Static investigation of adsorption and hetero‐diffusion of copper,silver, and gold adatoms on the (111) surface

In this work, we have used the static molecular simulations combined with an interatomic potential derived from the embedded‐atom method to study the adsorption and hetero‐diffusion on the (111) surface of Cu, Ag, and Au adatoms by using LAMMPS code. The investigation is performed for six heterogeneous systems such as Ag/Au(111), Ag/Cu(111), Au/Ag(111), Au/Cu(111), Cu/Ag(111), and Cu/Au(111). First, we have investigated the relaxation trends and the bond lengths of the atoms in the systems. The calculation results show that, the top layer spacing between the first and second layers of the Au(111), Ag(111), and Cu(111) substrates is contracted. This contraction is found to be more important in the Au(111) substrate. On the other hand, the strong reduction of the binding length is found in Au/Cu(111) for the different adsorption sites. In addition, the binding, adsorption, and static activation energies for all studied systems were examined. The results indicated that the binding and adsorption energies reached their maximum values in the Au/Cu(111) and Au/Ag(111) systems, respectively. Moreover, the static activation barriers for hopping diffusion on the (111) surfaces are found to be low compared with those found in the (100) and (110) surfaces. Therefore, our calculations showed that the difference in energy between the hcp and fcc sites on the (111) surfaces is very small. Copyright © 2017 John Wiley & Sons, Ltd.     

Morphology of gold nanoparticles synthesized by filamentous cyanobacteria from gold(I)-thiosulfate and gold(III)--chloride complexes

Plectonema boryanum UTEX 485, a filamentous cyanobacterium, has been reacted with aqueous Au(S(2)O(3))(2)(3)(-) and AuCl(4)(-) solutions ( approximately 400-550 mg/L Au) at 25-100 degrees C for up to 1 month and at 200 degrees C for 1 day. The interaction of cyanobacteria with aqueous Au(S(2)O(3))(2)(3)(-) promoted the precipitation of cubic (100) gold nanoparticles (<10-25 nm) at membrane vesicles and admixed with gold sulfide within cells and encrusted on the cyanobacteria, whereas reaction with AuCl(4)(-) resulted in the precipitation of octahedral (111) gold platelets ( approximately 1-10 microm) in solutions and nanoparticles of gold (<10 nm) within bacterial cells. Functional groups imaged by negative ion TOF-SIMS on (111) faces of the octahedral platelets were predominantly Cl and CN, with smaller amounts of C(2)H and CNO.     

First‐Principles Study toward CO Adsorption on Au/Ni Surface Alloys

The introduction of a second metal, gold, into a nickel matrix can effectively improve the catalytic performance and thermal stability of the catalysts toward steam reforming of methane. To investigate the effect of Au on the adsorption properties and electronic structure of the Ni(111) surface, we chose CO as a probe molecule and examined CO adsorption on various Au/Ni surfaces. It was revealed that Au addition weakened the absorbate–substrate interactions on the Ni(111) surface. With increasing gold concentration, the binding energy declines further. The variation of the binding energies has been interpreted by exploring the electronic structure of surface nickel atoms. The effect of gold can be quantitatively characterized by the slopes of the fitting equations between the binding energy and the number of gold atoms surrounding the adsorption site. Our results show that the binding energy at top sites can be approximately estimated by counting the number of surrounding gold atoms. On one specific surface, the relative magnitude of the binding energy can be simply judged by the distance between gold and the geometrical center of the adsorption site. This empirical rule holds true for C, H, and O adsorption on the Au/Ni surface. It may be applicable to a system in which a doped atom of larger atomic size is incorporated into the host metal surface by forming a surface alloy.     

Effect of molecular conformations on the adsorption behavior of gold-binding peptides

