Dielectric properties and frequency response of self-assembled monolayers of alkanethiols

This paper presents dielectric properties of alkanethiol self-assembled monolayers (SAMs) under an ac electric field. Using a Hg-SAM/SAM-Hg junction, we measured the ac impedance of alkanethiol SAMs using a sinusoidal perturbation of 30 mV (peak-to-peak) with frequency ranging from 1 Hz to 1 MHz at zero bias. Semicircles at higher frequencies and at middle frequencies along with Warburg lines at lower frequencies were observed in complex plane impedance plots, that is, Nyquist plots. The frequency response of SAMs was analyzed by modeling the junction using an equivalent circuit and fitting the Nyquist plots. The semicircles at higher frequencies are attributed to the effect of the SAM/SAM interfaces, and the ones at middle frequencies are attributed to the effect of alkanethiol SAMs. The comparison in the plots of the imaginary part of the impedance Z against frequency for the bare Hg electrodes (in pure ethanal) and the SAM-covered Hg electrodes (in alkanethiol solution) supports the analysis. The Warburg lines are attributed to a certain ionic impurity. The dielectric loss spectra are further analyzed. Chain-length-dependent peaks, which correspond to different relaxation mechanisms, at higher frequencies and middle frequencies were observed in the spectra of the dissipation factor (tan delta vs frequency). The peaks move to small frequency with the increase of chain length of alkanethiols. Using a correlation of peak position with the chain length, we then derived active energies of 39-99 meV for alkanethiol SAMs of C7-C18 under an ac electric field.     

Solid-phase synthesis of alkanethiols for the preparation of self-assembled monolayers

Self-assembled monolayers (SAMs) of alkanethiols (ATs) on gold can be used to fabricate surfaces for nanoscience and biology. The chemical structure of the interface can be tailored simply by modifying the AT headgroup. To streamline access to different precursor ATs, we developed a general solid-phase synthetic route. A key feature of this route is the use of a modified resin containing an AT linker ("AT resin") because it minimizes purification steps. The precursor to the AT resin was prepared in five steps, and all of the synthetic intermediates are stable solids that can be purified by crystallization. Accordingly, the AT resin can be prepared on a multigram scale. The utility of the AT resin was evaluated by using it to generate a variety of ATs. For example, ATs presenting different types of integrin-binding ligands (linear and cyclic RGD derivatives) were prepared and used to form arrays of SAMs that support cell adhesion. Additionally, the AT resin also provides a starting point for the synthesis of ATs presenting reactive groups (e.g., an amine-reactive AT or a maleimide-containing alkanedisulfide) or protein immobilization tags (e.g., biotin-AT). Thus, our synthetic strategy provides a convenient and flexible means for the synthesis of the necessary building blocks for custom SAMs and SAM arrays.     

Parameters important in fabricating enzyme electrodes using self-assembled monolayers of alkanethiols.

The fabrication of enzyme electrodes using self-assembled monolayers (SAMs) has attracted considerable interest because of the spatial control over the enzyme immobilization. A model system of glucose oxidase covalently bound to a gold electrode modified with a SAM of 3-mercaptopropionic acid was investigated with regard to the effect of fabrication variables such as the surface topography of the underlying gold electrode, the conditions during covalent attachment of the enzyme and the buffer used. The resultant monolayer enzyme electrodes have excellent sensitivity and dynamic range which can easily be adjusted by controlling the amount of enzyme immobilized. The major drawback of such electrodes is the response which is limited by the kinetics of the enzyme rather than mass transport of substrates. Approaches to bringing such enzyme electrodes into the mass transport limiting regime by exploiting direct electron transfer between the enzyme and the electrode are outlined.     

Concentration dependence in microcontact printing of self-assembled monolayers (SAMs) of alkanethiols

This communication discusses the electrochemical assessment of self-assembled monolayers (SAMs) formed via microcontact printing with various concentrations of 1-hexadecanethiol (HDT) ink. At concentrations above 20 mM, the printed SAMs are shown to have very similar qualities to those formed from solution using much longer preparation procedures.     

Long-term variation of capacitance of self-assembled alkanethiol films at polycrystalline Au electrode

Capacitance of a self-assembled hexadecanethiol monolayer (SAM) film increased in aqueous solutions and decreased in ethanol solutions with the time on a few hours scale. The increase and the decrease were demonstrated to be ascribed, respectively, to desorption and adsorption of hexadecanethiol. They obeyed approximately the first-order rate law for the amount of the adsorbed thiol. The SAM is in equilibrium with the 5 μM hexadecanethiol ethanol solution. The SAM becomes stable when it is immersed in deionized water for a long time or heated in the deionized water.     

