原癌基因c-myc启动区G-四链体结构及靶向小分子配体

随着DNA G-四链体结构的发现和现代分子生物学技术对其与癌症关系的揭示,DNA G-四链体逐渐成为抗肿瘤药物研究的新靶点。c-myc启动区 G-四链体由于在细胞生长、增殖、凋亡、衰老及肿瘤形成等过程中的重要作用,成为DNA G-四链体中最受关注的序列之一。本文旨在对c-myc启动区 G-四链体的结构及靶向c-myc G-四链体的小分子配体的研究进展进行综述。首先,介绍c-myc G-四链体的生物学意义;其次,对几种常用的c-myc G-四链体的结构进行解析;最后,对以c-myc为靶点的小分子配体的研究进展及其与G-四链体的作用模式进行综述,并对目前以c-myc G-四链体为靶点、已经走向临床实验的CX-3543的开发与作用机制进行介绍。     

靶向G-四链体的小分子配体在癌症治疗中应用的研究进展

G-四链体是一类由Hoogsteen氢键维持稳定的,富含鸟嘌呤的DNA或RNA二级结构。人类基因组中存在大量潜在的形成G-四链体的序列,所形成的G-四链体结构能够调控基因组的稳定性、DNA复制和基因表达,其中包括很多与癌症相关基因。因此寻找能够诱导DNA的G富集区域形成G-四链体结构的配体,进而筛选潜在抗癌药物的先导化合物,已成为癌症治疗研究的热点之一。本文对近年来发现和设计的以G-四链体为靶点的小分子配体,按照靶向的G-四链体结构类型和配体的分子结构进行分类,综述了这类化合物在癌症治疗方面的研究进展,分析了相关靶向治疗存在的问题,并对未来的研究方向进行了展望。     

DNA G-四链体识别探针研究进展

G-四链体是一种由富含鸟嘌呤核酸序列形成的独特的二级结构,广泛分布于真核生物基因组,如端粒DNA、r DNA和一系列基因中的启动子区域。G-四链体结构对很多重要的生理过程如基因的转录、复制、重组以及保持染色体的稳定性方面具有重要作用。G-四链体的特异、高灵敏检测将为进一步了解G-四链体结构在人类细胞基因组中的分布、功能和机制奠定基础,也可能为靶向G-四链体的肿瘤治疗方法提供新的思路。因而过去几十年人们一直致力于开发设计具有高选择性和高灵敏度的G-四链体识别探针,这些探针已经广泛应用于溶液中G-四链体的识别,而且具有良好的选择性。目前也有少数探针能够直接用于检测活体G-四链体结构。本文综述了一些常见的靶向G-四链体的小分子配体,以及它们在染色体和活体细胞G-四链体检测中的应用。笔者希冀本文能为设计识别G-四链体的高性能探针,进一步实现活细胞内G-四链体的检测提供借鉴。     

以G-四链体为靶点的小分子端粒酶抑制剂研究进展

富含鸟嘌呤碱基的DNA序列能够通过鸟嘌呤环的互联作用形成四链螺旋结构,这种结构被称为G-四链体。G-四链体由于能够抑制端粒酶的活性而成为抗肿瘤药物的新靶点,能促使G-四链体形成或稳定该结构的物质则可能对癌症有潜在的治疗意义。本文对以G-四链体为靶点的小分子端粒酶抑制剂的研究进行了综述。     

钌配合物与G-四链体DNA的相互作用研究进展

人体端粒由富含鸟嘌呤(G)的DNA重复序列组成,该序列在一定条件下可以形成G-四链体DNA结构。小分子化合物诱导该结构的形成并使之稳定,可以抑制端粒酶活性而达到抗肿瘤的目的。因此,G-四链体DNA稳定剂的设计和筛选是近年来生物无机化学的重要前沿研究领域之一。在金属配合物中,钌配合物由于具有丰富的光化学、光物理特性以及生物活性,其作为G-四链体DNA稳定剂引起人们的高度关注。本文以近年一些代表性的研究工作为例,对钌配合物与G-四链体DNA相互作用方面的研究进展进行了综述。     

DNA G-四链体的结构完整性对催化性质的影响

DNA酶中的G-四链体-血红素(G4-hemin)DNA酶结构具有较高的设计性和化学稳定性,因此格外受研究者关注.G-平面作为辅酶因子hemin的结合位点,不仅提供大π平面与hemin结合,而且其平面上的G碱基还可以充当近端配位基团与hemin进行配位.因此,研究G-平面完整性在G4-DNA酶体系中的作用具有重要意义....     

