Asymmetric oxidation and determination of the configurations of an optically pure sulfoxide and an I-menthoxysulfonium salt of 1,9-bis(methylthio)dibenzothiophene by x-ray crystallographic analysis

1,9-Bis(methylthio)dibenzothiophene (1a) was treated with one equivalent of bromine and pyridine in the presence of l-menthol and then with aqueous sodium hydroxide to give optically active 1-(methylsulfinyl)-9-(methylthio)dibenzothiophene (2a) enriched by the S isomer (ee: 57%). The configuration of optically pure sulfoxide (2a) was determined by X-ray crystallographic analysis to be the S configuration at the sulfinyl sulfur atom. On the other hand, 1-(methyl-l-menthoxysulfonio)-9-(methylthio)dibenzothiophene tetrafluoroborate (4a) was isolated as an intermediate of this asymmetric oxidation in an optically pure form, as yellow crystals. The absolute configuration of this sulfonium salt (4a) was verified by X-ray crystallographic analysis as the R configuration. Optically pure sulfonium salt (4a) also gave partially optically active sulfoxide (2a) with net inversion on its hydrolysis. It was suggested that the hydrolysis reaction of the sulfonium salt (4a) accordingly proceeds, not only via a sulfurane having a simple S_N2 type of geometry but also by a front side attack ofhydroxide anion, with respect to the l-menthoxy group, on sulfur, and the sequential elimination of the l-menthoxy group from the tetracoordinated intermediate. © 1996 John Wiley & Sons, Inc.     

The solvent dimethyl sulfoxide

The dipolar aprotic solvent dimethyl sulfoxide is liquid over a wide range of temperatures, is a strong electron donor, and has a high polarity. It is therefore an excellent and selective solvent for many organic and even polymeric compounds, and can enter into H-bonding and dipole-dipole association. The structure of dimethyl sulfoxide, with a “hard” oxygen atom and a “soft” sulfur atom, leads to good solvation of cations and poor solvation of anions. Mixtures of alkoxides with dimethyl sulfoxide are therefore among the most strongly basic systems in organic chemistry, and are excellently suited for the deprotonation of weakly acidic OH, NH, and CH bonds, for eliminations, and for the initiation of polymerizations.     

Comparison of experimental and computationally predicted sulfoxide bond dissociation enthalpies

The accurate estimation of S-O bond dissociation enthalpies (BDE) of sulfoxides by computational chemistry methods has been a significant challenge. One of the primary causes for this challenge is the well-established requirement of including high-exponent d functions in the sulfur basis set for accurate energies. Unfortunately, even when high-exponent d functions were included in Pople-style basis sets, the relative strength of experimentally determined S-O BDE was incorrectly predicted. The aug-cc-pV(n+d)Z basis sets developed by Dunning include an additional high-exponent d function on sulfur. Thus, it was expected that the aug-cc-pV(n+d)Z basis sets would improve the prediction of sulfoxide S-O BDE. This study presents the S-O BDE predicted by B3LYP, CCSD, CCSD(T), M05-2X, M06-2X, and MP2 combined with aug-cc-pV(n+d)Z, aug-cc-pVnZ, and Pople-style basis sets. The accuracy of these predictions was determined by comparing the computationally predicted values to the experimentally determined S-O BDE. Values within experimental error were obtained for dialkyl sulfoxides when the S-O BDEs were estimated using an isodesmic oxygen transfer reaction at the M06-2X/aug-cc-pV(T+d)Z level of theory. However, the S-O BDE of divinyl sulfoxide was overestimated by this method.     

Electronic state of the dimethyl sulfoxide reductase active site

Computations suggest that in contrast with small models the active site geometry of reduced dimethyl sulfoxide reductase might prefer a triplet over a singlet electronic state.     