Interaction of alkanethiols with nanoporous cluster-assembled Au films

This article presents a study of the interaction of octadecanethiol molecules (C(18)) with nanoporous cluster-assembled gold films under a liquid environment based on a combined spectroscopic ellipsometry and X-ray photoelectron spectroscopy investigation. By comparing the optical response, following the deposition of C(18), of cluster-assembled films with varying degrees of porosity with that of flat surfaces and by resolving the corresponding features of the molecule-Au bond, we have been able to define the conditions that either favor molecular in-depth diffusion into the pores or promote the formation of a molecular self-assembled monolayer (SAM) restricted to the film surface. In the presence of abundant open pores, C(18) molecules strongly diffuse within the film interior and bind to the pore walls, whereas in the presence of porous films with less abundant open pores we have observed that the molecules tend to remain confined to the surface region, adopting a SAM-like configuration.     

Real time scanning force microscopy observation of a structural phase transition in self-assembled alkanethiols

We present here a new approach based on high resolution scanning force microscopy that permits molecular determination and frictional discrimination between coexisting molecular configurations of alkanethiols on Au(111). The method has allowed visualizing in real time a phase transition between two differently ordered self-assembled configurations, which spontaneously takes place with time at constant coverage and under ambient conditions. Frictional force measurements indicate that the molecular rearrangement observed occurs via an order-disorder-order process.     

Imaging photoelectron transmission through self-assembled monolayers: the work-function of alkanethiols coated gold

In this paper, we present a new approach for studying the electronic properties of self-assembled monolayers and their interaction with a conductive substrate, the low-energy photoelectron imaging spectroscopy (LEPIS). LEPIS relies on imaging of photoelectrons ejected from a conductive substrate and subsequently transmitted through organic monolayers. Using this method, we measure the relative work-function of alkanethiols of different length on gold substrate, and we are able to follow the changes occurring when the surface coverage is varied. We also computed the work-function of model alkanethiols using a plane-wave density functional theory approach, in order to demonstrate the correlation between changes in the work-function with the monolayer organization and density.     

Comparative study of monolayers self-assembled from alkylisocyanides and alkanethiols on polycrystalline Pt substrates

This paper compares the properties of self-assembled monolayers (SAMs) derived from octadecylisocyanide (ODI) and octadecanethiol (ODT) on polycrystalline Pt substrates. Both monolayers formed at a similar rate using 1.0 mM solutions in ethanol and achieved a thickness of 22-23 A after 24 h as determined by ellipsometry measurements. The advancing contact angles of ODI and ODT monolayers were found to be 113 and 117 degrees, respectively, suggesting a slight difference in structure between them. X-ray photoelectron spectroscopy revealed that SAMs of ODT were more stable than those of ODI, which was supported by experiments that probed desorption of these layers in prewarmed hexadecane. Cyclic voltammetry measurements indicated that both monolayer systems could diminish electron-transfer rates substantially, although ODT monolayers were more effective and robust than their ODI counterparts. The resistance of the SAMs to ion penetration differed in a similar way, and a microcontact-printed monolayer of ODT could protect the underlying Pt better in an HCl/Cl2-based etch process than the one formed from ODI.     

Systematic control of the packing density of self-assembled monolayers using bidentate and tridentate chelating alkanethiols

The structural and interfacial properties of self-assembled monolayers (SAMs) on gold derived from the adsorption of a series of 1,1,1-tris(mercaptomethyl)alkanes (i.e., CH3(CH2)mC[CH2SH]3, where m = 9, 11, 13, 15) were investigated. The new SAMs, which possess uniformly low densities of alkyl chains, were characterized by ellipsometry, contact angle goniometry, and polarization modulation infrared reflection absorption spectroscopy. Additional analysis of the SAMs by X-ray photoelectron spectroscopy permitted a direct calculation of the packing densities of the SAMs on gold. The results as a whole, when compared to those obtained on SAMs generated from normal alkanethiols (CH3(CH2)m+2SH), 2-alkylpropane-1,3-dithiols (CH3(CH2)mCH[CH2SH]2), and 2-alkyl-2-methylpropane-1,3-dithiols (CH3(CH2)mC(CH3)[CH2SH]2) having analogous chain lengths, demonstrate that the 1,1,1-tris(mercaptomethyl)alkanes afford SAMs with alkyl chains having the lowest packing density and least conformational order.     

