the analyzed ions by inductively-coupled plasma atomic emission spectrometry (ICP-AES).The static saturation adsorption capacities of the fiber for the analytes are in the range of 1.15-2.80mmol/g.The relative standard deviations for the determination of 20.0ng/mL each of Au(Ⅲ）,Pt(Ⅳ）,Pd(Ⅳ）and Ir(Ⅳ） are in the range of 0.7%-3.0%.The recoveries for test from standard additions to real solution samples are between 96% and 100%.The concentration of each ion in powder sample detected by the method is in good agreement with the certified value.     

Solvent Extraction Separation of Germanium(IV) with N-<Emphasis Type="Italic">n</Emphasis>-Octylaniline As an Extractant

The extraction behavior of germanium(IV) from aqueous hydrochloric acid solution with N-n-octylaniline in xylene was investigated. Hydrochloric acid concentration higher than 9 M remained effective for quantitative extraction of germanium(IV). Phenylfluorone ion as a counter anion was used. More than 2% N-n-octylaniline provided quantitative extraction at 1 min equilibrium time and germanium(IV) was back extracted by 7 M ammonia. The method was free from the interference of a large number of metal ions and anions, except for Te(IV) and Sn(IV); this was avoided using the masking effect. Germanium(IV) was separated from associated elements in its binary mixture with Si(IV), Te(IV), Sb(III), Bi(III), Au(III), Cu(II), Zn(II), and its ternary mixture with Se(IV), Te(IV); Sb(III), Bi(III); and Au(III), Cu(II). The proposed method was applied to a synthetic sample containing associated metal ions. The results indicated that trace amounts of germanium(IV) could be separated effectively from higher amounts of other elements.__________From Zhurnal Analiticheskoi Khimii, Vol. 60, No. 5, 2005, pp. 463–467.Original English Text Copyright © 2005 by Sargar, Anuse.This article was submitted by the authors in English.     

Solid‐Phase Synthesis of Polyamine Spider Toxins and Correlation with the Natural Products by HPLC‐MS/MS

A recently developed new and divergent approach for the solid‐phase synthesis of polyamines and polyamine derivatives was extended to the preparation of linear pentamines, and it was applied to the synthesis of three quartets of isomeric polyamine spider toxins. The twelve synthetic acylpolyamines were investigated by HPLC‐UV(DAD)‐MS and HPLC‐UV(DAD)‐MS/MS and compared with the natural products in the complex mixture of the venom of Agelenopsis aperta. The comparative investigation supported the structures and assignments of seven previously found toxins and allowed the identification of an additional five polyamine derivatives in the natural sample. The MS/MS study of the isomerically pure polyamine derivatives revealed furthermore a characteristic pattern for the fragmentation of these compounds, which can possibly be used as evidence in the trace analysis of other polyamine derivatives.     

Synthesis of polyacrylaminoimidazole chelating fiber and properties of concentration and separation of trace Au, Hg and Pd from samples

A novel polyacrylaminoimidazole chelating fiber is synthesized simply and rapidly from nitrilon (an acrylonitrile-based synthetic fiber) and used for the preconcentration and separation of trace Au(III), Hg(II) and Pd(IV) ions from solution samples. The analyzed ions can be quantitatively concentrated by the fiber up to a flow rate of 15.0 mlmin(-1) at pH 3 and can also be desorbed with 15 ml of 4 M HCl+3% thiourea from the fiber column, with recoveries of 96.5-100%. The chelating fiber is reused ten times; the recoveries of these ions are still over 92%, and 100-1000 times of excess of Fe(III), Al(III), Ca(II), Mg(II), Ni(II), Mn(II), Cu(II), Zn(II) and Cd(II) causes no interference in the determination of these ions by inductively coupled plasma atomic emission spectrometry. The capacities of the fiber for the analytes are in the range of 1.56-2.92 mmolg(-1). The results show that the relative standard deviations for the determination of 50.0 ngml(-1) each of Au(III), Hg(IV) and Pd(IV) are in the range of 0.7-2.1%. The recoveries of a standard added in real solution samples are between 97 and 99%, and the concentration of each ion in powder sample detected by the method is in good agreement with the certified value.     

MEKC determination of vanadium from mineral ore and crude petroleum oil samples using precapillary chelation with bis(salicylaldehyde)tetramethyl‐ethylenediimine

An analytical procedure has been developed for the separation of Cu(II), Ni(II), Co(II), Fe(II), Pd(II), Th(IV), V(IV), and determination of Fe(II), Co(II), Ni(II), and V(IV) by MEKC after chelation with bis(salicylaldehyde)tetramethylethylenediimine (H₂SA₂Ten). Uncoated fused silica capillary was used with an applied voltage of 30 kV with photo‐diode array detection at 228 nm. SDS was added as micellar medium at pH 8.2 with sodium tetraborate buffer (0.1 M). Linear calibrations were established within 0.015–1000 μg/mL of each element with LOD within 5–67 ng/mL. The method was applied for the determination of vanadium from crude oil and ore samples in the range 0.34–2.40 and 114.2–720.7 μg/g with RSD 1.7–3.8 and 0.98–2.30% (n = 3), respectively. Fe, Ni, and Co present in crude oil and ore samples were also determined with RSD 1.3–2.8, 1.1–4.1, and 1.2–3.5% (n = 3), respectively. The results were compared with that of supplier's specifications and atomic absorption spectrometry (AAS). Method was evaluated by standard addition technique.     