Despite extensive recent reports on combinatorially selected inorganic-binding peptides and their bionanotechnological utility as synthesizers and molecular linkers, there is still only limited knowledge about the molecular mechanisms of peptide binding to solid surfaces. There is, therefore, much work that needs to be carried out in terms of both the fundamentals of solid-binding kinetics of peptides and the effects of peptide primary and secondary structures on their recognition and binding to solid materials. Here we discuss the effects of constraints imposed on FliTrx-selected gold-binding peptide molecular structures upon their quantitative gold-binding affinity. We first selected two novel gold-binding peptide (AuBP) sequences using a FliTrx random peptide display library. These were, then, synthesized in two different forms: cyclic (c), reproducing the original FliTrx gold-binding sequence as displayed on bacterial cells, and linear (l) dodecapeptide gold-binding sequences. All four gold-binding peptides were then analyzed for their adsorption behavior using surface plasmon resonance spectroscopy. The peptides exhibit a range of binding affinities to and adsorption kinetics on gold surfaces, with the equilibrium constant, Keq, varying from 2.5x10(6) to 13.5x10(6) M(-1). Both circular dichroism and molecular mechanics/energy minimization studies reveal that each of the four peptides has various degrees of random coil and polyproline type II molecular conformations in solution. We found that AuBP1 retained its molecular conformation in both the c- and l-forms, and this is reflected in having similar adsorption behavior. On the other hand, the c- and l-forms of AuBP2 have different molecular structures, leading to differences in their gold-binding affinities.     

In-situ infrared study of the adsorption and oxidation of oxalic acid at single-crystal and thin-film gold electrodes: a combined external reflection infrared and ATR-SEIRAS approach

The adsorption and oxidation of oxalic acid at gold electrodes were studied by in-situ infrared spectroscopy. External reflection experiments carried out with gold single-crystal electrodes were combined with internal reflection (ATR-SEIRAS) experiments with gold thin-film electrodes. These gold thin films, with a typical thickness of ca. 35 nm, were deposited on silicon substrates by argon sputtering. As previously reported for evaporated gold films, the voltammetric curves obtained in sulfuric acid solutions after electrochemical annealing show typical features related to the presence of wide bidimensional (111) domains with long-range order. The in-situ infrared data collected for solutions of pH 1 confirmed the potential-dependent adsorption of either oxalate (Au(100)) or a mixture of bioxalate and oxalate (Au(111), Au(110), and gold thin films) anions in a bidentate configuration. The better signal-to-noise ratio associated with the SEIRA effect in the case of the gold thin-film electrodes allows the observation of the carbonyl band for adsorbed bioxalate that was not detected in the external reflection experiments. Besides, additional bands are observed between 2000 and 3000 cm(-)(1) that can be tentatively related to the formation of hydrogen bonds between neighboring bioxalate anions. The intensities of these bands decrease with increasing solution pH values, disappearing for pH 3 solutions in which adsorbed oxalate anions are the predominant species. The analysis of the intensities of the nu(s)(O-C-O) and nu(C-OH) + delta(C-O-H) bands for adsorbed oxalate and bioxalate, respectively, suggests that the pK(a) for the surface equilibrium between these species is significantly lower than that for the solution equilibrium.     

Selective growth of Au nanoparticles on (111) facets of Cu2O microcrystals with an enhanced electrocatalytic property

The selective growth of Au nanoparticles on (111) facets of truncated octahedral and cuboctahedral Cu(2)O crystals has been achieved by exploiting the differences in the standard potential between AuCl(4)(-)/Au and Cu(2+)/Cu(2)O pairs and in surface energies between (111) and (100) planes. The density and size of Au nanoparticles can be controlled by tuning the concentration of the gold precursor. Truncated octahedral Cu(2)O-Au nanocomposites have a 10 times higher electrochemically catalytic activity toward H(2)O(2) reduction than do pure Cu(2)O crystals. The enhanced catalysis may be derived from the polarization of Au NPs at the interface, which makes Cu(2)O more active for H(2)O(2) reduction.     

Geometrical Structure of the Gold–Iron(III) Oxide Interfacial Perimeter for CO Oxidation

The geometrical structure of the Au‐Fe₂O₃ interfacial perimeter, which is generally considered as the active sites for low‐temperature oxidation of CO, was examined. It was found that the activity of the Au/Fe₂O₃ catalysts not only depends on the number of the gold atoms at the interfacial perimeter but also strongly depends on the geometrical structure of these gold atoms, which is determined by the size of the gold particle. Aberration‐corrected scanning transmission electron microscopy images unambiguously suggested that the gold particles, transformed from a two‐dimensional flat shape to a well‐faceted truncated octahedron when the size slightly enlarged from 2.2 to 3.5 nm. Such a size‐induced shape evolution altered the chemical bonding environments of the gold atoms at the interfacial perimeters and consequently their catalytic activity. For Au particles with a mean size of 2.2 nm, the interfacial perimeter gold atoms possessed a higher degree of unsaturated coordination environment while for Au particles with a mean size of 3.5 nm the perimeter gold atoms mainly followed the atomic arrangements of Au {111} and {100} facets. Kinetic study, with respect to the reaction rate and the turnover frequency on the interfacial perimeter gold atom, found that the low‐coordinated perimeter gold atoms were intrinsically more active for CO oxidation. ¹⁸O isotopic titration and Infrared spectroscopy experiments verified that CO oxidation at room temperature occurred at the Au‐Fe₂O₃ interfacial perimeter, involving the participation of the lattice oxygen of Fe₂O₃ for activating O₂ and the gold atoms for CO adsorption and activation.     