Comparative electrochemical and impedance studies of self-assembled rigid-rod molecular wires and alkanethiols on gold substrates

A study of the charge transfer and self-assembly characteristics of two new rigid-rod molecular wires 1 and 2 assembled on polycrystalline gold electrodes was carried out using electrochemical impedance spectroscopy and cyclic voltammetry. This class of wires have precisely controlled (ca. 1.5-2.5 nm) lengths of π-conjugation, with extended HOMO and LUMO wavefunctions. While rotations can occur around the C-C single bonds, the molecules cannot isomerise or fold due to their rigid backbone structures. The behaviour of these wires was compared with SAMs of heptanethiol (HPT) and dodecanethiol (DDT). It was found that SAMs of 1, which bears flexible hexyloxy sidechains, had randomly distributed pinholes which show microelectrode behaviour even when diluted with DDT. SAMs of 2, which do not have any sidechains, were well-organised at open-circuit potentials enabling evaluation of electron transfer kinetics assuming an average film thickness. However, impedance studies show that deviations from open circuit potentials resulted in an exponential decrease in charge transfer resistance, whereas capacitance remained constant, possibly attributable to conformational changes of the SAM. The syntheses and characterisation of the molecules is described.     

Saccharide-functionalized alkanethiols for fouling-resistant self-assembled monolayers: synthesis, monolayer properties, and antifouling behavior

We describe the synthesis of a series of mono-, di-, and trisaccharide-functionalized alkanethiols as well as the formation of fouling-resistant self-assembled monolayers (SAMs) from these. The SAMs were characterized using ellipsometry, wetting measurements, and infrared reflection-absorption spectroscopy (IRAS). We show that the structure of the carbohydrate moiety affects the packing density and that this also alters the alkane chain organization. Upon increasing the size of the sugar moieties (from mono- to di- and trisaccharides), the structural qualities of the monolayers deteriorated with increasing disorder, and for the trisaccharide, slow reorganization dynamics in response to changes in the environmental polarity were observed. The antifouling properties of these SAMs were investigated through protein adsorption experiments from buffer solutions as well as settlement (attachment) tests using two common marine fouling species, zoospores of the green macroalga Ulva linza and cypris larvae of the barnacle Balanus amphitrite. The SAMs showed overall good resistance to fouling by both the proteins and the tested marine organisms. To improve the packing density of the SAMs with bulky headgroups, we employed mixed SAMs where the saccharide-thiols are diluted with a filler molecule having a small 2-hydroxyethyl headgroup. This method also provides a means by which the steric availability of sugar moieties can be varied, which is of interest for specific interaction studies with surface-bound sugars. The results of the surface dilution study and the low nonspecific adsorption onto the SAMs both indicate the feasibility of this approach.     

Chemical force microscopy of mixed self-assembled monolayers of alkanethiols on gold: evidence for phase separation

Mixed self-assembled monolayers formed by the coadsorption of hydroxyl- and methyl-terminated alkanethiols with similar chain lengths have been characterized by friction force microscopy. Friction coefficients have been determined by assuming a fit to Amonton's law. The friction coefficients vary linearly with the fraction of polar-terminated adsorbates in the self-assembled monolayer (SAM). With carboxylic acid-terminated tips, the coefficient of friction increases with the fraction of hydroxyl-terminated thiols, while with methyl-terminated tips it decreases. Similar trends are observed for pull-off forces, which increase and decrease as a function of the fraction of polar-terminated adsorbates for carboxylic acid- and methyl-terminated adsorbates, respectively. Analysis of histograms of adhesion forces has yielded insights into the phase structure of mixed SAMs. Single-component monolayers yield histograms that may be fitted to symmetric Gaussian distributions, irrespective of the nature of the terminal group on either the tip or the SAM. However, mixed monolayers yield broad, asymmetric distributions that could not be fitted with a Gaussian distribution. The best explanation for these data is that mixed SAMs of hydroxyl- and methyl-terminated alkanethiols of similar chain length form phase-separated structures.     