Determination of the Absolute Configuration of Perylene Quinone‐Derived Mycotoxins by Measurement and Calculation of Electronic Circular Dichroism Spectra and Specific Rotations

Altertoxins I–III, alterlosins I and II, alteichin (alterperylenol), stemphyltoxins I–IV, stemphyperylenol, stemphytriol, 7‐epi‐8‐hydroxyaltertoxin I, and 6‐epi‐stemphytriol are mycotoxins derived from perylene quinone, for which the absolute configuration was not known. Electronic circular dichroism (ECD) spectra were calculated for these compounds and compared with measured spectra of altertoxins I–III, alteichin, and stemphyltoxin III and with reported Cotton effects. Specific rotations were calculated and compared with reported specific rotations. The absolute configuration of all the toxins, except for stemphyltoxin IV, could thus be determined. The validity of the assignment was high whenever reported ECD data were available for comparison, and the validity was lower when the assignment was based only on the comparison of calculated and reported specific rotations. ECD spectra are intrinsically different for toxins with a biphenyl substructure and for toxins derived from dihydroanthracene.     

Synthesis and investigation of binding interactions of 1,4-benzoxazine derivatives on topoisomerase IV in Acinetobacter baumannii$

Abstract

Acinetobacter baumannii has emerged as an important pathogen for nosocomial infections having high morbidity and mortality. This pathogen is notorious for antimicrobial resistance to many common antimicrobial agents including fluoroquinolones, which have both intrinsic and acquired resistance mechanisms. Fluoroquinolones targeting the bacterial topoisomerase II (DNA gyrase and Topo IV) show potent broad-spectrum antibacterial activity by the stabilization of the covalent enzyme–DNA complex. However, their efficacy is now being threatened by an increasing prevalence of resistance. Fluoroquinolones cause stepwise mutations in DNA gyrase and Topo IV, having alterations of their binding sites. Furthermore, the water–Mg⁺² bridge, which provides enzyme–fluoroquinolone interactions, has a significant role in resistance. In this study, 13 compounds were synthesized as 1,4-benzoxazine derivatives which act as bacterial topoisomerase II inhibitors and their antibacterial activities were determined against multi-drug resistant Acinetobacter strains which have ciprofloxacin (CIP) resistant and GyrA mutation. Afterwards we performed docking studies with Topo IV (pdb:2XKK) of these compounds to comprehend their binding properties in Discovery Studio 3.5. The results of this study show significant conclusions to elucidate the resistance mechanism and lead to the design of new antibacterial agents as bacterial topoisomerase II inhibitors.     

Measuring the Elasticity of Poly‐l‐Proline Helices with Terahertz Spectroscopy

The rigidity of poly‐l ‐proline is an important contributor to the stability of many protein secondary structures, where it has been shown to strongly influence bulk flexibility. The experimental Young's moduli of two known poly‐l ‐proline helical forms, right‐handed all‐cis (Form I) and left‐handed all‐trans (Form II), were determined in the crystalline state by using an approach that combines terahertz time‐domain spectroscopy, X‐ray diffraction, and solid‐state density functional theory. Contrary to expectations, the helices were found to be considerably less rigid than many other natural and synthetic polymers, as well as differing greatly from each other, with Young's moduli of 4.9 and 9.6 GPa for Forms I and II, respectively.     

Synthesis,characterization, and antimicrobial activity of heterobimetallic complexes of Sn(IV) and Zn(II) with 4-aminophenylacetic acid

A series of new heterobimetallic complexes of zinc and tin with 4-aminophenylacetic acid has been prepared. Their composition and structure in solid state and in solution have been elucidated by elemental analysis, IR, ¹H NMR, and ¹³C NMR spectroscopy. IR spectroscopy results have confirmed the bidentate nature of the ligand, its molecules being arranged in planar square [Zn(II)] and trigonal bipyramid [Sn(IV)] around the metal ions. NMR studies have revealed four-coordinated geometry in the solution. The complexes containing both Sn(IV) and Zn(II) are better antimicrobial agents as compared to the Zn-only analog.     