Theoretical study of NO adsorption on gold surfaces

The activities of neutral,anionic,and cationic Au(111),Au(100),and Au(310) surfaces,as well as an Au adatom on Au(111) surface towards NO adsorption have been studied by performing density functional theory calculations.It was found that the activity of gold increases as the coordination number of the gold atoms decreases,and that the cationic surfaces are generally more active than the neutral and anionic surfaces.The activity of Au surfaces towards NO adsorption is attributable to the presence of low coor...     

Effect of spin polarization for hydrogen adsorbed on Si(111)(1×1) surface: First‐principles calculations

The role of spin polarization on adsorption of atomic and molecular hydrogen on Si(111)(1×1) surface is examined by comparing the results of the local spin density approximation (LSD) and those of the local density approximation (LDA). A large improvement of the adsorption energies (around 0.8 eV/H) was found for the H atom adsorbed on Si(111)(1×1) surface. The inclusion of spin polarization reduces the overbinding between the H atom and the silicon surface and its effect is much more pronounced when the H atom is far away from the surface. Despite of the large changes in the adsorption energies, the main character of the potential energy surface of the H atom on Si(111)(1×1) surface is retained. An opposite effect is found in the charge‐density‐transfer map of LSD results as compared to LDA results for the H atom approaching the surface through the H3 path, in which the H atom loses electrons rather than gains electrons from the surface. The fact that the H atom tends to lose electrons in the silicon bulk has already been reported by the experimental studies for the behavior of the H atom in the p‐type silicon. For the molecular hydrogen on Si(111)(1×1) surface, the effect of the spin polarization is so small that it can be neglected. © 2000 John Wiley & Sons, Inc. Int J Quant Chem 79: 47–55, 2000     

Coverage effects and the nature of the metal-sulfur bond in S/Au(111): high-resolution photoemission and density-functional studies

The bonding of sulfur to surfaces of gold is an important subject in several areas of chemistry, physics, and materials science. Synchrotron-based high-resolution photoemission and first-principles density-functional (DF) slab calculations were used to study the interaction of sulfur with a well-defined Au(111) surface and polycrystalline gold. Our experimental and theoretical results show a complex behavior for the sulfur/Au(111) interface as a function of coverage and temperature. At small sulfur coverages, the adsorption of S on fcc hollow sites of the gold substrate is energetically more favorable than adsorption on bridge or a-top sites. Under these conditions, S behaves as a weak electron acceptor but substantially reduces the density-of-states that gold exhibits near the Fermi edge. As the sulfur coverage increases, there is a weakening of the Au-S bonds (with a simultaneous reduction in the Au --> S charge transfer and a modification in the S sp hybridization) that facilitates changes in adsorption site and eventually leads to S-S bonding. At sulfur coverages above 0.4 ML, S(2) and not atomic S is the more stable species on the gold surface. Formation of S(n)(n > 2) species occurs at sulfur coverages higher than a monolayer. Very similar trends were observed for the adsorption of sulfur on polycrystalline surfaces of gold. The S atoms bonded to Au(111) display a unique mobility/reactivity not seen on surfaces of early or late transition metals.     

Structure and bonding of ethoxy species adsorbed on transition metal surfaces

The interaction of the ethoxy radical with Cu(111), Ag(111), Pd(111) and Au(111) has been studied using a periodic density functional approach. The most stable adsorption site is the fcc with adsorption energies in the 1.1–2.2 eV interval. All analyses consistently indicate that ethoxy becomes negatively charged, that the presence of ethoxy slightly perturbs the electronic structure of the metallic surface, that the interaction is essentially of electrostatic character and not directional predicting a rather mobile species. The calculated adsorption energies are found to correlate almost linearly with the total net charge on the ethoxy moiety thus confirming that the electrostatic interactions dominate the bonding between this organic species and the underlying metallic surfaces.     