X-ray absorption spectroscopic characterization of the molybdenum site of Escherichia coli dimethyl sulfoxide reductase

Structural studies of dimethyl sulfoxide (DMSO) reductases were hampered by modification of the active site during purification. We report an X-ray absorption spectroscopic analysis of the molybdenum active site of Escherichia coli DMSO reductase contained within its native membranes. The enzyme in these preparations is expected to be very close to the form found in vivo. The oxidized active site was found to have four Mo-S ligands at 2.43 A, one Mo=O at 1.71 A, and a longer Mo-O at 1.90 A. We conclude that the oxidized enzyme is a monooxomolybdenum(VI) species coordinated by two molybdopterin dithiolenes and a serine. The bond lengths determined for E. coli DMSO reductase are very similar to those determined for the well-characterized Rhodobacter sphaeroides DMSO reductase, suggesting similar active site structures for the two enzymes. Furthermore, our results suggest that the form found in vivo is the monooxobis(molybdopterin) species.     

Development of a liquid chromatography/tandem-mass spectrometry assay for the simultaneous determination of teneligliptin and its active metabolite teneligliptin sulfoxide in human plasma

Teneligliptin is a recently developed dipeptidyl peptidase-4 (DPP-4) inhibitor for the treatment of type 2 diabetes mellitus. To study simultaneous pharmacokinetics of teneligliptin and its major active metabolite, teneligliptin sulfoxide in human plasma, we developed and validated a LC-MS/MS method. The analytes were detected in the positive mode using multiple reaction monitoring (teneligliptin: m/z 427.2→243.1; teneligliptin-d₈: m/z 435.2→251.3; teneligliptin sulfoxide: m/z 443.2→68.2). The method demonstrated accuracy, precision, and linearity over the concentration range of 5 to 1000 ng/mL for teneligliptin and 2.5 to 500 ng/mL for teneligliptin sulfoxide. The developed method is the first fully validated method capable of simultaneous determination of teneligliptin and its active metabolite, teneligliptin sulfoxide in plasma. The suitability of the method was successfully demonstrated in terms of quantification of teneligliptin and teneligliptin sulfoxide pharmacokinetics in plasma samples collected from healthy volunteers. The measurement of plasma metabolite/parent ratio of teneligliptin was feasible by this method.     

Thiophene 1-oxides. V. Comparison of the crystal structures and thiophene ring aromaticity of 2,5-diphenylthiophene,its sulfoxide and sulfone

The detailed preparation of 2,5-diphenylthiophene 1-oxide (2) is reported as well as the comparative study of the crystal structures of 2,5-diphenylthiophene, 1 , its sulfoxide 2 and sulfone 3 obtained by X-ray diffraction. This work represents the first experimental study of a complete heterocyclic series, including a thiophene derivative, and the corresponding sulfoxide and sulfone. On the basis of the geometrical parameters, the first unequivocal experimental parameters obtained for a thiophene 1-oxide derivative, we have also examined the evolution of the aromatic character of the thiophene ring when oxidizing the sulfur atom to the sulfoxide and the sulfone. Paolini's bond orders and Julg and Francois's aromaticity indices have also been calculated for the three compounds and compared to those previously calculated for related thiophene derivatives by semi-empirical or ab initio methods [6], [7]. All the data examined showed that, in spite of its non planarity, the thiophene ring of 2,5-diphenylthiophene 1-oxide 2 could still exhibit some de localization of its p electrons indicating a certain degree of aromaticity lower than in thiophene 1 but higher than in the sulfone 3 .     

Crystal and molecular structure and determination of absolute configuration of two enantimers of methoxycarbonylmethyl carboxymethyl sulfoxide

Crystal and molecular structures of two enantiomers of methoxycarbonylmethyl carboxymethyl sulfoxide 2 ( 2(−) and 2(+) ) have been determined by X-ray methods. Crystals of 2 are orthorhombic, space group P2₁2₁2₁, Z = 4, with a = 5.1900(4) Å, b = 8.7960(7) Å, and c = 18.489(2) Å in 2(−) and a = 5.1897(7) Å, b = 8.787(1) Å, and c = 18.520(2) Å in 2(+). Structures 2(−) and 2(+) were refined to R factors equal to 0.041 and 0.052, respectively. The absolute configuration at the sulfur atom in enantiomer 2(−) with [α]equation/tex2gif-stack-1.gif = −20° (MeOH) is R_s. (In 2(+) , where [α]equation/tex2gif-stack-2.gif equals + 20° (MeOH), the absolute configuration at S atom is S_s.) In compounds 2(−) and 2(+) , a strong intermolecular hydrogen bond O3 H3 … O1 occurs.     