Synthesis of poly(N-aminoethyl)acrylamide chelating fiber and properties of concentration and separation of noble metal ions from samples

A new kind of poly(N-aminoethyl)acrylamide chelating fiber was synthesized from nitrilon (an acrylonitrile-based synthetic fiber) and used for the concentration and separation of traces of noble metal ions from solution. The results showed that 16-80 ng ml (1) of Au(III), Pt(IV), Pd(IV), Ir(IV), Ru(III) and Rh(III) can be quantitatively concentrated by the fiber up to a flow rate of 20 ml min (-1) at pH 3, and can be desorbed quantitatively with an eluting agent from the fiber column with recoveries of 96-100%. For a fiber reused 10 times, the recoveries of these ions were still over 94%, and a 100-1000 times excess of Fe(III), Al(III), Ca(II), Mg(II), Ni(II), Co(II), Cu(II) and Zn(II) caused no interference in the determination of these ions by inductively-coupled plasma atomic emission spectrometry. The capacities of the fiber for the analytes were in the range 0.80-2.62 mol g(-1), The relative standard deviation of the method was between 0.02% and 2.6%. Recoveries of a standard added to a real sample were 96.8-99.2%. The average error for the analysis by this method for a powder sample was 3.5%. The IR spectra of the analyte-bearing fiber showed that these ions coordinated to nitrogen sites in the fiber.     

Efficient Synthesis for a Wide Variety of Patellamide Derivatives and Phosphatase Activity of Copper-Patellamide Complexes

Copper complexes of patellamides have shown catalytic activity in a variety of reactions but their biological function remains unknown. There are significant differences between the natural macrocycles and synthetic analogues in the various catalytic activities. It therefore is essential to be able to perform in vivo and ex vivo reference measurements with the natural patellamide macrocycles, very similar derivatives and a large range of synthetic analogues. The preparative method described allows for a highly adaptable synthetic process producing building blocks for a large range of patellamide derivatives: apart from natural compounds, a new synthetic patellamide was prepared that does not have any substituents at any of the four heterocycles. Together with the variation of substituents at the aliphatic backbone, this allowed to elucidate the catalytic activity for phosphoester hydrolysis as a function of the structure and dynamics of the dicopper(II)-patellamide complexes, both by experiment and DFT-based mechanistic studies.     

Synthesis and properties of transition and lanthanide complexes with benzyl monohydrazone-3-hydrazine- 4-benzyl-6-phenyl pyridazine ligand (BHP)

Synthesis and characterization of benzyl-monohydrazone-3-hydrazino-4-benzyl-6-phenyl pyridazine (BHP) and its complexes with copper(II), nickel(II), cobalt(II), zinc(II), manganese(II), cadmium(II), thorium(IV), dioxyuranium(VI), samarium(III) and erbium(III) are presented. The protonation equilibrium of BHP ion and complex formation equilibrium with the metal ions have been studied by potentiometry in 75% (v/v) dioxane-water and 0.10M KNO₃ at different temperatures (10, 20, 30 and 40°C). A series of mononuclear complexes [ML _n ]^{(1? z )+} (L^? =?BHP and n =?1 ??z) were found in solution and their formation constants, enthalpies and entropies were determined.

The solid metal complexes and corresponding thermal products were elucidated by elemental analysis, conductance, IR and electronic spectra, magnetic moments, ¹H NMR and TG-DSC measurements as well as by mass spectroscopy. The use of BHP as analytical reagents for the determination of copper(II), nickel(II) and cobalt(II) as well as extracting agents for these metal ions are discussed.     

Oligoagarose-Graft-Polycaprolactone Copolymers: Synthesis and Characterization

In this paper, we combine hydrophilic oligoagarose (DP_n = 10–15), issued from enzymatic degradation of the natural biopolymer agarose, with polycaprolactone, a synthetic biodegradable and hydrophobic polyester. To synthesize these amphiphilic graft copolymers, we use partially acetylated oligoagarose as macroinitiator in combination with tin (II) octanoate for the bulk polymerization of ε-caprolactone. The grafting was confirmed by NMR and SEC which showed a monomodal distribution. After removal of the acetyl protecting groups, copolymers with 30–60% free hydroxyl groups were soluble in water and insoluble in chloroform, thus indicating that they probably adopt micelle-like structures in aqueous solution with a PCL hydrophobic core and spherical oligoagarose side chains.     

Sustainable natural adsorbents for heavy metal removal from wastewater: lead sorption on pine bark (Pinus radiata D.Don)

Aqueous Pb(II) adsorption on pine bark (Pinus Radiata D.Don), an inexpensive and sustainable natural sorbent material, has been evaluated and the mechanism of metal retention characterized by scanning electron microscopy (SEM), diffuse reflectance infrared Fourier transform spectroscopy (DRIFTS) and X‐ray photoelectron spectroscopy (XPS). Bark pulp densities >1.5 g l^?1 achieve near 100% Pb(II) removal from aqueous solutions containing 100 mg l^?1 Pb(II). Adsorption rates increased with pulp density, although adsorption capacity diminished at high densities because of blockage of adsorption sites. The effects of washing and sulfuric acid activation were assessed and found to be less important than in previous metal sorption studies. Pb(II) sorption takes place mainly at the lignocellulosic C―O groups, with adsorption at phenolic sites appearing to be most significant. © 2016 The Authors. Surface and Interface Analysis published by John Wiley & Sons, Ltd.