密度泛函理论研究十二烷硫醇在Au(111)面上的吸附

采用第一性原理方法研究了十二烷硫醇(C₁₂H₂₅SH)分子在Au(111)面上未解离和解离吸附的结构、能量和吸附性质,在此基础上分析判断长链硫醇分子在Au(111)面吸附时S―H键的解离, 以及分子链长度对吸附结构和能量的影响. 计算了S原子在不同位置以不同方式吸附的系列构型, 结果表明在S―H键解离前和解离后,均存在两种可能的表面结构, 直立吸附构型和平铺吸附构型; 未解离的C₁₂H₂₅SH分子倾向于吸附在top位, 吸附能为0.35-0.38 eV; H原子解离后C₁₂H₂₅S基团倾向于吸附在bri-fcc位, 吸附能量为2.01-2.09 eV. 比较分析未解离吸附和解离吸附, 发现C₁₂H₂₅SH分子未解离吸附相较于解离吸附要稳定, 未解离吸附属于弱化学吸附.局域电子态密度和差分电荷密度分析进一步验证了S―H解离后S原子与表面之间成键的数目增加, 而且键合更强. 同时我们发现长链硫醇的吸附能量较短链硫醇的吸附能量略大, S原子与表面Au原子之间的距离略小.     

A Periodic Density Functional Study on Adsorption Properties of Methoxy on Au（111） Surface

1INTRODUCTION Methoxy(CH3O)has been identified as the first intermediate in the decomposition of methanol on extensive list of clean transition metal surfaces,such as Ni(100)[1],Cu(100)[2,3],Cu(111)[4],Ag(111)[5],Au(110)[6],Pd(111)[7]and Ru(0001)[8].The electronic structure of the metal is a determining factor in OH bond scission.In fact,group IB clean surfaces have shown very low activity towards this reaction,al-though there are reports on low amounts of methoxy formed on clean Cu(…     

Reaction of SO2 with AuCeO2(111): importance of O vacancies in the activation of gold

Synchrotron-based high-resolution photoemission was used to study the adsorption and chemistry of SO(2) on AuCeO(2)(111) and AuO(x)CeO(2) surfaces. The heat of adsorption of the molecule on Au nanoparticles supported on stoichiometric CeO(2)(111) was 4-7 kcalmol larger than on Au(111). However, there was negligible dissociation of SO(2) on the AuCeO(2)(111) surfaces. The full decomposition of SO(2) was observed only after introducing O vacancies in the ceria support. AuO(x)CeO(2) surfaces were found to be much less chemically active than AuCeO(2)(111) or AuCeO(2-x)(111) surfaces. The active sites in {Au + AuO(x)}ceria catalysts should involve pure gold nanoparticles in contact with O vacancies.     

Electrocapillarity behavior of Au111 in SO4(2-) and F-

We present the first set of results measuring the change in interfacial free energy and surface stress for Au(111) electrodes in an electrolyte containing a nonspecifically adsorbing anion and compare this behavior to that in an electrolyte containing an anion known to undergo specific adsorption. Generally, we find that the surface stress is more sensitive to changes in electrode potential and adsorption then the interfacial free energy. The results obtained in fluoride electrolytes are compared to the predictions of a thermodynamic analysis.     

Dynamic in situ characterization of organic monolayer formation via a Novel substrate-mediated mechanism

Ultrahigh vacuum scanning tunneling microscopy data investigating octylsilane (C8H17SiH3) monolayer pattern formation on Au(111) are presented. The irregular monolayer pattern exhibits a 60 A length scale. Formation of the octylsilane monolayer relaxes the Au(111) 23 x square root3 surface reconstruction and ejects surface Au atoms. Au adatom diffusion epitaxially extends the Au(111) crystal lattice via step edge growth and island formation. The chemisorbed monolayer covers the entire Au surface at saturation exposure. Theoretical and experimental data suggest the presence of two octylsilane molecular adsorption phases: an atop site yielding a pentacoordinate Si atom and a surface vacancy site yielding a tetracoordinate Si atom. Theoretical simulations investigating two-phase monolayer self-assembly dynamics on a solid surface suggest pattern formation results from strain-induced spinodal decomposition of the two adsorption phases. Collectively, the theoretical and experimental data indicate octylsilane monolayer pattern formation is a result of interfacial Au-Si interactions and the alkyl chains play a negligible role in the monolayer pattern formation mechanism.     