Kinetics and mechanism of oxidation of dimethyl sulfoxide by chloramine-T in aqueous solution

The kinetics of oxidation of dimethyl sulfoxide (DMSO) by chloramine-T (CAT) is studied in HClO₄ and NaOH media with OsO₄ as a catalyst in the latter medium. In acid medium, the rate law is -d [CAT]/dt = k [CAT][DMSO][H⁺]. Alkali retards the reaction and the rate law takes the form -d [CAT]/dt = k [CAT][DMSO][OsO₄]/[NaOH], but is reduced to -d [CAT]/dt = k [CAT][DMSO] at higher alkali concentrations. The reaction is subjected to changes in (a) ionic strength, (b) concentrations of added neutral salts, (c) concentrations of added reaction product, (d) dielectric constant, and (e) solvent isotope effect, and the subsequent effects on the reaction rate are studied. The reaction mechanism in acid medium assumes an electrophilic attack by the free acid RNHCl (CAT′) at the sulfur site in DMSO, forming a reaction intermediate which subsequently decomposes to dimethyl sulfone on hydrolysis. Formation of a cyclic complex between RNHCl and OsO₄ which interacts with the substrate in a slow step explains the observed results in alkaline medium. The simplification of the rate equation at higher alkali concentrations is attributed to a direct reaction between chloramine-T and the substrate.     

On the structures of alpha-lithiated sulfoxide,sulfone and sulfonium systems. Implications for the stereochemistry of functionalization of carbon atoms adjacent to sulfur

The fully optimized geometries of C-S torsional isomers of LiCH₂SHO, LiCH₂SHO₂, and LiCH₂SH₂⁺ have been computed at the 3–21G^* level. The global minima of the sulfoxide and sulfone contain intramolecular LiO bonds. In the presence of Li⁺, intermolecular LiO bonding alters the structure of the alpha-lithiated sulfoxide, and the CLi bond is antiperiplanar to oxygen. The alpha-lithiated sulfonium cation exhibits no unusual conformational features, and a low barrier to CS torsion. The implications of these results upon the stereochemistry of functionalization of a carbon atom adjacent to sulfur by a lithiation-quenching sequence are discussed.     

Synthesis and properties of poly(dipropargyl sulfoxide)

The preparation and cyclopolymerization of dipropargyl sulfoxide were studied. The polymerization of dipropargyl sulfoxide was carried out by various transition metal catalysts. WCl₆–EtAlCl₂, MoCl₅, and PdCl₂ catalyst systems were very effective. The resulting poly(dipropargyl sulfoxide) structures were characterized by NMR (¹H and ¹³C), IR, and elemental analysis to have conjugated polyene units. Poly(dipropargyl sulfoxide) prepared by PdCl₂ was mostly soluble in organic solvents such as DMF and DMSO. Thermal and oxidative properties of poly(dipropargyl sulfoxide) were also studied. The electrical conductivity of iodine-doped poly(dipropargyl sulfoxide) was 5.2 × 10^?2 Ω^?1 cm^?1. Comparisons of poly(dipropargyl sulfoxide) properties with other similar polymers from dipropargyl sulfur derivatives such as dipropargyl sulfide and dipropargyl sulfone were also carried out. © 1993 John Wiley & Sons, Inc.     

Chromium pentacarbonyl complexes of some dihydro- and tetrahydro-thiophene derivatives: determination of the type of bonding of chromium to a sulfoxide moiety

Chromium pentacarbonyl complexes of some dihydro- and tetrahydro-thiophenes and their sulfoxides have been prepared. In the sulfide derivatives the chromium is readily seen to be attached to the sulfur atom. The sulfoxide functionality also acts as a ligand for chromium, and by means of IR and mass spectra and the ESCA technique it was tentatively concluded that chromium is bonded to the sulfur atom of the sulfoxide. This assignment was confirmed by an X-ray analysis of 2,5-dihydrothiophene-1-oxide chromium pentacarbonyl.     