电喷雾质谱法研究天然产物小分子识别人类端粒G-四链体及复合物的热稳定性

利用电喷雾质谱(ESI-MS)研究了12种天然产物小分子与人类端粒G-四链体结构的非共价相互作用和识别功能, 比较了不同小分子与人类端粒G-四链体的结合强弱, 发现了一种新的识别小分子——防己诺林碱对人类端粒G-四链体有很好的结合. 通过质谱升温实验比较了小分子结合对G-四链体热稳定性的影响, 防己诺林碱的结合使G-四链体的离子的解离温度(T1/2)上升到200 ℃. 利用分子模拟对G-四链体DNA与小分子结合的模式以及稳定性进行了探讨, 给出了防己诺林碱可能的结合位点和结合模式, Autodock计算出来的结合能约为-31.5 kJ·mol-1. 同原来的平面型分子不同, 防己诺林碱是一类新型结构的分子, 为设计合成新型G-四链体识别分子提供了新的结构模型.     

邻菲罗啉衍生物与G-四链体DNA的识别

设计合成了一种新型邻菲罗啉衍生物,用IR,<'1>H-NMR,<'13>C-NMR和质谱进行了结构表征.在包含100mM NaCl的Tris-HCl(pH 7.4)缓冲溶液中,利用荧光共振能量转移熔点(FRET-melting)分析以及紫外可见光谱研究了此化合物对人端粒G-四链体DNA(AG<,3>T<,2>AG<,3...     

基于G-四链体结构多态性的核酸纳米技术

G-四链体是由富G核酸形成的独特四链螺旋结构,区别于遵循A-T、G-C碱基互补配对原则形成的传统Watson-Crick双链结构.基于G-四链体的特异分子识别特性,能够引导纳米粒子的有序组装、赋予纳米器件以刺激一响应功能,使得核酸纳米技术领域的内容更丰富多样.本文介绍了G-四链体的结构多态性,从纳米材料组装和纳米器件设...     

Determination of cationic polyelectrolytes using a photometric titration with crystal violet as a color indicator

The reaction of the cationic dye, crystal violet (CV) with the anionic polyelectrolytes such as potassium poly (vinyl sulfate) (PVSK) results in a decrease of the absorbance of CV at the maximum absorption wavelength (590 nm). This change of the absorption spectra of the CV has been already applied to the determination of anionic polyelectrolytes using flow injection analysis method. In this paper, CV was applied to the indicator for the determination of cationic polyelectrolytes such as poly (diallyldimethylammonium chloride) (Cat-floc) by photometric titration, using a PVSK solution as a titrant. The end-point of the titration is detected as the break point of the titration curve. A linear relationship between the concentration of cationic polyelectrolyte and the end-point volume of the titrant exists in the concentration range from 0 to 5×10⁻⁵ eq. mol dm⁻³ for Cat-floc, glycol chitosan and methylglycol chitosan. The effects of the concentration of CV and coexisting electrolytes in the sample solution and the effect of pH of the sample solution on the degree of the change of absorbance at the end-point were also examined.     