Electrochemical evaluation of lectin-sugar interaction on gold electrode modified with colloidal gold and polyvinyl butyral

In this work, ConA and CramoLL lectins were immobilized on gold nanoparticles (AuNp) with polyvinyl butyral (PVB), and adsorbed on the surface of gold (Au) electrodes. Electrochemical impedance spectroscopy (EIS), in the frequency range from 100mHz to 100KHz, and cyclic voltammetry (CV), from -0.2 to 0.7V, were performed on these electrodes, in phosphate buffer (PBS) solution containing 10mM K(3)[Fe(CN)(6)]/K(4)[Fe(CN)(6)] (1:1) mixture as a redox probe. EIS and CV measurements showed that redox probe reactions on the modified Au electrodes were partially blocked due to the adsorption of AuNp-ConA-PVB and AuNp-CramoLL-PVB. SEM images showed the presence of aggregates of AuNp-ConA on PVB spherules in a tridimensional structure on the surface of the Au electrode. Bovine serum albumin (BSA) was adsorbed on the AuNp-Lectin-PVB modified electrode in order to block the remaining free gold sites. Both EIS and CV techniques yielded results that confirm positive responses of the lectins to ovalbumin agglutination. These results indicate an improvement of the sensitivity for detection of sugars that can be applicable to construction of a biosensor sensitive to glycoproteins in solution.     

氢和硫原子在Pd、Au和Cu及PdAu、PdCu合金(111)表面吸附的密度泛函研究

用密度泛函理论研究了氢和硫原子在金属Pd、Au、Cu以及合金PdM3、Pd2M2 和Pd3M(111)表面的吸附(M=Au, Cu), 得到了覆盖率为0.25时最稳定的吸附位、结合能以及吸附前后表面的驰豫情况. 结果表明, 氢和硫均与Pd形成最稳定的吸附, Cu次之, Au的吸附最弱, 其在三种纯金属(111)表面的最稳定吸附位均为fcc位. 由于PdAu合金具有较大的晶格常数, Pd3Au 合金吸附氢的结合能甚至较纯Pd更大, 除此之外, 氢和硫在PdM合金表面的吸附基本随M组分的增加而减弱, 而最稳定的吸附位随金属种类和组成变化而变化. 根据计算得到的吸附结合能, 发现与PdCu合金相比, PdAu合金在Au含量较低(约25%, 摩尔分数)时, 氢和硫吸附的结合能下降较慢, 而Au含量较高(跃50%)时, 结合能迅速下降, 这表明含金量为25%-50%的PdAu合金有可能在保持相近透氢性能的同时, 比PdCu合金具有更好的抗硫毒性.     

Acetonitrile as Adsorbate or Solvent to Probe the Crystal Face Specificity of Metal–Water Interaction at Silver Electrode/Solution Interfaces

The crystal face specificity of metal–water interaction at Ag electrode/solution interfaces is investigated by using acetonitrile (ACN) as a probe molecule of the water interfacial structure or as a solvent in which water is a solute. Capacitance and voltammetric curves suggest that ACN is weakly adsorbed from aqueous solution on Ag in the order (111) > (100) > (110). Apparent inconsistencies of adsorption parameters are explained by the occurrence of two ACN adsorption modes: (i) directly on the metal surface and (ii) on the water layer adsorbed on the metal surface. Ag surface oxidation in ACN in the presence of variable amounts of water suggests that water has an inhibiting effect on Ag oxidation, the diminution of the water content in ACN leading to free anodic dissolution of the metal surface.     

Nitrogen/gold codoping of the TiO2(101) anatase surface. A theoretical study based on DFT calculations

The interaction between implanted nitrogen atoms, adsorbed gold atoms, and oxygen vacancies at the anatase TiO(2)(101) surface is investigated by means of periodic density functional theory calculations. Substitutional and interstitial configurations for the N-doping have been considered, as well as several adsorption sites for Au adatoms and different types of vacancies. Our total energy calculations suggest that a synergetic effect takes place between the nitrogen doping on one hand and the adsorption of gold and vacancy formation on the other hand. Thus, while pre-implanted nitrogen increases the adsorption energy for gold and decreases the energy required for the formation of an oxygen vacancy, pre-adsorbed gold or the presence of oxygen vacancies favors the nitrogen doping of anatase. The analysis of the electronic structure and electron densities shows that a charge transfer takes place between implanted-N, adsorbed Au and oxygen vacancies. Moreover, it is predicted that the creation of vacancies on the anatase surface modified with both implanted nitrogen and supported gold atoms produces migration of substitutional N impurities from bulk to surface sites. In any case, the most stable configurations are those where N, Au and vacancies are close to each other.