Vibrational frequencies and structural determinations of divinyl sulfoxide

We present a detailed analysis of the structure and infrared spectra of divinyl sulfoxide. The vibrational frequencies of the divinyl sulfoxide molecule were analyzed using standard quantum chemical techniques. Frequencies were calculated at the MP2 and DFT levels of theory using the standard 6-311G* basis set. The molecule exists normally in a C(s) configuration. High-energy forms of divinyl sulfoxide with C(S) and C(1) symmetries also exist.     

Absolute configuration and predominant conformations of 1,1-dimethyl-2-phenylethyl phenyl sulfoxide

The absolute configuration of the (+)-1,1-dimethyl-2-phenylethyl phenyl sulfoxide is determined to be (R), using three different chiroptical spectroscopic methods, namely vibrational circular dichroism (VCD), electronic circular dichroism (ECD) and specific rotation. Four solution conformations are identified for 1,1-dimethyl-2-phenylethyl phenyl sulfoxide. In each of the methods used, experimental data for the enantiomers of 1,1-dimethyl-2-phenylethyl phenyl sulfoxide were measured in the solution phase and concomitant quantum mechanical calculations of corresponding properties were carried out using density functional theory with B3LYP functional and 6-31G* and 6-31+G basis sets. Additional VCD and ECD calculations were also undertaken with 6-311G(2d,2p) basis set. A comparison of theoretically predicted data with the corresponding experimental data has allowed us to elucidate the absolute configuration and predominant conformations of (+)-1,1-dimethyl-2-phenylethyl phenyl sulfoxide.     

Crystallographic evidence of Gly‐d,l‐Met oxidation to its sulfoxide in the presence of gold(III): solid solution of the racemic mixture of two diastereoisomers

Crystallographic analysis of a solid solution of two diastereoisomers, i.e. ({(1S,R)‐1‐carboxy‐3‐[(R,S)‐methylsulfinyl]propyl}aminocarbonyl)methanaminium tetrachloridoaurate(III) and ({(1S,R)‐1‐carboxy‐3‐[(S,R)‐methylsulfinyl]propyl}aminocarbonyl)methanaminium tetrachloridoaurate(III), (C₇H₁₅N₂O₄S)[AuCl₄], has shown that in the presence of gold(III), the methionine part of the Gly‐d ,l ‐Met dipeptide is oxidized to sulfoxide, and no coordination to the Au^III cation through the S atom of the sulfoxide is observed. In view of our observation, literature reports that methionine acts as an N,S‐bidentate donor ligand forming stable gold(III) complexes require verification. Moreover, it has been demonstrated that crystallization of the oxidation product leads to a substantial 77:23 excess of both S‐methionine/R‐sulfoxide and R‐methionine/S‐sulfoxide over S‐methionine/S‐sulfoxide and R‐methionine/R‐sulfoxide. The presence of two different diastereoisomers at the same crystallographic site is a source of static disorder at this site.     

Enzyme-promoted desymmetrization of bis(2-hydroxymethylphenyl) sulfoxide as a route to tridentate chiral catalysts

The desymmetrization of prochiral bis(2-hydroxymethylphenyl) sulfoxide 3 was efficiently performed via acetylation promoted by commonly available lipases. Two lipases, namely, CAL-B and LPL proved particularly efficient to give 2-acetoxymethylphenyl 2-hydroxymethylphenyl sulfoxide 4 in up to 98% yield and with up to 98% ee. On the basis of an X-ray analysis, the absolute configuration of 4 was determined as (+)-(R). The enantiomerically pure product 4 was then transformed into a series of enantiomerically pure diastereomeric 2-aminomethylphenyl 2-hydroxymethylphenyl sulfoxides 8 in which the amino groups originated from enantiomerically pure amines having additional C-stereogenic centres. Compounds 8 were examined as possible tridentate chiral catalysts in a reference reaction of diethylzinc with benzaldehyde to give the expected product, 1-phenylpropan-1-ol, in moderate yields and with ee’s of up to 50%.     