用结晶紫测定DNA 的分光光度法

研究了结晶紫与ＤＮＡ的可见吸收光谱和提出了测定ＤＮＡ的分光光度法。在ｐＨ９．５６的条件下,加入ＤＮＡ后结晶紫在５８９ｎｍ的最大吸收峰强度显著下降,下降程度与ＤＮＡ的含量呈线性关系,确定了实验的最佳条件,ＤＮＡ线性响应范围为０～５ｍｇ／Ｌ,检出限１９．５μｇ／Ｌ。该法简便,快速,具有较高的选择性,对合成样品中ＤＮＡ的测定结果令人满意。     

Controlled crystal phase and particle size of loaded-TiO2 using clinoptilolite as support via hydrothermal method for degradation of crystal violet dye in aqueous solution

TiO₂-supported clinoptilolites (TiO₂/clinoptilolites) were successfully synthesized with controlled crystal phase and particle size via hydrothermal method to enhance photocatalytic performance of TiO₂. The effects of various parameters including temperature, acidity and concentration of Ti-containing solutions on the particle size, crystal phase and agglomeration of TiO₂ supported on clinoptilolite were investigated thoroughly by characterizations of X-ray diffraction (XRD), Fourier transform infrared (FT-IR) spectroscopy, scanning electron microscope (SEM), transmission electron microscope (TEM), BET isotherm, UV–visible (UV–vis) spectrophotometer and Malvern zetasizer. The results demonstrate that increasing temperature and strengthen acidity are beneficial to enhance the crystallinity and particle size of supported TiO₂. Increase in acidity also leads to more uniform distribution of TiO₂ on the surface of clinoptilolite. The TiO₂ nano-crystals deposited on the surface of clinoptilolite, exhibit rutile or anatase phase, strongly depending on the preparation procedure. The resultant TiO₂/clinoptilolites could be used as photo-catalysts for the degradation of crystal violet (CV) dye in aqueous solution, showing a higher photo-catalytic activity with 89% degradation within 100 min. The effect of operational parameters, such as pH values of reaction media, dose of used catalyst, and concentration of CV dye on the CV degradation performance were investigated, in which the kinetics of CV dye degradation was found to follow the pseudo-first order kinetic model.     

Adsorption of crystal violet dye from aqueous solution using mesoporous materials synthesized at room temperature

In this work, batch adsorption experiments are carried out for crystal violet dye using mesoporous MCM-41 synthesized at room temperature and sulfate modified MCM-41 prepared by impregnation method using H₂SO₄ as sulfatising agent. The surface characteristics, pore structure, bonding behavior and thermal degradation of both the MCM-41 samples are characterized by nitrogen adsorption/desorption isotherms, X-ray diffraction (XRD) patterns, Fourier transform infrared (FT-IR) spectroscopy and thermo gravimetric analysis (TGA). The adsorption isotherm, kinetics and thermodynamic parameters are investigated for crystal violet (CV) dye using the calcined and sulfated MCM-41. Results are analysed using Langmuir, Freundlich and Redlich-Peterson isotherm models. It is found that the Freundlich model is an appropriate model to explain the adsorption isotherm. The highest adsorption capacity achieved is found to be 3.4×10⁻⁴ mol g⁻¹ for the sulfated MCM-41. The percentage removal of crystal violet dye increases with increase in the pH for both the MCM-41 adsorbents. Kinetics of adsorption is found to follow the second-order rate equation. From the thermodynamic investigation, it is evident that the adsorption is exothermic in nature.     

浊点萃取-分光光度法测定水样中痕量结晶紫

提出了浊点萃取-分光光度法测定水样中结晶紫的新方法,研究了非离子表面活性剂Triton X-114浊点萃取的最佳条件,如pH、试剂用量、平衡时间和温度等。结晶紫的最大吸收波长为579 nm,标准曲线的线性范围是32～700 ng/mL,检出限是9.8 ng/mL,富集倍率为20。结晶紫的浓度在0.2和0.5μg/mL时的相对标准偏差分别为2.5%和1.7%(n=8)。应用本方法测定水样中的痕量结晶紫,平均回收率95.2%～98.1%。     

The ultratrace detection of crystal violet using surface enhanced Raman scattering on colloidal Ag nanoparticles prepared by electrolysis

Highly active,stable and affordable surface enhanced Raman scattering(SERS) substrates were obtained by electrolyzing a mixture of AgNO_3(4×10~(-4) mol/L) and Na_3C_6H_5O_7·H_2O(6×10~(-5) mol/L) for 1,2,3 and 4h at 7V.With crystal violet(CV) as a test molecule,a portable Raman spectrometer with 785 nm laser excitation was employed to carry out the SERS detection.Colloidal Ag nanoparticles prepared by electrolyzing for 3 h with the particle size of(65±17) nm is a perfect SERS substrate for the ultratrace ...     