Odd-even effects in self-assembled monolayers of omega-(biphenyl-4-yl)alkanethiols: a first-principles study

Conjugated molecules with a saturated alkyl linker between a thiol docking group and the pi-conjugated core have been shown to form self-assembled monolayers (SAMs) with a high degree of long-range order and uniformity. Additionally, pronounced odd-even effects have been observed in a number of properties characterizing these SAMs. We focus on omega-(biphenyl-4-yl)alkanethiols with n = 0-6 -(CH2)n- units deposited on Au(111) and investigate the microscopic origin of these odd-even effects in terms of the local sulfur-gold bonding geometry by employing first-principles calculations. An additional structural parameter, the torsion angle between the two phenyl rings in the biphenyl moiety, is identified and its relation to the experimentally observed odd-even effects is discussed. More importantly, we address relevant quantities for the application of these SAMs in molecular electronic devices, in particular, the modification of the work function of the underlying metal substrate and the energetic alignment of the molecular orbitals in the SAM with the Fermi level. While no clear trend emerges for the former, we find pronounced odd-even effects for the latter. Furthermore, the insertion of a single methylene unit between the biphenyl core and the thiol appears to largely decouple the valence electronic systems of the pi-conjugated segment and the gold substrate. Our results thus provide a solid theoretical basis for the interface energetics in this important class of systems.     

Directed, selective insertion of single molecules into patterned self-assembled monolayers of alkanethiols with different chain lengths

Pd(ii) pincer adsorbate molecules (1) were inserted into self-assembled monolayers (SAMs) of alkanethiols with different chain lengths (C(8) to C(18)) on annealed gold substrates. Their presence was brought to expression by reaction of with Au nanoclusters bearing phosphine moieties (2). The surface-confined Au nanoclusters were observed only on the shorter chain SAMs (C(8)SH to C(16)SH) and not on C(18)SH SAMs. This is attributed to the longer chain length of C(18)SH preventing the insertion of pincer molecules. Microcontact printing (microCP) with C(18)SH on unannealed gold substrates and the subsequent immersion of the substrates into C(8)SH, C(10)SH, C(12)SH, or C(16)SH solutions, yielded a series of patterned SAMs that have areas of thiols of different chain lengths. Insertion of 1 followed by expression using 2, or insertion of 3 showed inserted molecules only in the shorter chain SAM areas. The absolute particle densities in the former case were higher than on the corresponding homogeneous SAMs on annealed substrates, probably due to larger numbers of defects in the SAMs on unannealed substrates.     

Adsorption of ethoxylated cationic surfactants on self-assembled monolayers of alkanethiols on gold using surface plasmon resonance detection

Adsorption of a series of ethoxylated cationic surfactants at model surfaces of alkanethiol self-assembled monolayers was studied by the surface plasmon resonance technique. Model surfaces were tailor-made by choosing alkanethiols or mixtures of alkanethiols with methyl, hydroxyl, carboxyl, and trimethylammonium groups in terminal position. The ethoxylated and quaternized cationic surfactants having from 2 to 18 oxyethylene units, showed a decrease in adsorbed amount with increasing oxyethylene chain length for both hydrophobic and hydrophilic surfaces. On a negatively charged surface, containing carboxylate groups, the surfactant with only two oxyethylene groups adsorbed strongly due to electrostatic attraction and the adsorption increased with increasing amount of surface carboxylate groups. This work shows the usefulness of self-assembled alkanethiols on gold as a tool for performing surfactant adsorption studies on surfaces with variable hydrophobicity and charge.     

Interfacial structure in thin water layers formed by forced dewetting on self-assembled monolayers of omega-terminated alkanethiols on Ag

A method for the spectroscopic characterization of interfacial fluid molecular structure near solid substrates is reported. The thickness and interfacial molecular structure of residual ultrathin D20 films remaining after forced dewetting on alkanethiolate self-assembled monolayers (SAMs) of 11 1-mercaptoundecanoic acid (11-MUA), 11-mercaptoundecanol (11-MUD), and undecanethiol (UDT) on Ag are investigated using ellipsometry and surface Raman spectroscopy. The residual film thickness left after withdrawal is greater on hydrophilic SAMs than on hydrophobic SAMs. This behavior is rationalized on the basis of differing degrees of fluid slip within the interfacial region due to different interfacial molecular structure. The v(O-D) regions of surface Raman spectra clearly indicate unique interfacial molecular properties within these films that differ from bulk D20. Although the residual films are created by shear forces and Marangoni flow at the three-phase line during the forced dewetting process, the nature of the films sampled optically must also be considered from the standpoint of thin film stability after dewetting. Thus, the resulting D20 films exist in vastly different morphologies depending on the nature of the water-SAM interactions. Residual D20 is proposed to exist as small nanodroplets on UDT surfaces due tospontaneous rupture of the film after dewetting. In contrast, on 11-MUD and 11-MUA surfaces, these films exist in a metastable state that retains their conformal nature on the underlying modified surface. Analysis of the peak intensity ratios of the so-called "ice-like" to "liquid-like" v(O-D) modes suggests more ice-like D20 character near 11-MUD surfaces, but more liquid-like character near 11-MUA and UDT surfaces. The creation of residual ultrathin films by forced dewetting is thus demonstrated to be a powerful method for characterizing interfacial molecular structure of fluids near a solid substrate under ambient conditions of temperature and pressure.     