Synthesis of polyacetylene with sulfoxide functions

Polyacetylene functionalized by sulfoxide groups was synthesized from poly(methyl vinyl sulfoxide) by the elimination of methanesulfenic acid under the action of a strong base at 20—50 °C.__________Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 3, pp. 774–776, March, 2005.     

Reduction mechanism in class A methionine sulfoxide reductases: a theoretical chemistry investigation

Ab initio calculations at the B3LYP/6–311 ++G(2df,2p) and B3LYP/6–31G(d) level have been carried out to investigate the reaction mechanism of methionine sulfoxide reductases of class A. These enzymes reduce oxidized methionine in vivo and therefore play an important role in repairing protein damage caused by the oxidative stress. Our calculations have been carried out for a model reaction in a model active site. Several reaction mechanisms have been explored that can roughly be described as (2H⁺ + 2e⁻) or (H⁺ + e⁻). The results suggest that the actual reaction mechanism is of the (2H⁺ + 2e⁻) type corresponding to a more or less asynchronous-concerted double-proton transfer reaction leading to the formation of methionine (dimethylthioether in our model) and a sulfenic acid Cys-SOH. The Michaelis complex would involve one deprotonated Cys and one protonated Glu residues in the active site, this protonation state being mandatory to stabilize the sulfoxide substrate. Then, proton transfer from Glu to the substrate takes place, followed by proton transfer from one Tyr residue and fast reorganization of the system. The overall activation energy barrier is estimated to fall in the range 7–9 kcal/mol, much lower than the predicted barrier in DMSO solution (29.6 kcal/mol) reported before.     

Simultaneous densitometric determination of anthelmintic drug albendazole and its metabolite albendazole sulfoxide by HPTLC in human plasma and pharmaceutical formulations

A new, simple, accurate and precise high‐performance thin‐layer chromatographic method has been developed and validated for simultaneous determination of an anthelmintic drug, albendazole, and its active metabolite albendazole, sulfoxide. Planar chromatographic separation was performed on aluminum‐backed layer of silica gel 60G F₂₅₄ using a mixture of toluene–acetonitrile–glacial acetic acid (7.0:2.9:0.1, v /v/v) as the mobile phase. For quantitation, the separated spots were scanned densitometrically at 225 nm. The retention factors (R _f) obtained under the established conditions were 0.76 ± 0.01 and 0.50 ± 0.01 and the regression plots were linear (r ² ≥ 0.9997) in the concentration ranges 50–350 and 100–700 ng/band for albendazole and albendazole sulfoxide, respectively. The method was validated for linearity, specificity, accuracy (recovery) and precision, repeatability, stability and robustness. The limit of detection and limit of quantitation found were 9.84 and 29.81 ng/band for albendazole and 21.60 and 65.45 ng/band for albendazole sulfoxide, respectively. For plasma samples, solid‐phase extraction of analytes yielded mean extraction recoveries of 87.59 and 87.13% for albendazole and albendazole sulfoxide, respectively. The method was successfully applied for the analysis of albendazole in pharmaceutical formulations with accuracy ≥99.32%.     

Synthesis of C3-substituted enantiopure 2-(p-tolylsulfinyl)-furans: the sulfoxide group as a chiral inductor for furan dienes as precursors of a wide variety of chiral intermediates

(−)-(1R,2S,5R)-Menthyl (S_S)-p-toluenesulfinate and its enantiomer are a common source for a chiral sulfoxide group in organic synthesis, by means of nucleophilic substitution. The replacement of the menthyloxy group, with complete inversion of configuration at the sulfur center of the chiral sulfoxide, allows the inclusion of this organic function into numerous substrates, with defined stereochemistry and high enantiomeric purity. Nine C3-substituted, enantiomerically pure, 2-sulfinylfurans were prepared by this synthetic methodology with moderate to high yields. These enantiopure C3-substituted 2-sulfinylfurans can be used as chiral dienes for [4+3] cycloaddition reactions and in other chemical transformations, in which π-facial selectivity should be induced in order to obtain enantioselective reactions.