Unpredictable adsorption and visible light induced decolorization of nano rutile for the treatment of crystal violet

Photocatalysts containing different ratios of anatase and rutile are prepared via heat treatment of Degussa P-25 titania. X-ray diffraction (XRD), Bruuauer-Emmett-Teller (BET), ultraviolet–visible light diffuse reflectance spectra (DRS), Raman spectra (Raman), positron annihilation lifetime spectra (PAL) and temperature-programmed desorption (TPD) are applied to investigate the phase composition of the synthesized catalysts. Using crystal violet (CV) as the target pollutant, the unexpected visible light decolorization of rutile is observed. Despite the decreased specific surface area, the as-synthesized rutile samples exhibit much higher adsorption capability of CV than P-25 does, which in turn leads to improved photoreaction efficiency. Since the rutile samples can't absorb the visible light, the degradation under visible light irradiation is attributed to self-sensitization of CV on the surface of rutile.     

Catalytic action of CTAB/KBr/C9OH micellar media on the basic hydrolysis of crystal violet

The kinetics of basic hydrolysis of crystal violet (CV) in CTAB/KBr/C₉OH micellar media was investigated under pseudo-first-order conditions. The reaction was monitored spectrophotometrically by measuring the decrease in absorbance of CV at 590?nm. It was observed that the pseudo-first-order rate constant increases with increase in C₀. The enhancement of reaction rate with C₀ is explained on the basis of dependence of reaction rate on micellar morphology. Further, the viscosity and DLS analysis supports nonanol-induced morphological transitions. Fluorescence spectroscopy has been used to understand dye–micelles interactions. The enhancement of fluorescence intensity of CV with C₀ suggests an increase in dye–micelles interaction with C_0. The concentration of surfactant and salt had a marked effect on reaction rate. The inhibition of reaction rate at high concentration of surfactant and salt is due to the ionic competition of OH^? and Br^? ions for the reaction center. The influence of [OH^?] on CV hydrolysis was also investigated. The results show that the pseudo-first-order rate constant, k’, increases linearly with hydroxide ion concentration, indicating first-order dependence on [OH^?].     

Synthesis and properties of oil-soluble butyl crystal violet lactone

A novel compound of butyl crystal violet lactone (BCVL) has been prepared by oxidizing leuco butyl crystal violet lactone (LBCVL), which was obtained by the mixture of N,N-dibutylaniline, p-(dibutylamino) benzaldehyde and methyl-m-(dibutylamino) benzoate. The structure of BCVL was characterized by ¹H-nuclear magnetic resonance (NMR), infrared (IR), and mass spectrometry (MS). The color of BCVL can change reversibly in some acid or alkali solvents. The result of the dissolution experiment showed that solubility of BCVL in organic solvent was improved compared with crystal violet lactone (CVL). Translated from Journal of Fudan University (Natural Science), 2006, 45(3): 375–379 [译自: 复旦学报(自然科学版)]     

Study of the concentration and separation of cadmium with microcrystalline phenolphthalein modified by crystal violet

A new method for cadmium separation and concentration with microcrystalline phenolphthalein modified by crystal violet (CV) was developed in the paper. In the presence of potassium iodide (KI) and CV, cadmium are quantitatively absorbed on microcrystalline phenolphthalein in the pH range 1.0-6.0 as the forms of water-insoluble ion-associated complexes (CdI₃⁻)·(CV⁺) and (CdI₄²⁻)·(CV⁺)₂. Effect of different parameters such as phenolphthalein amount, stirring time, the concentration of CV and KI, various salts and metal ions was studied in detail. During the present study, a significant enhancement of the extraction of cadmium was observed. Cd(II) can be completely separated from Zn(II), Fe(II), Co(II), Ni(II), Mn(II), Cr(III) and Al(III) in this microcrystalline system and well concentrated without the interference of these metal ions at high level. The possible reactive mechanism of cadmium concentration has been discussed. Analytical results obtained by this new method were very gratifying.