Entrapment of photosystem I within self-assembled films

We have developed a process to incorporate an integral membrane protein, Photosystem I (PSI), into an organic thin film at an electrode surface and thereby insulate the protein complex on the surface while mimicking its natural environment. The PSI complex, which is primarily more hydrophobic on the exterior than interior, is hydrophobically confined in vivo within the thylakoid membrane. To mimic the thylakoid membrane and entrap PSI on an electrode, we have designed a series of steps using a thin self-assembled monolayer (SAM) to adsorb and orient PSI followed by exposures to longer-chained methyl-terminated alkanethiols that place exchange with components of the original SAM in the interprotein domains. In this process, PSI is first adsorbed onto a HOC(6)S/Au substrate through a short exposure to a dilute solution of the protein to achieve a protein coverage of approximately 25%. The PSI/HOC(6)S/Au substrate is then placed into a solution containing one of various longer-chained alkanethiols including C(22)SH or C(18)OC(19)SH. Changes in thickness, interfacial capacitance, infrared spectra, and surface wettability were used to assess the extent of backfilling by the long-chained thiols. The coverage of the protein layer and the solvent used for backfilling affected the rate and quality of the SAM formed in the interprotein regions. After exposure of the PSI layer to solvents containing alkanethiols, there was only minor loss of protein on the surface and no real change in protein secondary structure as evidenced by reflectance absorption infrared spectroscopy.     

Blue luminescence induced by confinement in self-assembled films

The fabrication and characterization by means of photoluminescence (PL), UV-vis absorption, electro-luminescence (EL) and X-ray reflectivity of multilayer heterostructures consisting of alternate layers of conjugated and non-conjugated polymers have been studied. The heterostructures are prepared by the layer-by-layer self-assembly technique, using two types of polyelectrolytes. The first are precursors of conjugated polymers such as poly(phenylenevinylene) (PPV) and other poly(arylenevinylene) polymers, and the second are non-conjugated polymers such as poly(styrene-4-sulfonate) (SPS), polyacrylic acid (PAA) and poly(allylamine hydrochloride) (PAH). The heterostructures consist of a repeated sequence of bilayers (layer pair) or multilayers, where the conjugated polymer is formed by heat treatment under vacuum. The thickness of each bilayer or multilayer was controlled by changing the non-conjugated polymer layer. Most importantly, we have found that the PL and EL spectral emissions can be ‘tuned’ by a proper ‘design’ of the heterostructure. Particularly, heterostructures in which the bilayer thickness is rather small and the electroluminescent layers are practically in contact show a blue shift upon decreasing the thickness of the assembly for ultrathin assemblies. In contrast, for assemblies where the electroluminescent layers are well separated by one or several non-conjugated layers (polyelectrolyte spacers), the emission is in the blue and independent of the assembly thickness (number of bilayers). We interpret the results as being due to confinement effects. Using this assembly technique, we were able to fabricate light emitting diodes (LEDs) which emit in the blue region.     

Comparison of the anchoring of nematic liquid crystals on self-assembled monolayers formed from semifluorinated thiols and alkanethiols

The anchoring of nematic liquid crystals on self-assembled monolayers (SAMs) formed by the chemisorption of semifluorinated thiols or alkanethiols on gold is compared and contrasted. The planar anchoring of 4-n-pentyl-4-cyanobiphenyl (5CB) observed in the past on SAMs formed from alkanethiols is also observed on SAMs formed from semifluorinated thiols. The azimuthal anchoring of 5CB, however, differs on these two types of surfaces: nematic 5CB anchored on SAMs formed from alkanethiols has a grainy appearance due to the formation of domains with sizes 10 mum whereas 5CB forms large domains ( 100 mum) with diffuse branches emerging from defects of strength 1/2 when anchored on SAMs formed from semifluorinated thiols. Mixed (two-component) SAMs formed from either short and long semifluorinated thiols or short and long alkanethiols cause homeotropic anchoring of 5CB. We discuss these results in light of the known differences in the structure of SAMs formed from alkanethiols and semifluorinated thiols, i.e. the tilt of the chains and conformational freedom (flexibility) of the chains within these SAMs.